| Literature DB >> 35560233 |
Déborah Mathis1, Joanne Croft2, Petr Chrastina3, Brian Fowler4, Christine Vianey-Saban5, George J G Ruijter6.
Abstract
External quality assurance (EQA) is crucial to monitor and improve the quality of biochemical genetic testing. ERNDIM (www.erndim.org), established in 1994, aims at reliable and standardized procedures for diagnosis, treatment and monitoring of inherited metabolic disease (IMD) by providing EQA schemes and educational activities. Currently, ERNDIM provides 16 different EQA schemes including quantitative schemes for various metabolite groups, and interpretive schemes such as diagnostic proficiency testing (DPT). DPT schemes focus on the ability of laboratories to correctly identify and interpret abnormalities in authentic urine samples across a wide range of IMDs. In the DPT schemes, six samples each year are distributed together with clinical information. Laboratories choose and perform the tests needed to reach a diagnosis. Data were collected on 345 samples, distributed to up to 105 laboratories worldwide. Diagnostic proficiency (the % of total points possible for all participating laboratories within a scheme for analysis and interpretation) ranged widely: amino acid disorders (n = 20), range 33%-100%, mean 84%; organic acid disorders (n = 35), range 14%-100%, mean 84%; lysosomal storage disorders (n = 13), range 20%-97%, mean 73%; purine/pyrimidine disorders (n = 9), range 37%-100%, mean 70%; miscellaneous disorders (n = 8), range 17%-100%, mean 65%; no IMD, range 65%-95%, mean 85%. When a sample with the same disorder was distributed in a subsequent survey, performance improved in 75 cases with no improvement seen in 32, suggesting overall improvement of performance. ERNDIM diagnostic proficiency testing is a valuable activity which can help to assess laboratory performance, identify methodological/technical challenges, be informative during quality audits and contribute to a better clinical appreciation of diagnostic uncertainty.Entities:
Keywords: ERNDIM; diagnostic testing; external quality assurance; inborn error of metabolism; inherited metabolic disease; proficiency
Mesh:
Year: 2022 PMID: 35560233 PMCID: PMC9540881 DOI: 10.1002/jimd.12523
Source DB: PubMed Journal: J Inherit Metab Dis ISSN: 0141-8955 Impact factor: 4.750
Key organizational data of ERNDIM diagnostic proficiency testing (DPT) schemes
| Centers organizing DPT schemes | Czech Republic (CZ) |
| France (F) | |
| Netherland (NL) | |
| Switzerland (CH) | |
| United Kingdom (UK) | |
| Number of labs per scheme (2020) | 19–22 |
| Total number of labs participating (2020) | 105 |
| Analysis portfolio needed |
Organic acids Amino acids Purines and pyrimidines Mucopolysaccharides Oligosaccharides |
| Total samples per year | Six samples arranged in two circulations of three samples. One sample is common to all five schemes |
| Scoring system |
Two points for analytical performance Two points for interpretation and recommendation for further tests Total of four points per sample |
| Analytical performance (%) | Percentage of points for analytics obtained across all labs of the scheme |
| Interpretational performance (%) | Percentage of points for interpretation and advice for further testing obtained across all labs of the scheme |
| Overall performance (%) | Percentage of points overall (analytics + interpretation) obtained across all labs of the scheme |
Collated proficiency data from 2006 to 2020 over five DPT schemes with change of proficiency in redistributed samples in subsequent survey(s)
| Disorders detected with amino acid analysis (20) |
| Proficiency (%) | Δ proficiency on repeat | |||||
|---|---|---|---|---|---|---|---|---|
| Range | Mean | CZ | F | NL | CH | UK | ||
| Alpha‐amino adipic semialdehyde synthase (AASS) deficiency | 1 | 85 | 85 | |||||
| Arginase deficiency | 2 | 87–92 | 90 | |||||
| Argininosuccinate lyase (ASL) deficiency | 13 | 72–100 | 88 | +15/+16 | +27 | −1 | +20/+12/+25 | +5/+7 |
| Branched‐chain aminoaciduria (MSUD) | 5 | 83–100 | 92 | −13/−6 | +8 | +3 | ||
| Citrullinaemia type 1 | 5 | 94–99 | 97 | +6 | +4/+1 | +1/+2 | ||
| Cystinuria (cystine/dibasic aminoaciduria) | 8 | 89–100 | 95 | −11/−1 | +2 | +7 | ||
| Formiminoglutamic (FIGLU) aciduria (educational: | 3 | 33–46 | 37 | +13 | ||||
| Hartnup disease | 2 | 76–93 | 85 | |||||
| HHH syndrome (treated with citrulline) | 6 | 50–84 | 71 | −7 | +5 | −4/+10 | +25 | |
| Homocystinuria due to CBS deficiency | 7 | 72–97 | 88 | +21 | +4 | +6 | +8 | |
| Hypermethioninemia due to methionine S‐adenosyltransferase (MAT) deficiency | 2 | 62–76 | 69 | |||||
| Hyperprolineamia type 2 | 1 | 77 | 77 | |||||
| Hypophosphatasia | 6 | 51–100 | 81 | +27 | −17 | 0 | ||
| Lysinuric protein intolerance (LPI) | 5 | 80–97 | 89 | +1 | −9 | +10/+15 | ||
| Non‐ketotic hyperglycinaemia (NKH) | 2 | 87–98 | 92 | |||||
| Ornithine aminotransferase (OAT) deficiency | 5 | 92–100 | 94 | +10 | ||||
| Ornithine transcarbamylase (OTC) deficiency | 3 | 77–86 | 81 | |||||
| Phenylketonuria (PKU) | 4 | 87–100 | 97 | −12/−3 | +1 | |||
| Prolidase deficiency (iminodipeptiduria) | 9 | 48–86 | 71 | +38 | +9/+11 | −6 | ||
| Tyrosinaemia type 1 | 2 | 90–98 | 93 | |||||
| Total | 91 | 33–100 | 84 | |||||
Disorder circulated as common sample in all five DPT schemes.
Overall proficiency of the common samples in the different DPT schemes
| Year | Diagnosis | Overall proficiency (%) | Mean | Range | Δ range | ||||
|---|---|---|---|---|---|---|---|---|---|
| CZ | F | NL | CH | UK | |||||
| 2012 | Branched chain aminoaciduria (MSUD) | 87 | 83 | 90 | 96 | 83 | 88 | 83–96 | 13 |
| 2013 | Lysinuric protein intolerance (LPI) | 93 | 88 | 89 | 93 | 82 | 89 | 82–93 | 11 |
| 2014 | HHH syndrome (treated with citrulline) | 62 | 80 | 80 | 70 | 50 | 68 | 50–80 | 30 |
| 2015 | Homocystinuria due to CBS deficiency | 88 | 96 | 84 | 88 | 89 | 89 | 84–96 | 12 |
| 2016 | Hyperoxaluria type 2 | 95 | 85 | 89 | 85 | 83 | 87 | 83–95 | 12 |
| 2017 | Citrullinaemia type 1 | 99 | 98 | 99 | 98 | 99 | 99 | 98–99 | 1 |
| 2018 | Dihydropyrimidine dehydrogenase (DPD) deficiency | 100 | 100 | 99 | 97 | 95 | 98 | 95–100 | 5 |
| 2019 | Adenine phosphoribosyltransferase (APRT) deficiency | 59 | 48 | 71 | 70 | 43 | 58 | 43–71 | 28 |
| 2020 | Phenylketonuria (PKU) | 98 | 95 | 95 | 99 | 100 | 97 | 95–100 | 5 |
| 2012–2020 | Mean proficiency | 87 | 86 | 88 | 88 | 80 | 86 | 80–88 | |
FIGURE 1The mean of overall proficiency across all schemes over the last 15 years shows a positive trend suggesting improvement in diagnostic testing.
FIGURE 2Improvement of diagnostic proficiency with repeated sampling in specific samples: (A) MNGIE/thymidine phosphorylase deficiency detected by purine and pyrimidine‐ and/or organic acid analysis; (B) aspartylglucosaminuria detected by amino acid‐ and/or oligosaccharide analysis.