Literature DB >> 35495546

Recommender-as-a-Service with Chatbot Guided Domain-science Knowledge Discovery in a Science Gateway.

Komal Vekaria1, Prasad Calyam1, Sai Swathi Sivarathri1, Songjie Wang1, Yuanxun Zhang1, Ashish Pandey1, Cong Chen1, Dong Xu1, Trupti Joshi2, Satish Nair1.   

Abstract

Scientists in disciplines such as neuroscience and bioinformatics are increasingly relying on science gateways for experimentation on voluminous data, as well as analysis and visualization in multiple perspectives. Though current science gateways provide easy access to computing resources, datasets and tools specific to the disciplines, scientists often use slow and tedious manual efforts to perform knowledge discovery to accomplish their research/education tasks. Recommender systems can provide expert guidance and can help them to navigate and discover relevant publications, tools, data sets, or even automate cloud resource configurations suitable for a given scientific task. To realize the potential of integration of recommenders in science gateways in order to spur research productivity, we present a novel "OnTimeRecommend" recommender system. The OnTimeRecommend comprises of several integrated recommender modules implemented as microservices that can be augmented to a science gateway in the form of a recommender-as-a-service. The guidance for use of the recommender modules in a science gateway is aided by a chatbot plug-in viz., Vidura Advisor. To validate our OnTimeRecommend, we integrate and show benefits for both novice and expert users in domain-specific knowledge discovery within two exemplar science gateways, one in neuroscience (CyNeuro) and the other in bioinformatics (KBCommons).

Entities:  

Keywords:  chatbot guided user interface; knowledge discovery; microservices; recommender system; science gateway

Year:  2020        PMID: 35495546      PMCID: PMC9040042          DOI: 10.1002/cpe.6080

Source DB:  PubMed          Journal:  Concurr Comput        ISSN: 1532-0626            Impact factor:   1.831


  8 in total

Review 1.  Open source tools for large-scale neuroscience.

Authors:  Jeremy Freeman
Journal:  Curr Opin Neurobiol       Date:  2015-05-16       Impact factor: 6.627

2.  Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing.

Authors:  Dmitry Usoskin; Alessandro Furlan; Saiful Islam; Hind Abdo; Peter Lönnerberg; Daohua Lou; Jens Hjerling-Leffler; Jesper Haeggström; Olga Kharchenko; Peter V Kharchenko; Sten Linnarsson; Patrik Ernfors
Journal:  Nat Neurosci       Date:  2014-11-24       Impact factor: 24.884

Review 3.  Disentangling neural cell diversity using single-cell transcriptomics.

Authors:  Jean-Francois Poulin; Bosiljka Tasic; Jens Hjerling-Leffler; Jeffrey M Trimarchi; Rajeshwar Awatramani
Journal:  Nat Neurosci       Date:  2016-08-26       Impact factor: 24.884

4.  Recommender-as-a-Service with Chatbot Guided Domain-science Knowledge Discovery in a Science Gateway.

Authors:  Komal Vekaria; Prasad Calyam; Sai Swathi Sivarathri; Songjie Wang; Yuanxun Zhang; Ashish Pandey; Cong Chen; Dong Xu; Trupti Joshi; Satish Nair
Journal:  Concurr Comput       Date:  2020-11-11       Impact factor: 1.831

5.  The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences.

Authors:  Nirav Merchant; Eric Lyons; Stephen Goff; Matthew Vaughn; Doreen Ware; David Micklos; Parker Antin
Journal:  PLoS Biol       Date:  2016-01-11       Impact factor: 8.029

6.  Cyberinfrastructure to Improve Forest Health and Productivity: The Role of Tree Databases in Connecting Genomes, Phenomes, and the Environment.

Authors:  Jill L Wegrzyn; Margaret A Staton; Nathaniel R Street; Dorrie Main; Emily Grau; Nic Herndon; Sean Buehler; Taylor Falk; Sumaira Zaman; Risharde Ramnath; Peter Richter; Lang Sun; Bradford Condon; Abdullah Almsaeed; Ming Chen; Chanaka Mannapperuma; Sook Jung; Stephen Ficklin
Journal:  Front Plant Sci       Date:  2019-06-25       Impact factor: 5.753

7.  The Deep Learning-Based Recommender System "Pubmender" for Choosing a Biomedical Publication Venue: Development and Validation Study.

Authors:  Renchu Guan; Dong Xu; Xiaoyue Feng; Hao Zhang; Yijie Ren; Penghui Shang; Yi Zhu; Yanchun Liang
Journal:  J Med Internet Res       Date:  2019-05-24       Impact factor: 5.428

Review 8.  A framework for streamlining research workflow in neuroscience and psychology.

Authors:  Jonas Kubilius
Journal:  Front Neuroinform       Date:  2014-01-17       Impact factor: 4.081

  8 in total
  1 in total

1.  Recommender-as-a-Service with Chatbot Guided Domain-science Knowledge Discovery in a Science Gateway.

Authors:  Komal Vekaria; Prasad Calyam; Sai Swathi Sivarathri; Songjie Wang; Yuanxun Zhang; Ashish Pandey; Cong Chen; Dong Xu; Trupti Joshi; Satish Nair
Journal:  Concurr Comput       Date:  2020-11-11       Impact factor: 1.831

  1 in total

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