Literature DB >> 33556148

The C3/465 glycan hole cluster in BG505 HIV-1 envelope is the major neutralizing target involved in preventing mucosal SHIV infection.

Tysheena P Charles1,2, Samantha L Burton1,2, Prabhu S Arunachalam3, Christopher A Cottrell4, Leigh M Sewall4, Venkata S Bollimpelli1,2, Sailaja Gangadhara1,2, Antu K Dey5, Andrew B Ward4, George M Shaw6, Eric Hunter1,2,7, Rama R Amara1,2,8, Bali Pulendran3, Marit J van Gils9, Cynthia A Derdeyn1,2,7.   

Abstract

Stabilized HIV-1 envelope (Env) trimers elicit tier 2 autologous neutralizing antibody (nAb) responses in immunized animals. We previously demonstrated that BG505 SOSIP.664.T332N gp140 (BG505 SOSIP) immunization of rhesus macaques (RM) provided robust protection against autologous intra-vaginal simian-human immunodeficiency virus (SHIV) challenge that was predicted by high serum nAb titers. Here, we show that nAb in these protected RM targeted a glycan hole proximal to residue 465 in gp120 in all cases. nAb also targeted another glycan hole at residues 241/289 and an epitope in V1 at varying frequencies. Non-neutralizing antibodies directed at N611-shielded epitopes in gp41 were also present but were more prevalent in RM with low nAb titers. Longitudinal analysis demonstrated that nAb broadened in some RM during sequential immunization but remained focused in others, the latter being associated with increases in nAb titer. Thirty-eight monoclonal antibodies (mAbs) isolated from a protected RM with an exceptionally high serum neutralization titer bound to the trimer in ELISA, and four of the mAbs potently neutralized the BG505 Env pseudovirus (PV) and SHIV. The four neutralizing mAbs were clonally related and targeted the 465 glycan hole to varying degrees, mimicking the serum. The data demonstrate that the C3/465 glycan hole cluster was the dominant neutralization target in high titer protected RM, despite other co-circulating neutralizing and non-neutralizing specificities. The isolation of a neutralizing mAb family argues that clonotype expansion occurred during BG505 SOSIP immunization, leading to high titer, protective nAb and setting a desirable benchmark for HIV vaccines.

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Year:  2021        PMID: 33556148      PMCID: PMC7895394          DOI: 10.1371/journal.ppat.1009257

Source DB:  PubMed          Journal:  PLoS Pathog        ISSN: 1553-7366            Impact factor:   7.464


  54 in total

1.  Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission.

Authors:  Cynthia A Derdeyn; Julie M Decker; Frederic Bibollet-Ruche; John L Mokili; Mark Muldoon; Scott A Denham; Marintha L Heil; Francis Kasolo; Rosemary Musonda; Beatrice H Hahn; George M Shaw; Bette T Korber; Susan Allen; Eric Hunter
Journal:  Science       Date:  2004-03-26       Impact factor: 47.728

Review 2.  Correlates of protection induced by vaccination.

Authors:  Stanley A Plotkin
Journal:  Clin Vaccine Immunol       Date:  2010-05-12

3.  Full-length RNA-seq from single cells using Smart-seq2.

Authors:  Simone Picelli; Omid R Faridani; Asa K Björklund; Gösta Winberg; Sven Sagasser; Rickard Sandberg
Journal:  Nat Protoc       Date:  2014-01-02       Impact factor: 13.491

4.  B-lymphocyte dysfunction in chronic HIV-1 infection does not prevent cross-clade neutralization breadth.

Authors:  Saikat Boliar; Megan K Murphy; T Cameron Tran; Diane G Carnathan; Wendy S Armstrong; Guido Silvestri; Cynthia A Derdeyn
Journal:  J Virol       Date:  2012-05-23       Impact factor: 5.103

5.  Fusion peptide of HIV-1 as a site of vulnerability to neutralizing antibody.

Authors:  Rui Kong; Kai Xu; Tongqing Zhou; Priyamvada Acharya; Thomas Lemmin; Kevin Liu; Gabriel Ozorowski; Cinque Soto; Justin D Taft; Robert T Bailer; Evan M Cale; Lei Chen; Chang W Choi; Gwo-Yu Chuang; Nicole A Doria-Rose; Aliaksandr Druz; Ivelin S Georgiev; Jason Gorman; Jinghe Huang; M Gordon Joyce; Mark K Louder; Xiaochu Ma; Krisha McKee; Sijy O'Dell; Marie Pancera; Yongping Yang; Scott C Blanchard; Walther Mothes; Dennis R Burton; Wayne C Koff; Mark Connors; Andrew B Ward; Peter D Kwong; John R Mascola
Journal:  Science       Date:  2016-05-13       Impact factor: 47.728

6.  Subtype-specific conservation of isoleucine 309 in the envelope V3 domain is linked to immune evasion in subtype C HIV-1 infection.

Authors:  Rebecca M Lynch; Rong Rong; Bing Li; Tongye Shen; William Honnen; Joseph Mulenga; Susan Allen; Abraham Pinter; S Gnanakaran; Cynthia A Derdeyn
Journal:  Virology       Date:  2010-05-21       Impact factor: 3.616

7.  Structure-based design of native-like HIV-1 envelope trimers to silence non-neutralizing epitopes and eliminate CD4 binding.

Authors:  Daniel W Kulp; Jon M Steichen; Matthias Pauthner; Xiaozhen Hu; Torben Schiffner; Alessia Liguori; Christopher A Cottrell; Colin Havenar-Daughton; Gabriel Ozorowski; Erik Georgeson; Oleksandr Kalyuzhniy; Jordan R Willis; Michael Kubitz; Yumiko Adachi; Samantha M Reiss; Mia Shin; Natalia de Val; Andrew B Ward; Shane Crotty; Dennis R Burton; William R Schief
Journal:  Nat Commun       Date:  2017-11-21       Impact factor: 14.919

8.  BALDR: a computational pipeline for paired heavy and light chain immunoglobulin reconstruction in single-cell RNA-seq data.

Authors:  Amit A Upadhyay; Robert C Kauffman; Amber N Wolabaugh; Alice Cho; Nirav B Patel; Samantha M Reiss; Colin Havenar-Daughton; Reem A Dawoud; Gregory K Tharp; Iñaki Sanz; Bali Pulendran; Shane Crotty; F Eun-Hyung Lee; Jens Wrammert; Steven E Bosinger
Journal:  Genome Med       Date:  2018-03-20       Impact factor: 15.266

9.  Epitopes for neutralizing antibodies induced by HIV-1 envelope glycoprotein BG505 SOSIP trimers in rabbits and macaques.

Authors:  P J Klasse; Thomas J Ketas; Christopher A Cottrell; Gabriel Ozorowski; Gargi Debnath; Diawoye Camara; Erik Francomano; Pavel Pugach; Rajesh P Ringe; Celia C LaBranche; Marit J van Gils; Christine A Bricault; Dan H Barouch; Shane Crotty; Guido Silvestri; Sudhir Kasturi; Bali Pulendran; Ian A Wilson; David C Montefiori; Rogier W Sanders; Andrew B Ward; John P Moore
Journal:  PLoS Pathog       Date:  2018-02-23       Impact factor: 6.823

10.  Completeness of HIV-1 Envelope Glycan Shield at Transmission Determines Neutralization Breadth.

Authors:  Kshitij Wagh; Edward F Kreider; Yingying Li; Hannah J Barbian; Gerald H Learn; Elena Giorgi; Peter T Hraber; Timothy G Decker; Andrew G Smith; Marcos V Gondim; Lindsey Gillis; Jamie Wandzilak; Gwo-Yu Chuang; Reda Rawi; Fangping Cai; Pierre Pellegrino; Ian Williams; Julie Overbaugh; Feng Gao; Peter D Kwong; Barton F Haynes; George M Shaw; Persephone Borrow; Michael S Seaman; Beatrice H Hahn; Bette Korber
Journal:  Cell Rep       Date:  2018-10-23       Impact factor: 9.423

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  10 in total

1.  A neutralizing antibody target in early HIV-1 infection was recapitulated in rhesus macaques immunized with the transmitted/founder envelope sequence.

Authors:  Sarah Welbourn; Srirupa Chakraborty; Jie E Yang; Anne S Gleinich; Sailaja Gangadhara; Salar Khan; Courtney Ferrebee; Bhrugu Yagnik; Samantha Burton; Tysheena Charles; S Abigail Smith; Danielle Williams; Rohini Mopuri; Amit A Upadhyay; Justin Thompson; Matt A Price; Shiyu Wang; Zhaohui Qin; Xiaoying Shen; LaTonya D Williams; Nathan Eisel; Tiffany Peters; Lu Zhang; William Kilembe; Etienne Karita; Georgia D Tomaras; Steven E Bosinger; Rama R Amara; Parastoo Azadi; Elizabeth R Wright; Sandrasegaram Gnanakaran; Cynthia A Derdeyn
Journal:  PLoS Pathog       Date:  2022-05-03       Impact factor: 6.823

2.  A clade C HIV-1 vaccine protects against heterologous SHIV infection by modulating IgG glycosylation and T helper response in macaques.

Authors:  Anusmita Sahoo; Andrew T Jones; Narayanaiah Cheedarla; Sailaja Gangadhara; Vicky Roy; Tiffany M Styles; Ayalnesh Shiferaw; Korey L Walter; LaTonya D Williams; Xiaoying Shen; Gabriel Ozorowski; Wen-Hsin Lee; Samantha Burton; Lasanajak Yi; Xuezheng Song; Zhaohui S Qin; Cynthia A Derdeyn; Andrew B Ward; John D Clements; Raghavan Varadarajan; Georgia D Tomaras; Pamela A Kozlowski; Galit Alter; Rama Rao Amara
Journal:  Sci Immunol       Date:  2022-07-22

3.  Structural and genetic convergence of HIV-1 neutralizing antibodies in vaccinated non-human primates.

Authors:  Fangping Cai; Wei-Hung Chen; Weimin Wu; Julia A Jones; Misook Choe; Neelakshi Gohain; Xiaoying Shen; Celia LaBranche; Amanda Eaton; Laura Sutherland; Esther M Lee; Giovanna E Hernandez; Nelson R Wu; Richard Scearce; Michael S Seaman; M Anthony Moody; Sampa Santra; Kevin Wiehe; Georgia D Tomaras; Kshitij Wagh; Bette Korber; Mattia Bonsignori; David C Montefiori; Barton F Haynes; Natalia de Val; M Gordon Joyce; Kevin O Saunders
Journal:  PLoS Pathog       Date:  2021-06-04       Impact factor: 7.464

4.  Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM.

Authors:  Aleksandar Antanasijevic; Leigh M Sewall; Christopher A Cottrell; Diane G Carnathan; Luis E Jimenez; Julia T Ngo; Jennifer B Silverman; Bettina Groschel; Erik Georgeson; Jinal Bhiman; Raiza Bastidas; Celia LaBranche; Joel D Allen; Jeffrey Copps; Hailee R Perrett; Kimmo Rantalainen; Fabien Cannac; Yuhe R Yang; Alba Torrents de la Peña; Rebeca Froes Rocha; Zachary T Berndsen; David Baker; Neil P King; Rogier W Sanders; John P Moore; Shane Crotty; Max Crispin; David C Montefiori; Dennis R Burton; William R Schief; Guido Silvestri; Andrew B Ward
Journal:  Nat Commun       Date:  2021-08-10       Impact factor: 14.919

5.  Antibody responses induced by SHIV infection are more focused than those induced by soluble native HIV-1 envelope trimers in non-human primates.

Authors:  Jelle van Schooten; Marlies M van Haaren; Hui Li; Laura E McCoy; Colin Havenar-Daughton; Christopher A Cottrell; Judith A Burger; Patricia van der Woude; Leanne C Helgers; Ilhan Tomris; Celia C Labranche; David C Montefiori; Andrew B Ward; Dennis R Burton; John P Moore; Rogier W Sanders; Shane Crotty; George M Shaw; Marit J van Gils
Journal:  PLoS Pathog       Date:  2021-08-25       Impact factor: 6.823

6.  Engineering well-expressed, V2-immunofocusing HIV-1 envelope glycoprotein membrane trimers for use in heterologous prime-boost vaccine regimens.

Authors:  Emma T Crooks; Francisco Almanza; Alessio D'Addabbo; Erika Duggan; Jinsong Zhang; Kshitij Wagh; Huihui Mou; Joel D Allen; Alyssa Thomas; Keiko Osawa; Bette T Korber; Yaroslav Tsybovsky; Evan Cale; John Nolan; Max Crispin; Laurent K Verkoczy; James M Binley
Journal:  PLoS Pathog       Date:  2021-10-22       Impact factor: 7.464

Review 7.  Structure-guided envelope trimer design in HIV-1 vaccine development: a narrative review.

Authors:  Ronald Derking; Rogier W Sanders
Journal:  J Int AIDS Soc       Date:  2021-11       Impact factor: 5.396

8.  Induction of tier-2 neutralizing antibodies in mice with a DNA-encoded HIV envelope native like trimer.

Authors:  Ziyang Xu; Susanne Walker; Megan C Wise; Neethu Chokkalingam; Mansi Purwar; Alan Moore; Edgar Tello-Ruiz; Yuanhan Wu; Sonali Majumdar; Kylie M Konrath; Abhijeet Kulkarni; Nicholas J Tursi; Faraz I Zaidi; Emma L Reuschel; Ishaan Patel; April Obeirne; Jianqiu Du; Katherine Schultheis; Lauren Gites; Trevor Smith; Janess Mendoza; Kate E Broderick; Laurent Humeau; Jesper Pallesen; David B Weiner; Daniel W Kulp
Journal:  Nat Commun       Date:  2022-02-04       Impact factor: 17.694

9.  V2 hotspot optimized MVA vaccine expressing stabilized HIV-1 Clade C envelope Gp140 delays acquisition of heterologous Clade C Tier 2 challenges in Mamu-A*01 negative Rhesus Macaques.

Authors:  Tiffany M Styles; Sailaja Gangadhara; Pradeep B J Reddy; Anusmita Sahoo; Ayalensh Shiferaw; Sarah Welbourn; Pamela A Kozlowski; Cynthia A Derdeyn; Vijayakumar Velu; Rama Rao Amara
Journal:  Front Immunol       Date:  2022-07-22       Impact factor: 8.786

10.  Augmenting glycosylation-directed folding pathways enhances the fidelity of HIV Env immunogen production in plants.

Authors:  Emmanuel Margolin; Joel D Allen; Matthew Verbeek; Ros Chapman; Ann Meyers; Michiel van Diepen; Phindile Ximba; Thopisang Motlou; Penny L Moore; Jeremy Woodward; Richard Strasser; Max Crispin; Anna-Lise Williamson; Edward P Rybicki
Journal:  Biotechnol Bioeng       Date:  2022-07-19       Impact factor: 4.395

  10 in total

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