Literature DB >> 35503780

A neutralizing antibody target in early HIV-1 infection was recapitulated in rhesus macaques immunized with the transmitted/founder envelope sequence.

Sarah Welbourn1, Srirupa Chakraborty2, Jie E Yang3, Anne S Gleinich4, Sailaja Gangadhara1, Salar Khan1, Courtney Ferrebee1, Bhrugu Yagnik1, Samantha Burton1, Tysheena Charles1, S Abigail Smith1, Danielle Williams1, Rohini Mopuri1, Amit A Upadhyay1, Justin Thompson1, Matt A Price5,6, Shiyu Wang7, Zhaohui Qin7, Xiaoying Shen8, LaTonya D Williams8, Nathan Eisel8, Tiffany Peters8, Lu Zhang8, William Kilembe9, Etienne Karita10, Georgia D Tomaras8, Steven E Bosinger1,11, Rama R Amara1,12, Parastoo Azadi4, Elizabeth R Wright3, Sandrasegaram Gnanakaran2, Cynthia A Derdeyn1,11.   

Abstract

Transmitted/founder (T/F) HIV-1 envelope proteins (Envs) from infected individuals that developed neutralization breadth are likely to possess inherent features desirable for vaccine immunogen design. To explore this premise, we conducted an immunization study in rhesus macaques (RM) using T/F Env sequences from two human subjects, one of whom developed potent and broad neutralizing antibodies (Z1800M) while the other developed little to no neutralizing antibody responses (R66M) during HIV-1 infection. Using a DNA/MVA/protein immunization protocol, 10 RM were immunized with each T/F Env. Within each T/F Env group, the protein boosts were administered as either monomeric gp120 or stabilized trimeric gp140 protein. All vaccination regimens elicited high titers of antigen-specific IgG, and two animals that received monomeric Z1800M Env gp120 developed autologous neutralizing activity. Using early Env escape variants isolated from subject Z1800M as guides, the serum neutralizing activity of the two immunized RM was found to be dependent on the gp120 V5 region. Interestingly, the exact same residues of V5 were also targeted by a neutralizing monoclonal antibody (nmAb) isolated from the subject Z1800M early in infection. Glycan profiling and computational modeling of the Z1800M Env gp120 immunogen provided further evidence that the V5 loop is exposed in this T/F Env and was a dominant feature that drove neutralizing antibody targeting during infection and immunization. An expanded B cell clonotype was isolated from one of the neutralization-positive RM and nmAbs corresponding to this group demonstrated V5-dependent neutralization similar to both the RM serum and the human Z1800M nmAb. The results demonstrate that neutralizing antibody responses elicited by the Z1800M T/F Env in RM converged with those in the HIV-1 infected human subject, illustrating the potential of using immunogens based on this or other T/F Envs with well-defined immunogenicity as a starting point to drive breadth.

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Year:  2022        PMID: 35503780      PMCID: PMC9106183          DOI: 10.1371/journal.ppat.1010488

Source DB:  PubMed          Journal:  PLoS Pathog        ISSN: 1553-7366            Impact factor:   6.823


  102 in total

1.  Evidence for potent autologous neutralizing antibody titers and compact envelopes in early infection with subtype C human immunodeficiency virus type 1.

Authors:  Bing Li; Julie M Decker; Roy W Johnson; Frederic Bibollet-Ruche; Xiping Wei; Joseph Mulenga; Susan Allen; Eric Hunter; Beatrice H Hahn; George M Shaw; Jerry L Blackwell; Cynthia A Derdeyn
Journal:  J Virol       Date:  2006-06       Impact factor: 5.103

2.  Full-length RNA-seq from single cells using Smart-seq2.

Authors:  Simone Picelli; Omid R Faridani; Asa K Björklund; Gösta Winberg; Sven Sagasser; Rickard Sandberg
Journal:  Nat Protoc       Date:  2014-01-02       Impact factor: 13.491

3.  Comparative Protein Structure Modeling Using MODELLER.

Authors:  Benjamin Webb; Andrej Sali
Journal:  Curr Protoc Bioinformatics       Date:  2016-06-20

4.  Stabilization of the soluble, cleaved, trimeric form of the envelope glycoprotein complex of human immunodeficiency virus type 1.

Authors:  Rogier W Sanders; Mika Vesanen; Norbert Schuelke; Aditi Master; Linnea Schiffner; Roopa Kalyanaraman; Maciej Paluch; Ben Berkhout; Paul J Maddon; William C Olson; Min Lu; John P Moore
Journal:  J Virol       Date:  2002-09       Impact factor: 5.103

5.  The C3/465 glycan hole cluster in BG505 HIV-1 envelope is the major neutralizing target involved in preventing mucosal SHIV infection.

Authors:  Tysheena P Charles; Samantha L Burton; Prabhu S Arunachalam; Christopher A Cottrell; Leigh M Sewall; Venkata S Bollimpelli; Sailaja Gangadhara; Antu K Dey; Andrew B Ward; George M Shaw; Eric Hunter; Rama R Amara; Bali Pulendran; Marit J van Gils; Cynthia A Derdeyn
Journal:  PLoS Pathog       Date:  2021-02-08       Impact factor: 7.464

6.  Holes in the Glycan Shield of the Native HIV Envelope Are a Target of Trimer-Elicited Neutralizing Antibodies.

Authors:  Laura E McCoy; Marit J van Gils; Gabriel Ozorowski; Terrence Messmer; Bryan Briney; James E Voss; Daniel W Kulp; Matthew S Macauley; Devin Sok; Matthias Pauthner; Sergey Menis; Christopher A Cottrell; Jonathan L Torres; Jessica Hsueh; William R Schief; Ian A Wilson; Andrew B Ward; Rogier W Sanders; Dennis R Burton
Journal:  Cell Rep       Date:  2016-08-18       Impact factor: 9.423

7.  BALDR: a computational pipeline for paired heavy and light chain immunoglobulin reconstruction in single-cell RNA-seq data.

Authors:  Amit A Upadhyay; Robert C Kauffman; Amber N Wolabaugh; Alice Cho; Nirav B Patel; Samantha M Reiss; Colin Havenar-Daughton; Reem A Dawoud; Gregory K Tharp; Iñaki Sanz; Bali Pulendran; Shane Crotty; F Eun-Hyung Lee; Jens Wrammert; Steven E Bosinger
Journal:  Genome Med       Date:  2018-03-20       Impact factor: 15.266

8.  Gp120 V5 Is Targeted by the First Wave of Sequential Neutralizing Antibodies in SHIVSF162P3N-Infected Rhesus Macaques.

Authors:  Manxue Jia; Hong Lu; Xiang-Peng Kong; Cecilia Cheng-Mayer; Xueling Wu
Journal:  Viruses       Date:  2018-05-16       Impact factor: 5.048

9.  HIV-1 Envelope Glycoproteins from Diverse Clades Differentiate Antibody Responses and Durability among Vaccinees.

Authors:  Nicole L Yates; Allan C deCamp; Bette T Korber; Hua-Xin Liao; Carmela Irene; Abraham Pinter; James Peacock; Linda J Harris; Sheetal Sawant; Peter Hraber; Xiaoying Shen; Supachai Rerks-Ngarm; Punnee Pitisuttithum; Sorachai Nitayapan; Phillip W Berman; Merlin L Robb; Giuseppe Pantaleo; Susan Zolla-Pazner; Barton F Haynes; S Munir Alam; David C Montefiori; Georgia D Tomaras
Journal:  J Virol       Date:  2018-03-28       Impact factor: 5.103

10.  Quantification of the Resilience and Vulnerability of HIV-1 Native Glycan Shield at Atomistic Detail.

Authors:  Srirupa Chakraborty; Zachary T Berndsen; Nicolas W Hengartner; Bette T Korber; Andrew B Ward; S Gnanakaran
Journal:  iScience       Date:  2020-11-20
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