Zhuwei Ruan1, Min Wang2, Chen Yang1, Lili Zhu1, Zhishan Su2, Ran Hong1. 1. CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Beijing 101419, China. 2. Key Laboratory of Green Chemistry and Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu, Sichuan 610064, China.
Abstract
Hinckdentine A, a marine-sponge-derived tribrominated indole alkaloid bearing a unique indolo[1,2-c]quinazoline skeleton, was completed in 12 steps featuring the construction of the Nα-quaternary carbon center by asymmetric azo-ene cyclization. A novel organocatalyst was developed to promote high-yielding tribromination, which represents a challenging process encountered in previous syntheses. Density functional theory calculations scrutinized viable substrates and deciphered the origin of the enhancement of C8 electrophilic bromination with a bifunctional organocatalyst. Moreover, the application of organocatalyst-enabled bromination on various substrates was demonstrated to highlight future late functionalizations of biologically intriguing targets.
Hinckdentine A, a marine-sponge-derived tribrominated indole alkaloid bearing a unique indolo[1,2-c]quinazoline skeleton, was completed in 12 steps featuring the construction of the Nα-quaternary carbon center by asymmetric azo-ene cyclization. A novel organocatalyst was developed to promote high-yielding tribromination, which represents a challenging process encountered in previous syntheses. Density functional theory calculations scrutinized viable substrates and deciphered the origin of the enhancement of C8 electrophilic bromination with a bifunctional organocatalyst. Moreover, the application of organocatalyst-enabled bromination on various substrates was demonstrated to highlight future late functionalizations of biologically intriguing targets.
Halogenated natural products
have been of utmost interest to the synthetic community because of
their fascinating biological activities.[1,2] Halogens have
been found to control metabolism and improve pharmacological properties,
such as bonding affinity, lipophilicity, and permeability.[3,4] One-third of the drugs currently in clinical application are halogenated,
such as antibiotic vancomycin, antimicrotubule cryptophycin A, and
antitumor rebeccamycin. Cognizant of the crucial role of halogens
in medicine, numerous efforts have been dedicated to the development
of effective halogenation reactions.[5−7] Among them, imitating
environmentally benign biohalogenation has been an enduring objective
for decades. Besides the proximity-guided regioselectivity to overcome
the intrinsic reactivities of specific substrates in enzymatic catalysis,
notably electrophilic halonium ions have been generated through leveraging
their reactivity with noncovalent interactions.[8−10] For instance,
in the mechanistic understanding of tryptophan 7-halogenase (RebH)
(Scheme ),[11−13] the protonated amine group of lysine plays a significant role to
activate hypohalous acid (HOX), a generally weak electrophilic reagent,
for halogenation at the requisite position by hydrogen bonding interactions.
Such alignment is perfectly settled through the confined architecture
of enzymes. However, probing biohalogenation by enabling catalysts
remains a formidable challenge.
Scheme 1
Flavin-Dependent Halogenation by RebH
(A) and Representative Late-Stage
Chemical Brominations (B)
Hinckdentine A was isolated by Blackman and co-workers from marine
bryozoan Hincksinoflustra denticulata as a unique screw-shaped and tribrominated indolo[1,2-c]quinazoline.[14−17] Although construction of such unprecedented skeleton remains to
be biosynthetically elucidated, synthetic endeavors have been devoted
to devise novel strategies to access the pentacyclic architecture.[18] McWhorter and Liu suggested a late-stage enzymatic
bromination of 2 to mimic the hypothetical biosynthesis
of hinckdentine A (1).[19] However,
such a tribromination event turned out to be extremely challenging
because the introduction of the third bromine at C8 with various bromine
reagents was unsuccessful. Kawasaki and co-workers disclosed an alternative
approach to define a reduced form, N5-Boc intermediate 3, as a suitable substrate for tribromination under mild conditions.[20] The succeeding contributions by Kitamura and
Fukuyama,[21] Zhu,[22] Xu,[23] and Cheon[24] decorated three bromines on different stages through development
of novel synthetic strategies.To expedite the substrate-defining
process for the challenging
bromination, we envisioned that a computational calculation could
be used to rationalize valid intermediates, including those that closely
resemble the precursor in the proposed biogenesis, that can participate
in the synthetic design of complex natural products.[25] The distinct reactivities of advanced intermediates 2 and 3 upon bromination prompted us to revisit
the origin of selectivity, both computationally and experimentally.
To simplify the mechanistic study, we defined the tangled bromination
at C8 as the reaction of interest. Therefore, dibrominated derivatives 4 and 5 (vide infra) were examined under Kawasaki’s
condition with N-bromosuccinimide (NBS). The reaction
mechanism involves a simplified sigma or condensed complex. As shown
in the energy profiles (Figure ), for 8-debromohinckdentine A (4) in McWhorter’s
synthesis,[19] C8-bromination occurred via
an unusual concerted mechanism, and the energy barrier for C8-bromination
was 40.8 kcal/mol, which indicated that it was extremely difficult
to brominate this position. In contrast to 4, C8-bromination
of 5, a proposed dibromine compound derived from Kawasaki
intermediate 3,[20] proceeded
via a conventional stepwise mechanism. Although the energy barrier
for the rate-determining step of the C–Br bond formation is
significantly lower than that of 4, the relatively high
Gibbs energy (ΔG = 28.2 kcal/mol) indicates
a dilemma in forming the Wheland intermediate (σ-complex) 5-C8-IM1, which is suspicious for the facile C8-bromination
in Kawasaki’s actual synthesis.[20]
Figure 1
Energy
profiles of noncatalytic C8-bromination of compound 2-derived dibromine 4 (3-derived 5) with NBS. The corresponding tribrominated products are
hinckdentin A (1) and 6. Calculations were
performed at the B3LYP-D3(BJ)/6-31G(d,p)(SMD,CH2Cl2) level of theory. The relative Gibbs free energies (ΔG) are given in kcal/mol. B-5-C8 (blue) represents
the bromination of substrate 5 at C8; TS, transition
state; IM, intermediate.
Energy
profiles of noncatalytic C8-bromination of compound 2-derived dibromine 4 (3-derived 5) with NBS. The corresponding tribrominated products are
hinckdentin A (1) and 6. Calculations were
performed at the B3LYP-D3(BJ)/6-31G(d,p)(SMD,CH2Cl2) level of theory. The relative Gibbs free energies (ΔG) are given in kcal/mol. B-5-C8 (blue) represents
the bromination of substrate 5 at C8; TS, transition
state; IM, intermediate.Despite that bromination
at different stages with various halogenases[26,27] or even a reversed process (debromination) is also possibly adapted
in nature,[28] the uncertainty in bromination
of 2 and 3 and those circumvented approaches
in the previous syntheses[24] prompted us
to revisit the key tribromination at the late stage of synthesis.
Such bioinspired execution by late-stage functionalization would offer
a unique opportunity to explore reactivity and method development
as well as future study on biological profile of derivatives.[29] As outlined in Scheme , the seven-membered lactam (caprolactam)
in 3 can be derived from enone 7 via a regioselective
Beckmann or Schmidt rearrangement. The essential Nα-quaternary
center spotlighted in many alkaloid syntheses[30] can be established via azo-ene cyclization[31−34] of the key azo species 9, which should be readily prepared from tetrasubstituted
alkene 10. Accordingly, two sequential palladium-catalyzed
coupling reactions are designed to merge three readily available fragments
(vida infra).
Scheme 2
Synthesis Plan of Hinchdentine A
The synthesis commenced with the α-arylation of
cyclohexanone 11 with 2-chloroiodobenzene in the presence
of Pd2(dba)3 and xantphos on a decagram scale
(Scheme ). The excess
amount of cyclohexanone 11 was readily recovered by treatment
with NaHSO3 during the workup stage. After transformation
of the corresponding
ketone 12 into triflate, subsequent Suzuki coupling of
boronate 13 proceeded smoothly to deliver tetrasubstituted
alkene 10 in excellent yield (86%). In the Nα-quaternary
stereogenic center, a racemic form was first realized by application
of Leblanc’s method.[32] To this end,
through treatment with triphosgene and immediate addition of hydrazine,
the resulting urea-derived hydrazine 14 was effectively
converted to the requisite Nα-quaternary center via oxidative
azo-ene cyclization with NBS/pyridine.[35] Cleavage of the N–N bond by zinc powder in acetic acid and
simultaneous deprotection of the ketal smoothly released enone 7 in 83% yield.
Scheme 3
Preparation of Advanced Intermediates 2 and 3
With a sufficient amount of enone 7 in hand, we first
examined the Beckmann rearrangement to furnish the caprolactam ring.[36,37] To our surprise, after treatment with hydroxylamine, subsequent
sulfonylation (such as Ts and Ms) failed to deliver the rearranged
product under various conditions. Alternatively, an acid-promoted
Schmidt rearrangement proved to be beneficial when methanesulfonic
acid (MsOH) was used, and an excellent yield (98%) of the requisite
lactam 16 was achieved on the gram scale. This high-yielding
regioselective Schmidt rearrangement of the enone circumvented a six-step
detour in previous synthesis.[21] To complete
the pentacyclic skeleton, tremendous efforts to screen phosphine ligands
had been explored, and the precatalyst arylpalladium(II) complex 17(38) proved to be essential to
enable intramolecular Buchwald–Hartwig amination. The structure
of the corresponding pentacyclic urea 18 was further
verified by long-range 1H–15N heteronuclear
shift correlation in NMR experiments.[39] The subsequent hydrogenation of the C4–C5 double bond generated
saturated lactam 19 with excellent stereoselectivity
(dr > 20/1). Complete reduction of the carbonyl group of the urea
into a methylene group with DIBAL-H provided 20 in excellent
yield.To construct a Nα-quaternary stereogenic center
in an asymmetric
manner, the key objective is defining a chiral auxiliary for azo-ene
cyclization. The pioneering work on asymmetric azo-ene reactions by
Brimble and co-workers[40,41] forged the potential inception
of this strategy. However, functional tolerance in the complex structures
and subsequent cleavage of the N–N linker remain elusive due
to the holistic adjustment of chiral auxiliaries for diastereomeric
induction, oxidative formation of azo compounds, and reaction feasibility
toward the following chiral auxiliary removal. Camphsultam 14a was proven to be a compromise to above scenarios and yielded 8a with good diastereoselectivity (dr 5/1) (Scheme ; also see Table S1). The direct cleavage of the N–N bond was
also found to be problematic using previously known methods.[42] Alternatively, removal of the chiral auxiliary
by hydrolysis was executed to deliver hydrazine 8b in
good yield. Subsequently, after screening extensive protocols, deamination
by nitrous acid[43] was found to be effective.
These two steps were further merged in one pot to deliver the requisite
(S)-enone 7 in good yield (67% for 8a to 7). Following the aforementioned synthetic
route in Scheme ,
pentacyclic compound (+)-20 was readily constructed in
a four-step sequence.
Scheme 4
Asymmetric Azo-Ene Cyclization to Access
(S)-20
During the removal of the benzyl group by hydrogenolysis of 20, the yield of amide 21 was varied due to contamination
of compound 2. To suppress the dehydrogenation, HCO2NH4 was defined as a surrogate for an effective
hydrogen source, and 21 was isolated in 85% yield. Interestingly,
using AcOH as the solvent, the addition of HCl (aqueous, 1.2 equiv)
for the debenzylation process delivered compound 2 with
a 95% yield, implicating that the protonation of aniline might facilitate
the dehydrogenation at C6 to form an imidazolidine motif. An alternative
route toward 21 was also devised by the facile reduction
of 2 by NaBH4. Following protection with the
Boc group, bis-Boc product 22 was first obtained, and
immediate treatment with Mg(ClO4)2[44] afforded mono-Boc-protected compound 3 in 98% yield.The advanced intermediates 2 and 3 were
then subjected to verify the bromination under previous conditions.[19,20] Compound 2 was then resumed using various equivalents
of NBS (Scheme ).
The bromines at C10 and C2 were readily installed (i.e., 4), and bromination at C8 was extremely difficult. The requisite tribrominated
product remained undetectable, even though excess NBS (∼8 equiv)
or strong brominated reagents (i.e., Br2) were utilized.
These unsuccessful entries implicated that C8-bromination of the hypothetical
biogenesis via 2 may require stepwise[26,27] or proximity-controlled halogenation to overcome the inherent reactivity,[11] posing an intriguing problem for future biosynthetic
studies. On the other hand, the availability of compound 3 in our unified route encouraged us to revisit another tribromination
event. Surprisingly, under the known conditions with 4 equiv of NBS
in THF,[20,23] the major product was C10-monobromo derivative 23 (82%), along with a small amount of C2,C10-dibrominated
derivative 5 (9%). No appreciable amount of tribromide 6 was detected (entry 1, Table 1 in Scheme ). Further extending the reaction time, increasing
the usage of brominating reagent, and enhancing the reaction temperature
resulted in a low isolated yield (14%) of 6, even when
mono and dibromo derivatives were consumed.[45] The relatively high Gibbs free energy in the transition state for
the C8-bromination of 5 with NBS (Figure ) concurred with our experimental results.
Scheme 5
Bromination of 2 and 3
The yields in Table 1 were
determined by 1H NMR (400 MHz, CDCl3) with internal
standard CH2Br2.
Bromination of 2 and 3
The yields in Table 1 were
determined by 1H NMR (400 MHz, CDCl3) with internal
standard CH2Br2.The
poor reproducibility of the original conditions[20] urged us to explore alternative approaches to
late-stage bromination. Given the Lewis-base-activated bromination,[46−54] we examined several Lewis bases, such as DMSO[52] and Et2S[47] (Table
1 in Scheme ).[45] Following Gustafson’s intriguing discovery,[55] tributylphosphine sulfide was examined and proved
to be effective in producing a 50% yield of tribromide 6. Further optimization defined triphenylphosphine sulfide (TPS) to
be superior for C8-bromination (58% yield) within a shorter reaction
time. During the bromination, we noticed a severe incapacitation of
the catalyst by hydrolysis of the phosphine sulfide–NBS complex
to phosphine oxide. To remedy this problem, we used 40 mol % of the
phosphine sulfide catalyst (relative to the substrate). For the TPS-promoted
C8-bromination of C2/C10 dibromine derivative 5, density
functional theory (DFT) calculations demonstrated that the relative
Gibbs energy of transition state 5-C8-TS1 (ΔG = 18.5 kcal/mol) (Figure S1)[45] in the C–Br bond formation
step was significantly lower than that for the condition using NBS
alone (B-5-C8-TS1, ΔG = 28.2 kcal/mol, Figure ). Consequently,
hydrogen transfer becomes the rate-determining step (ΔG = 19.0 kcal/mol). In the presence of a stronger bromination
reagent, that is, 1,3-dibromo-5,5-dimethylhydantoin (DBDMH), tribromide 6 was obtained in 80% yield.The success of bromination
of substrate 3 with DBDMH
encouraged us to evaluate the feasibility of structurally resembled
bis-Boc substrate 22. This notion supported the fact
that the optimal combination of DBDMH and TPS (40 mol %, relative
to the substrate) resulted in 87% isolated yield of tribromide 24 (entry 1, Table 2 in Scheme B). Further conversion revealed an intriguing dual
function of cerium ammonium nitrate, namely, deprotection of the Boc
group and concurrent dehydrogenation in a single step to complete
the total synthesis of hinckdentine A (1) (Scheme A). To achieve a high turnover
of the catalyst, 5 mol % of TPS was used, and the yield of given tribromide 24 deteriorated (32% in entry 2, Table 2 in Scheme ) due to the incapacitation
of the catalyst by hydrolysis of the phosphine sulfide–DBDMH
complex to phosphine oxide. Interestingly, N,N′-3,5-bistrifluoromethylphenyl thiourea (F-thiourea 25)[56] was also capable of promoting
dibromination to deliver 28,[57−59] although introducing
bromine at C8 remained incomplete due to the decomposition of the
catalyst itself (entry 3), indicating that the third bromination of 22 remains the required step for catalyst development.
Scheme 6
(A) Completion of (+)-Hinckdentine A (1), (B) Optimization
of Organocatalytic C8-Bromination of 22, and (C) Optimized
Geometries for Transition States in the C8-Bromination of 28 with Different Catalysts (Bond Lengths in Å and Relative Gibbs
Free Energies (ΔG) in kcal/mol)
Compound 22 (20
mg) in 1.5 mL of CH2Cl2 (0.026 M) at 0 °C,
1 h; DBDMH (4 equiv) was used as the bromination reagent.
All yields, except denoted, were
determined by 1H NMR (400 MHz, CDCl3) with internal
standard CH2Br2; C10-monobromo derivative 27 and C2,10-dibromo derivative 28 were isolated;
see the Supporting Information for details.
Isolated yield.
NBS (4 equiv) was used as the bromination
reagent.
The reaction was
run on the 0.04 M and 1 mmol scale.
(A) Completion of (+)-Hinckdentine A (1), (B) Optimization
of Organocatalytic C8-Bromination of 22, and (C) Optimized
Geometries for Transition States in the C8-Bromination of 28 with Different Catalysts (Bond Lengths in Å and Relative Gibbs
Free Energies (ΔG) in kcal/mol)
Compound 22 (20
mg) in 1.5 mL of CH2Cl2 (0.026 M) at 0 °C,
1 h; DBDMH (4 equiv) was used as the bromination reagent.All yields, except denoted, were
determined by 1H NMR (400 MHz, CDCl3) with internal
standard CH2Br2; C10-monobromo derivative 27 and C2,10-dibromo derivative 28 were isolated;
see the Supporting Information for details.Isolated yield.NBS (4 equiv) was used as the bromination
reagent.The reaction was
run on the 0.04 M and 1 mmol scale.In order
to further improve the efficacy of the organocatalyst
in tribromination, we envisioned that merging phosphine sulfide and
thiourea may further activate the bromination reagent, which in turn
decreases the energy barrier to enhance catalyst turnover. The use
of mixed catalysts indeed exhibited a significant improvement of tribromination
(entry 4). A new catalyst 26a bearing two adjacent activating
sites was thus prepared and subjected to the given transformation
(Table 2 in Scheme ). It was gratifying that a catalyst loading level as low as 5 mol
% in the presence of DBDMH was effective in achieving an excellent
yield (86%) for the targeted tribromide 24, which is
superior to the mixture use of Ph3P = S and 25 (entry 5 vs 4). Other catalysts 26b/c with
weaker hydrogen bond donors (Figure S4)[45] resulted in a deteriorated yield (entries 6
and 7). Using the thiourea catalyst, bromination with NBS was also
enhanced to 76% (entry 8). The reaction was readily scaled up, even
with 2.5 mol % (entry 9). Theoretically, the N5-Boc group can be leveraged
as an acceptor to perform dual hydrogen bonding with urea-like donor 26a in preorganized intermediate 28-C8-COM-b (Figure S4).[45] For
the TPS-promoted bromination of dibromo derivative 28, in the presence of DBDMH, the theoretical calculation suggested
facile formation of the Wheland intermediate via transition state 28-C8-TS1-a, with an energy barrier of only 4.4 kcal/mol (TS1-a
shown in Scheme C;
for details, see Figure S2).[45] The structural analysis of transition state 28-C8-TS1-b indicated that noncovalent interactions, including
a hydrogen bond between the bromonium ion and the thiourea moiety
as well as additional weak attraction, orient the substrate and strengthen
the electrophilicity of the bromonium ion, leading to a compact transition
state with lower relative Gibbs free energy (ΔG = 3.1 kcal/mol vs 4.4 kcal/mol of the parent TPS) (Scheme C and Figure S2).[45]To demonstrate the
application of organocatalyst 26a in halogenation of
biologically intriguing substrates, aromatic
compounds bearing various functional groups were evaluated with comparison
to TPS-catalyzed halogenations[55] and background
reaction by NBS or NCS only (“none” refers no catalyst)
(section A, Scheme ). Organocatalyst 26a generally exhibited superior reactivity
to TPS in terms of the conversion and isolated yield. For substrate 29m, a para-preference (rr 13/1; see the Supporting Information for details) was found with 26a and TPS, while ortho-bromination was obtained (rr 10/1) with NBS
only. The difference is also profound when selected pharmaceuticals
and natural products were examined in parallel. Notably, a wide range
of functionality are well-tolerated, including acids, amines, ketone,
furan, imidazole, and lactones. The brominated analogues of diclofenac,
clotrimazole, estrone methyl ether, gemfibrozil, metaxalone, xanthotoxin,
and naproxen were each accessed in excellent yield with this method
(section B, Scheme ). For the chlorination, the reactivity of 26a toward
gemfibrozil and naproxen was inferior to that of TPS, whereas it remains
a better catalyst for xanthotoxin (98% yield brsm). In terms of the
facile transformation of bromo compounds,[60] this new organocatalyst clearly provides an enabling approach to
late-stage modification and intermediate for further derivatization.
Scheme 7
Catalytic Halogenations for Various Substrates with 26a and TPS
Reactions were conducted with 0.1 mmol scale
of substrate and NBS or NCS (1.2 equiv) in CDCl3 (2 mL),
and the yield was determined by 1H NMR (400 MHz) using
CH2Br2 as an internal standard. The reactions
were generally repeated two or three times for reproducibility. The
catalyst loading (26a or TPS) was given in parentheses.
The yield for 30a–e and g with applying TPS as the
catalyst was adapted from ref (54).
The reaction
temperature is 0 °C.
DBDMH (1.2 equiv) was used as bromination reagent.
NBS or NCS (2.2 equiv) was used as halogenation
reagent.
The isolated yield
was given when xanthotoxin was applied in gram scale for bromination.
Catalytic Halogenations for Various Substrates with 26a and TPS
Reactions were conducted with 0.1 mmol scale
of substrate and NBS or NCS (1.2 equiv) in CDCl3 (2 mL),
and the yield was determined by 1H NMR (400 MHz) using
CH2Br2 as an internal standard. The reactions
were generally repeated two or three times for reproducibility. The
catalyst loading (26a or TPS) was given in parentheses.The yield for 30a–e and g with applying TPS as the
catalyst was adapted from ref (54).The reaction
temperature is 0 °C.DBDMH (1.2 equiv) was used as bromination reagent.NBS or NCS (2.2 equiv) was used as halogenation
reagent.The isolated yield
was given when xanthotoxin was applied in gram scale for bromination.In summary, we streamlined the synthesis of hinckdentine
A (12
steps) from simple starting materials, featuring the first asymmetric
azo-ene cyclization to furnish the N-containing quaternary carbon
center and highly regioselective Schmidt rearrangement and Buchwald–Hartwig
amination to construct the full carbon framework of indolo[1,2-c]quinazoline. DFT calculations scrutinized the feasibility
of tribromination in previous syntheses and defined viable substrates
for successful C8-bromination. The novel bifunctional phosphine sulfide
catalyst bearing a thiourea moiety as a hydrogen bonding donor effectively
realized the requisite bromination. Moreover, halogenation of various
substrates reinforced this superior method to provide intriguing derivatives
for future modification and biological evaluation. Further exploration
to design a new catalyst system for bromination of the proposed biosynthetic
intermediate (i.e., 2) as well as harnessing synthetic
capabilities on site-selective functionalization[61−63] via noncovalent
interactions in the context of natural product synthesis is currently
underway in our laboratory.
Authors: Jonathan Latham; Eileen Brandenburger; Sarah A Shepherd; Binuraj R K Menon; Jason Micklefield Journal: Chem Rev Date: 2017-05-03 Impact factor: 60.622
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