Literature DB >> 35524411

Effects of cholesterol and PIP2 on interactions between glycophorin A and Band 3 in lipid bilayers.

Xiaoxue Qin1, D Peter Tieleman2, Qing Liang3.   

Abstract

In the erythrocyte membrane, the interactions between glycophorin A (GPA) and Band 3 are associated strongly with the biological function of the membrane and several blood disorders. In this work, using coarse-grained molecular-dynamics simulations, we systematically investigate the effects of cholesterol and phosphatidylinositol-4,5-bisphosphate (PIP2) on the interactions of GPA with Band 3 in the model erythrocyte membranes. We examine the dynamics of the interactions of GPA with Band 3 in different lipid bilayers on the microsecond time scale and calculate the binding free energy between GPA and Band 3. The results indicate that cholesterols thermodynamically favor the binding of GPA to Band 3 by increasing the thickness of the lipid bilayer and by producing an effective attraction between the proteins due to the depletion effect. Cholesterols also slow the kinetics of the binding of GPA to Band 3 by reducing the lateral mobility of the lipids and proteins and may influence the binding sites between the proteins. The anionic PIP2 lipids prefer binding to the surface of the proteins through electrostatic attraction between the PIP2 headgroup and the positively charged residues on the protein surface. Ions in the solvent facilitate PIP2 aggregation, which promotes the binding of GPA to Band 3.
Copyright © 2022 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2022        PMID: 35524411      PMCID: PMC9247472          DOI: 10.1016/j.bpj.2022.05.001

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   3.699


  45 in total

1.  Organization and Dynamics of Receptor Proteins in a Plasma Membrane.

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2.  Parameters for Martini sterols and hopanoids based on a virtual-site description.

Authors:  M N Melo; H I Ingólfsson; S J Marrink
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

3.  Characterization of Specific Ion Effects on PI(4,5)P2 Clustering: Molecular Dynamics Simulations and Graph-Theoretic Analysis.

Authors:  Kyungreem Han; Arne Gericke; Richard W Pastor
Journal:  J Phys Chem B       Date:  2020-02-11       Impact factor: 2.991

4.  A transmembrane helix dimer: structure and implications.

Authors:  K R MacKenzie; J H Prestegard; D M Engelman
Journal:  Science       Date:  1997-04-04       Impact factor: 47.728

5.  Crystal structure of the anion exchanger domain of human erythrocyte band 3.

Authors:  Takatoshi Arakawa; Takami Kobayashi-Yurugi; Yilmaz Alguel; Hiroko Iwanari; Hinako Hatae; Momi Iwata; Yoshito Abe; Tomoya Hino; Chiyo Ikeda-Suno; Hiroyuki Kuma; Dongchon Kang; Takeshi Murata; Takao Hamakubo; Alexander D Cameron; Takuya Kobayashi; Naotaka Hamasaki; So Iwata
Journal:  Science       Date:  2015-11-06       Impact factor: 47.728

6.  The N-terminal 11 amino acids of human erythrocyte band 3 are critical for aldolase binding and protein phosphorylation: implications for band 3 function.

Authors:  Silverio Perrotta; Adriana Borriello; Andrea Scaloni; Lucia De Franceschi; Anna Maria Brunati; Francesco Turrini; Vincenzo Nigro; Emanuele Miraglia del Giudice; Bruno Nobili; Maria Luisa Conte; Francesca Rossi; Achille Iolascon; Arianna Donella-Deana; Vincenzo Zappia; Vincenzo Poggi; William Anong; Philip Low; Narla Mohandas; Fulvio Della Ragione
Journal:  Blood       Date:  2005-08-23       Impact factor: 22.113

Review 7.  Computational Modeling of Realistic Cell Membranes.

Authors:  Siewert J Marrink; Valentina Corradi; Paulo C T Souza; Helgi I Ingólfsson; D Peter Tieleman; Mark S P Sansom
Journal:  Chem Rev       Date:  2019-01-09       Impact factor: 72.087

8.  Molecular mechanism for bidirectional regulation of CD44 for lipid raft affiliation by palmitoylations and PIP2.

Authors:  Fude Sun; Carsten F E Schroer; Carlos R Palacios; Lida Xu; Shi-Zhong Luo; Siewert J Marrink
Journal:  PLoS Comput Biol       Date:  2020-04-09       Impact factor: 4.475

9.  Interaction of the human erythrocyte Band 3 anion exchanger 1 (AE1, SLC4A1) with lipids and glycophorin A: Molecular organization of the Wright (Wr) blood group antigen.

Authors:  Antreas C Kalli; Reinhart A F Reithmeier
Journal:  PLoS Comput Biol       Date:  2018-07-16       Impact factor: 4.475

10.  Hydrophobic Mismatch Modulates Stability and Plasticity of Human Mitochondrial VDAC2.

Authors:  Shashank Ranjan Srivastava; Punit Zadafiya; Radhakrishnan Mahalakshmi
Journal:  Biophys J       Date:  2018-11-07       Impact factor: 4.033

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