| Literature DB >> 35558514 |
Lanyun Wang1, Yi Ding1, Wenjun Yang1, Hao Wang1, Jinjiang Shen1, Weiyan Liu2, Jingjing Xu3, Ran Wei1, Wenjuan Hu1, Yaqiong Ge4, Bei Zhang5, Bin Song1.
Abstract
Objective: The objective of this study is to develop a radiomics nomogram for the presurgical distinction of benign and malignant round-like solid tumors.Entities:
Keywords: breast; digital mammography; machine learning; radiomics nomogram; round-like tumors
Year: 2022 PMID: 35558514 PMCID: PMC9088007 DOI: 10.3389/fonc.2022.677803
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Features of 129 breast tumors confirmed by histology.
| Histopathologic type | No. of masses | Proportion (%) | No. of masses with calcifications | BI-RADS category of accompanying calcifications | |
|---|---|---|---|---|---|
| Benign | 51 | 39.5 | 0 | ||
| Fibroadenoma | 44 | 34.1 | 0 | ||
| Intraductal papilloma | 2 | 1.6 | 0 | ||
| Benign phyllodes tumor | 4 | 3.1 | 0 | ||
| Tubular gland lymphoma | 1 | 0.7 | 0 | ||
| Malignant | 78 | 60.5 | 5 | ||
| Invasive ductal carcinoma | 53 | 41.1 | 4 | 4a (3) | |
| 3 (1) | |||||
| Intraductal papillary carcinoma | 8 | 6.2 | 0 | ||
| Ductal carcinoma | 1 | 0.8 | 0 | ||
| Neuroendocrine carcinoma | 1 | 0.8 | 0 | ||
| Malignant phyllodes tumor | 3 | 2.3 | 0 | ||
| Mucinous carcinoma | 11 | 8.5 | 1 | 4a | |
| Sarcomatoid carcinoma | 1 | 0.8 | 0 | ||
No., number; BI-RADS, Breast Imaging Reporting and Data System.
Figure 1Flow chart of radiomic analysis of round-like masses on DM images.
Patient and DM/US characteristics.
| Characteristic | Pathological type |
| ||
|---|---|---|---|---|
| Benign | Malignant | |||
| Margin (DM) | circumscribed | 17 | 18 | 0.021* |
| obscured | 31 | 41 | ||
| microlobulated | 0 | 0 | ||
| indistinct | 3 | 19 | ||
| Density (DM) | low-density | 1 | 1 | 0.000* |
| equal-density | 41 | 34 | ||
| high- density | 9 | 43 | ||
| Location/Depth (DM) | anterior | 7 | 15 | 0.050* |
| middle | 35 | 38 | ||
| posterior | 9 | 25 | ||
| Echo pattern (US) | anechoic | 0 | 1 | 0.104 |
| hypoechoic | 49 | 64 | ||
| isoechoic | 1 | 1 | ||
| complex cystic and solid | 1 | 3 | ||
| heterogeneous | 0 | 9 | ||
| hyperechoic | 0 | 0 | ||
| Edge (US) | clear | 7 | 3 | 0.002* |
| partially clear | 43 | 58 | ||
| unclear | 1 | 17 | ||
| Shape (US) | regular | 6 | 3 | <0.001* |
| partially regular | 44 | 41 | ||
| irregular | 1 | 34 | ||
| Blood flow (US) | none | 22 | 13 | 0.001* |
| presence | 29 | 65 | ||
| Age # | 45 (41~52) | 60.5 (50.5~70) | <0.001* | |
| Size # | 1.9 (1.6~2.8) | 2.3 (1.6~3.225) | 0.158 | |
*means P<0.05; # means nonnormal distribution obtained after SK normality test; DM, digital mammography; US, ultrasound.
Positive results of univariate analysis for the differential diagnosis of round-like breast tumors.
| Variable | 2.5%CI | 97.5%CI | OR value |
|
|---|---|---|---|---|
| Age | 1.031 | 1.110 | 1.068 | 0.001* |
| Margin (DM) | 1.236 | 3.347 | 1.951 | 0.008* |
| Density (DM) | 2.010 | 13.221 | 4.917 | 0.001* |
| Location_Depth (DM) | 1.022 | 4.422 | 2.064 | 0.050 |
| Edge (US) | 2.335 | 51.850 | 8.197 | 0.005* |
| Shape (US) | 4.334 | 95.747 | 15.082 | 0.000* |
| Blood_flow (US) | 1.228 | 9.486 | 3.321 | 0.020* |
*means P<0.05; DM, digital mammography; US, ultrasound; CI, confidence interval; OR, odds ratio.
Positive results of multivariate logistic regression analysis for the differential diagnosis of round-like breast tumors.
| Variable | 2.50%CI | 97.50%CI | OR | P value |
|---|---|---|---|---|
| Location_Depth (DM) | 1.197 | 16.582 | 3.978 | 0.036* |
| Shape (US) | 1.900 | 57.442 | 7.969 | 0.013* |
| Age | 1.024 | 1.134 | 1.072 | 0.006* |
| Rad_score | 2.821 | 33.017 | 8.060 | <0.001* |
| Intercept | <0.001 | <0.001 | <0.001 | <0.001* |
*means P<0.05; DM, digital mammography; US, ultrasound; CI, confidence interval; OR, odds ratio.
Figure 2Selection of radiomics features and evaluation of the prediction performance of the radiomics signature. (A) Selection of the hyperparameter (λ) in the least absolute shrinkage and selection operator (LASSO) model via ten-fold cross-validation based on minimum error; vertical black dotted line, optimal value of λ (best fit). (B) Coefficients and log(λ) values; features with nonzero coefficients are shown. (C) The 13 features showing nonzero coefficients are displayed. The features utilized for constructing the radiomics signature are shown on the y-axis with the corresponding coefficients in LASSO Cox analysis on the x-axis. (D) Rad-scores of benign and malignant masses in the training and test groups. Yellow and blue represent the actual classification: the greater the separation of yellow and blue, the better the rad-score’s predictive accuracy. (E) Receiver operating characteristic (ROC) curves of the radiomics signature in the training and test set.
Figure 3Receiver operating characteristic (ROC) curves for the four classification machine learning models in the training set (A) and test set (B).
Figure 4Performance comparison of the four classification machine learning models in distinguishing benign from malignant masses.
Figure 5Radiomics nomogram for predicting malignant status of round-like tumors (A). Calibration curves of the radiomics nomogram in the training set (B) and test set (C).
Figure 6Receiver operating characteristic (ROC) curves for digital mammography, the clinical model, the radiomics signature and the radiomics nomogram in the training set (A) and test set (B).
Performances of the predictive models in distinguishing benign from malignant tumors.
| Model | Accuracy | Sensitivity | Specificity | PPV | NPV | |
|---|---|---|---|---|---|---|
| Training | DM | 0.670 (0.564-0.765) | 0.879 | 0.552 | 0.527 | 0.889 |
| Clinics | 0.791 (0.693-0.869) | 0.909 | 0.681 | 0.727 | 0.888 | |
| Radiomics | 0.835 (0.743-0.905) | 0.782 | 0.917 | 0.935 | 0.733 | |
| Combined | 0.890 (0.807-0.946) | 0.941 | 0.825 | 0.873 | 0.917 | |
| Test | DM | 0.684 (0.513-0.825) | 0. 923 | 0.56 | 0.522 | 0.933 |
| Clinics | 0.711 (0.541-0.846) | 1 | 0.577 | 0.522 | 1 | |
| Radiomics | 0.789 (0.627-0.904) | 0.696 | 0.933 | 0.941 | 0.667 | |
| Combined | 0.868 (0.719-0.956) | 0.95 | 0.778 | 0.826 | 0.933 |
DM, digital mammography; PPV, positive predictive value; NPV, negative predictive value.