| Literature DB >> 35494330 |
Xueping Yang1,2, Jing Zhou1, Zhen Yuan1, Ailu Lin1, Xin Li1, Zhengtu Cong1, Ru He2, Gang Zhu1.
Abstract
Introduction: Previous studies have analyzed the association between nitric oxide synthase 1 adaptor protein (NOS1AP) polymorphisms and schizophrenia; however, the results were inconsistent and there was a lack of evidence in a larger sample of Chinese Han population. Subjects andEntities:
Keywords: Chinese; nitric oxide synthase; nitric oxide synthase 1 adaptor protein; polymorphism; schizophrenia
Year: 2022 PMID: 35494330 PMCID: PMC9045341 DOI: 10.4103/psychiatry.IndianJPsychiatry_278_19
Source DB: PubMed Journal: Indian J Psychiatry ISSN: 0019-5545 Impact factor: 1.759
Figure 1Electrophoresis figure for rs1858232A/G
Figure 2Electrophoresis figure for rs4531275C/T
Figure 3Electrophoresis figure for rs4657178C/T
Figure 4Electrophoresis figure for rs6704393C/T
Genotype and allele distributions of the four analyzed SNPs in schizophrenic patients and healthy controls
| SNP | Whole patients, | Whole controls, |
|
| OR (95% CI) | Male patients, | Male controls, |
|
| OR (95% CI) | Female patients, | Female controls, |
|
| OR (95% CI) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs1858232 | |||||||||||||||
| Genetypes | |||||||||||||||
| AA | 67 (19.1) | 138 (26.4) | 45 (20.6) | 70 (28.1) | 22 (16.7) | 68 (24.9) | |||||||||
| GG | 79 (22.6) | 104 (19.9) | 48 (22.0) | 45 (18.1) | 31 (23.5) | 59 (21.6) | |||||||||
| AG | 204 (58.3) | 280 (53.6) | 6.256a | 0.044 | 125 (57.3) | 134 (53.8) | 3.803a | 0.151 | 79 (59.8) | 146 (53.5) | 3.510a | 0.180 | |||
| Alleles | |||||||||||||||
| A | 338 (48.3) | 556 (53.3) | 4.145a | 0.045 | 1.220(1.007-1.478) | 215 (49.3) | 274 (55.0) | 3.037a | 0.088 | 1.257(0.972-1.627) | 123 (46.6) | 282 (51.6) | 1.821a | 0.202 | 1.225(0.912-1.644) |
| G | 362 (51.7) | 488 (46.7) | 221 (50.7) | 224 (45.0) | 141 (53.4) | 264 (48.4) | |||||||||
| Dominant models | |||||||||||||||
| AG + GG | 283 (80.9) | 384 (73.6) | 6.199a | 0.014 | 1.518(1.092-2.111) | 173 (79.4) | 179 (71.9) | 3.495a | 0.068 | 1.503(0.979-2.308) | 110 (83.3) | 205 (75.1) | 3.497a | 0.074 | 1.659(0.973-2.828) |
| AA | 67 (19.1) | 138 (26.4) | 45 (20.6) | 70 (28.1) | 22 (16.7) | 68 (24.9) | |||||||||
| Recessive models | |||||||||||||||
| GG | 271 (77.4) | 418 (80.1) | 0.886a | 0.352 | 1.172(0.842-1.630) | 170 (78.0) | 204 (81.9) | 1.135a | 0.298 | 1.280(0.812-2.017) | 101 (76.5) | 216 (78.4) | 0.181a | 0.703 | 1.113(0.679-1.826) |
| AG+AA | 79 (22.6) | 104 (19.9) | 48 (22.0) | 45 (18.1) | 31 (23.5) | 59 (21.6) | |||||||||
| rs4531275 | |||||||||||||||
| Genetypes | |||||||||||||||
| TT | 80 (22.9) | 138 (26.4) | 46 (21.1) | 72 (28.9) | 34 (25.8) | 66 (24.2) | |||||||||
| CC | 83 (23.7) | 109 (20.9) | 51 (23.4) | 57 (22.9) | 32 (24.2) | 52 (19.0) | |||||||||
| TC | 187 (53.4) | 275 (52.7) | 1.860a | 0.390 | 121 (55.5) | 120 (48.2) | 4.026a | 0.130 | 66 (50.0) | 155 (56.8) | 1.997a | 0.371 | |||
| Alleles | |||||||||||||||
| C | 353 (50.4) | 493 (47.2) | 1.725a | 0.204 | 1.137(0.939-1.377) | 223 (51.1) | 234 (47.0) | 2.842a | 0.178 | 1.201(0.930-1.552) | 130 (49.2) | 259 (47.4) | 0.233a | 0.653 | 0.930(0.693-1.248) |
| T | 347 (49.6) | 551 (52.8) | 213 (48.9) | 264 (53.0) | 134 (50.8) | 287 (52.6) | |||||||||
| Dominant models | |||||||||||||||
| TC + CC | 270 (77.1) | 384 (73.6) | 1.432a | 0.264 | 1.213(0.884-1.664) | 172 (78.9) | 177 (71.1) | 3.759a | 0.055 | 1.521(0.994-2.327) | 98 (74.2) | 207 (75.8) | 0.120a | 0.806 | 1.088(0.674-1.756) |
| TT | 80 (22.9) | 138 (26.4) | 46 (21.1) | 72 (28.9) | 34 (25.8) | 66 (24.2) | |||||||||
| Recessive models | |||||||||||||||
| CC | 267 (76.3) | 413 (79.1) | 0.979a | 0.359 | 1.178(0.852-1.629) | 167 (76.6) | 192 (77.1) | 1.169a | 0.778 | 1.080(0.708-1.649) | 100 (75.8) | 221 (81.0) | 1.461a | 0.241 | 0.735(0.446-1.212) |
| TC + TT | 83 (23.7) | 109 (20.9 | 51 (23.4) | 57 (22.9) | 32 (24.2) | 52 (19.0) | |||||||||
| rs4657178 | |||||||||||||||
| Genetypes | |||||||||||||||
| CC | 92 (26.3) | 149 (28.5) | 60 (27.5) | 73 (29.3) | 32 (24.2) | 76 (27.8) | |||||||||
| TT | 32 (9.1) | 100 (19.2) | 19 (8.7) | 44 (17.7) | 13 (9.8) | 56 (20.5) | |||||||||
| CC | 226 (64.6) | 273 (52.3) | 19.782a | <0.01 | 139 (63.8) | 132 (53.0) | 9.356a | 0.009 | 87 (65.9) | 141 (51.6) | 9.585a | 0.008 | |||
| Alleles | |||||||||||||||
| C | 410 (58.6) | 571 (54.7) | 0.854(0.704-1036) | 259 (59.4) | 278 (55.8) | 0.864(0.666-1.120) | 151 (57.2) | 293 (53.7) | 1.154(0.858-1.552) | ||||||
| T | 290 (41.4) | 473 (45.3) | 2.561a | 0.115 | 177 (40.6) | 220 (44.2) | 1.219a | 0.289 | 113 (42.8) | 253 (46.3) | 0.897a | 0.366 | |||
| Recessive models | |||||||||||||||
| TT | 318 (90.9) | 42 (80.8) | 0.425 | 199 (91.3) | 205 (82.3) | 0.445(0.251-0.788) | 119 (90.2) | 217 (79.5) | 2.362(1.241-4.496) | ||||||
| TC + CC | 32 (9.1) | 100 (19.2) | 16.356a | <0.01 | 19 (8.7) | 44 (17.7) | 7.987a | 0.006 | 13 (9.8) | 56 (20.5) | 7.159a | 0.011 | |||
| Dominant models | |||||||||||||||
| TC + TT | 258 (73.7) | 373 (71.5) | 1.120(0.826-1.519) | 158 (72.5) | 176 (70.7) | 1.092(0.730-1.635) | 100 (75.8) | 197 (72.2) | 0.829(0.514-1.338) | ||||||
| CC | 92 (26.3) | 149 (28.5) | 0.534a | 0.487 | 60 (27.5) | 73 (29.3) | 0.184a | 0.682 | 32 (24.2) | 76 (27.8) | 0.589a | 0.474 | |||
| rs6704393 Genetypes | |||||||||||||||
| TT | 16 (4.6) | 40 (7.7) | 9 (4.1) | 23 (9.2) | 7 (5.3) | 17 (6.2) | |||||||||
| CC | 146 (41.7) | 263 (50.4) | 89 (40.8) | 118 (47.4) | 57 (43.2) | 145 (53.1) | |||||||||
| TC | 188 (53.7) | 219 (42.0) | 12.683a | 0.002 | 120 (55.0) | 108 (43.4) | 8.800a | 0.012 | 68 (51.5) | 111 (40.7) | 4.260a | 0.120 | |||
| Alleles | |||||||||||||||
| T | 220 (31.4) | 299 (28.6) | 1.142(0.927-1.407) | 138 (31.7) | 154 (30.9) | 1.034(0.784-1.365) | 82 (31.1) | 145 (26.6) | 1.246(0.902-1.720) | ||||||
| C | 480 (68.6) | 745 (71.4) | 1.559a | 0.219 | 298 (68.3) | 344 (69.1) | 0.057a | 0.832 | 182 (68.9) | 401 (73.4) | 1.790a | 0.183 | |||
| Recessive models | |||||||||||||||
| TT | 334 (95.4) | 482 (92.3) | 0.577(0.318-1.048) | 209 (95.9) | 226 (90.8) | 0.423(0.191-0.935) | 125 (94.7) | 256 (93.8) | 0.843(0.341-2.086) | ||||||
| TC+CC | 16 (4.57) | 40 (7.7) | 3.332a | 0.090 | 9 (4.1) | 23 (9.2) | 4.752a | 0.042 | 7 (5.3) | 17 (6.2) | 0.136a | 0.825 | |||
| Dominant models | |||||||||||||||
| TC+TT | 204 (58.3) | 259 (49.6) | 1.419 | 129 (59.2) | 131 (52.6) | 1.306(0.904-1.885) | 75 (56.8) | 128 (46.9) | 1.491(0.981-2.265) | ||||||
| CC | 146 (41.7) | 263 (50.4) | 6.322a | 0.013 | 89 (40.8) | 118 (47.4) | 2.029a | 0.162 | 57 (43.2) | 145 (53.1) | 3.511a | 0.071 |
aIndicates statistical significance. SNP – Singlenucleotide polymorphisms; OR – Odds ratio; CI – Confidence interval
Figure 5Linkage disequilibrium plots for the four analyzed SNPs of the whole schizophrenic patients and healthy controls
Figure 6Linkage disequilibrium plots for the four analyzed SNPs of the male schizophrenic patients and healthy controls
Figure 7Linkage disequilibrium plots for the four analyzed SNPs of the female schizophrenic patients and healthy controls
Distribution of haplotypes for the three analyzed single-nucleotide polymorphisms between schizophrenic patients and healthy controls
| Haplotype | Whole frequency | Whole case-control ratio |
|
| Male frequency | Male case-control ratio |
|
| Female frequency | Female case-control ratio |
|
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CCC | 0.365 | 0.386:0.351 | 2.228 | 0.136 | 0.359 | 0.385:0.337 | 2.345 | 0.126 | 0.372 | 0.384:0.366 | 0.252 | 0.616 |
| TTT | 0.189 | 0.187:0.190 | 0.022 | 0.883 | 0.182 | 0.177:0.186 | 0.131 | 0.717 | 0.196 | 0.200:0.194 | 0.044 | 0.833 |
| CTT | 0.142 | 0.126:0.152 | 2.234 | 0.135 | 0.131 | 0.124:0.137 | 0.359 | 0.549 | 0.155 | 0.131:0.166 | 1.617 | 0.204 |
| CTC | 0.106 | 0.099:0.111 | 0.658 | 0.417 | 0.102 | 0.094:0.108 | 0.493 | 0.483 | 0.110 | 0.106:0.113 | 0.087 | 0.768 |
| CCT | 0.089 | 0.074:0.099 | 3.309 | 0.069 | 0.096 | 0.080:0.108 | 2.155 | 0.142 | 0.083 | 0.068:0.090 | 1.116 | 0.291 |
| TTC | 0.078 | 0.083:0.075 | 0.411 | 0.522 | 0.096 | 0.093:0.099 | 0.073 | 0.786 | 0.059 | 0.071:0.054 | 0.933 | 0.334 |
| TCT | 0.018 | 0.027:0.012 | 5.215 | 0.022 | 0.017 | 0.025:0.010 | 3.078 | 0.079 | 0.019 | 0.029:0.014 | 2.065 | 0.151 |
| TCC | 0.013 | 0.017:0.010 | 1.883 | 0.170 | 0.018 | 0.021:0.015 | 0.614 | 0.433 | <0.01 |