| Literature DB >> 35520435 |
Hung Tan Pham1, Cam-Tu Dang Phan2, Minh Tho Nguyen3, Nguyen Minh Tam4,5.
Abstract
A pentagonal hetero-prismatic structural motif was found for singly transition metal doped M@Ge5E5 + clusters, where the transition metal atom is located at the centre of a (5/5) Ge5E5 prism in which Ge is mixed with either P or As atoms. Structural characterization indicates that each (5/5) Ge5E5 prism is established by joining of two Ge3E2 and Ge2E3 strings in a prismatic fashion rather than two Ge5 and E5 strings. Each string results from a remarkable mixture of Ge and E atoms and contains only one E-E connection due to the fact that Ge-E bonds are much stronger than E-E connections. From the donor-acceptor perspective, the Ge5E5 tube donates electrons to the M center, which behaves as an acceptor. NBO atomic charge and ELI_D analyses demonstrate such electrostatic interactions of the M dopant with a Ge5E5 + tube which likely induce thermodynamic stability for the resulting M@Ge5E5 + cluster. CMO analysis illustrates that the conventional 18 electron count is recovered in the M@Ge5E5 + cations. This journal is © The Royal Society of Chemistry.Entities:
Year: 2020 PMID: 35520435 PMCID: PMC9054236 DOI: 10.1039/d0ra01316a
Source DB: PubMed Journal: RSC Adv ISSN: 2046-2069 Impact factor: 4.036
Fig. 1Shapes and relative energies (in kcal mol−1) of lower-lying isomers of Ge5P5+ and Ge5As5+ clusters. Geometry optimizations and energy calculations were performed at the B3P86/6-311+G(d) level.
Fig. 2Shapes of the global energy minimum structures of M@Ge5E5+ with M = Fe, Ru and Os and E = P and As. Geometry optimizations were performed using the B3P86 functional with the 6-311+G(d) basis set for Ge and E and aug-cc-pVTZ basis set for Fe and aug-cc-pVTZ-PP basis set for Ru and Os metals.
Fig. 3Geometric shapes of the lowest-energy structure of M@Ge5E5+.
Bond length (d, angstrom) and WBI (a.u.) of MGe, ME, E2 and GeE diatomic molecules
| Molecule |
| WBI | Molecule |
| WBI | Molecule |
| WBI |
|---|---|---|---|---|---|---|---|---|
| Fe–P | 2.1 | 2.6 | Ru–P | 2.1 | 3.2 | Os–P | 2.1 | 3.5 |
| Fe–As | 2.2 | 2.4 | Ru–As | 2.2 | 3.3 | Os–As | 2.1 | 4.1 |
| Fe–Ge | 2.3 | 2.3 | Ru–Ge | 2.2 | 3.3 | Os–Ge | 2.1 | 3.5 |
| Ge–Ge | 2.4 | 2.5 | Ge–P | 2.2 | 2.7 | Ge–As | 2.4 | 3.1 |
| P–P | 1.9 | 3.6 | As–As | 2.1 | 3.5 |
Geometrical parameters (distance in angstrom) and WBI (a. u.) of M@Ge5E5+ prisms
| Fe@Ge5P5+ | Ru@Ge5P5+ | Os@Ge5P5+ | Fe@Ge5As5+ | Ru@Ge5As5+ | Fe@Ge5As5+ | ||
|---|---|---|---|---|---|---|---|
| M–P1 | 2.3/1.2 | 2.4/1.6 | 2.5/1.5 | M–As1 | 2.4/1.1 | 2.5/1.4 | 2.6/1.5 |
| M–P2 | 2.3/1.2 | 2.4/1.4 | 2.4/1.6 | M–As2 | 2.4/1.1 | 2.5/1.4 | 2.6/1.6 |
| M–P4 | 2.3/1.3 | 2.3/1.2 | 2.3/1.9 | M–As4 | 2.4/1.1 | 2.4/1.6 | 2.4/1.9 |
| M–Ge4 | 2.6/1.0 | 2.7/1.2 | 2.7/1.4 | M–Ge4 | 2.6/0.9 | 2.7/1.2 | 2.7/1.3 |
| M–Ge1 | 2.5/1.1 | 2.6/1.3 | 2.6/1.5 | M–Ge1 | 2.6/1.0 | 2.6/1.3 | 2.6/1.5 |
| M–Ge2 | 2.5/1.1 | 2.6/1.4 | 2.5/1.6 | M–Ge2 | 2.6/0.9 | 2.6/1.4 | 2.6/1.6 |
| P2–P3 | 2.2/1.0 | 2.2/1.0 | 2.2/0.1 | As2–As3 | 2.5/0.9 | 2.4/1.0 | 2.4/1.0 |
| P1–Ge4 | 2.5/0.7 | 2.4/0.9 | 2.4/0.8 | As1–Ge4 | 2.5/0.9 | 2.5/0.9 | 2.5/0.8 |
| P2–Ge4 | 2.5/0.8 | 2.5/0.7 | 2.5/0.7 | As2–Ge4 | 2.5/0.7 | 2.6/0.8 | 2.9/0.5 |
| P1–Ge1 | 2.5/0.7 | 2.6/0.6 | 2.6/0.6 | As1–Ge1 | 2.6/0.7 | 2.7/0.6 | 2.7/0.6 |
| P2–Ge2 | 2.5/0.7 | 2.6/0.5 | 2.7/0.4 | As2–Ge2 | 2.6/0.8 | 2.7/0.6 | 2.7/0.5 |
| P4–Ge4 | 2.5/0.7 | 2.6/0.6 | 2.6/0.5 | As4–Ge4 | 2.6/0.7 | 2.7/0.6 | 2.6/0.7 |
| P4–Ge1 | 2.4/0.9 | 2.6/0.6 | 2.6/0.6 | As4–Ge1 | 2.5/0.9 | 2.6/0.7 | 2.6/0.6 |
| Ge3–Ge2 | 2.6/0.7 | 2.8/0.5 | 2.9/0.5 | Ge3–Ge2 | 2.7/0.7 | 2.7/0.8 | 2.7/0.5 |
Dissociation energy (DE, kcal mol−1) and bond length (r, Å) of H2E–XH3 molecules (TPSSh/6-311++G(d,p))
| DE (E–X) |
| |
|---|---|---|
| H2P–PH2 | 50.3 | 2.26 |
| H2As–AsH2 | 47.0 | 2.47 |
| H3Ge–GeH3 | 66.2 | 2.43 |
| H3Ge–PH2 | 60.7 | 2.34 |
| H3Ge–AsH2 | 57.9 | 2.44 |
Fig. 4ELI_D maps plotted at the bifurcation value of 1.3 for M@Ge5E5+.
Fig. 5A representative orbital interaction diagram of Fe with Ge5P5+ prism producing MOs containing 18 electrons.