| Literature DB >> 35488185 |
Lotta E Ivaska1, Antti Silvoniemi1, Emilia Mikola1,2, Tuomo Puhakka1, Matti Waris3,4, Tytti Vuorinen3,4, Tuomas Jartti5,6,7.
Abstract
Adenoids and tonsils have gained interest as a new in vivo model to study local immune functions and virus reservoirs. Especially herpesviruses are interesting because their prevalence and persistence in local lymphoid tissue are incompletely known. Our aim was to study herpesvirus and common respiratory virus infections in nonacutely ill adenotonsillar surgery patients. Adenoid and/or palatine tonsil tissue and nasopharyngeal aspirate (NPA) samples were collected from elective adenoidectomy (n = 45) and adenotonsillectomy (n = 44) patients (median age: 5, range: 1-20). Real-time polymerase chain reaction was used to detect 22 distinct viruses from collected samples. The overall prevalence of herpesviruses was 89% and respiratory viruses 94%. Human herpesviruses 6 (HHV6), 7 (HHV7), and Epstein-Barr virus (EBV) were found, respectively, in adenoids (33%, 26%, 25%), tonsils (45%, 52%, 23%), and NPA (46%, 38%, 25%). Copy numbers of the HHV6 and HHV7 genome were significantly higher in tonsils than in adenoids. Patients with intra-adenoid HHV6 were younger than those without. Detection rates of EBV and HHV7 showed agreement between corresponding sample types. This study shows that adenoid and tonsil tissues commonly harbor human herpes- and respiratory viruses, and it shows the differences in virus findings between sample types.Entities:
Keywords: Epstein-Barr virus; adenoid; human herpesvirus 6; human herpesvirus 7; nasopharyngeal aspirate; palatine tonsil; respiratory viruses
Mesh:
Year: 2022 PMID: 35488185 PMCID: PMC9545566 DOI: 10.1002/jmv.27818
Source DB: PubMed Journal: J Med Virol ISSN: 0146-6615 Impact factor: 20.693
Detected viruses in nasopharyngeal aspirate, intra‐adenoid, and intratonsillar samples.
| Virus | Intra‐adenoid ( | Intratonsillar ( | Nasopharyngeal ( | |||
|---|---|---|---|---|---|---|
| With or without other virus | Sole | With or without other virus | Sole | With or without other virus | Sole | |
| Human herpesvirus 6 | 29 (33%) | 1 (1%) | 20 (45%) | 5 (11%) | 41 (46%) | 0 |
| Human herpesvirus 7 | 23 (26%) | 1 (1%) | 23 (52%) | 6 (14%) | 34 (38%) | 1 (1%) |
| Epstein–Barr virus | 22 (25%) | 2 (2%) | 10 (23%) | 0 | 22 (25%) | 1 (1%) |
| Cytomegalovirus | 1 (1%) | 0 | 0 | 0 | 13 (15%) | 0 |
| Herpes simplex virus 1 | 1 (1%) | 0 | 0 | 0 | 2 (2%) | 0 |
| Herpes simplex virus 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| Varicella‐zoster virus | 0 | 0 | 0 | 0 | 0 | 0 |
| Rhinovirus | 53 (60%) | 4 (4%) | 3 (7%) | 0 | 56 (63%) | 9 (10%) |
| Human bocavirus | 52 (58%) | 3 (3%) | 10 (23%) | 1 (2%) | 31 (35%) | 1 (1%) |
| Adenovirus | 11 (12%) | 1 (1%) | 8 (18%) | 0 | 23 (26%) | 1 (1%) |
| Enterovirus | 6 (7%) | 0 | 7 (16%) | 2 (5%) | 9 (10%) | 0 |
| Coronavirus | 1 (1%) | 1 (1%) | 0 | 0 | 8 (9%) | 1 (1%) |
| Parainfluenza virus types 1–4 | 12 (13%) | 2 (2%) | 3 (7%) | 0 | 6 (7%) | 0 |
| Influenza A or B virus | 1 (1%) | 0 | 0 | 0 | 4 (4%) | 1 (1%) |
| Respiratory syncytial virus | 8 (9%) | 0 | 2 (5%) | 0 | 2 (2%) | 0 |
| Metapneumovirus | 0 | 0 | 1 (2%) | 0 | 0 | 0 |
| No virus findings | 3 (3%) | 2 (5%) | 5 (6%) | |||
| ≥1 viruses | 86 (97%) | 42 (95%) | 84 (94%) | |||
Note: Values are expressed as number of positive findings (%) n = 89 or n = 44.
Coronavirus types 229E, NL63, OC43, or HKU1.
DNA levels of human herpesvirus 6 (HHV6), human herpesvirus 7 (HHV7), and Epstein–Barr virus (EBV) in adenoid and tonsil tissue samples of adenotonsillectomy patients (Wilcoxon signed rank test).
| Virus | Virus DNA copies/mm3 tissue, mean (range), in adenoid tissue ( | Virus DNA copies/mm3 tissue, mean (range), in tonsil tissue ( |
|
|---|---|---|---|
| HHV6 | 5.5 (0–62.5) | 81.9 (0–1137) | 0.002 |
| HHV7 | 12.3 (0–79.1) | 95.3 (0–1107) | <0.001 |
| EBV | 37.5 (0–873.6) | 4807.6 (0–205 071) | 0.12 |
Site of the virus findings.
| Virus | Any site ( | Adenoid only ( | Tonsil only ( | NPA only ( | Tonsil | Adenoid and NPA ( | Tonsil | All sites ( |
|---|---|---|---|---|---|---|---|---|
| Human herpesvirus 6 | 60 (67%) | 7 (8%) | 7 (16%) | 19 (21%) | 5 (11%) | 14 (16%) | 5 (11%) | 3 (7%) |
| Human herpesvirus 7 | 45 (50%) | 3 (3%) | 4 (9%) | 12 (13%) | 4 (9%) | 7 (8%) | 6 (14%) | 9 (20%) |
| Epstein–Barr virus | 31 (35%) | 5 (6%) | 2 (5%) | 6 (7%) | 2 (5%) | 10 (11%) | 1 (2%) | 5 (11%) |
| Cytomegalovirus | 13 (15%) | 0 | 0 | 12 (13%) | 0 | 1 (1%) | 0 | 0 |
| Herpes simplex virus 1 | 2 (2%) | 0 | 0 | 1 (1%) | 0 | 1 (1%) | 0 | 0 |
| Herpes simplex virus 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Varicella‐zoster virus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Rhinovirus | 70 (79%) | 14 (16%) | 0 | 16 (18%) | 0 | 37 (42%) | 1 (2%) | 2 (5%) |
| Human bocavirus | 58 (65%) | 22 (25%) | 2 (5%) | 4 (4%) | 3 (7%) | 22 (25%) | 0 | 5 (11%) |
| Adenovirus | 31 (35%) | 2 (2%) | 3 (7%) | 16 (18%) | 3 (7%) | 5 (6%) | 1 (2%) | 1 (2%) |
| Enterovirus | 14 (16%) | 0 | 3 (7%) | 4 (4%) | 2 (5%) | 3 (3%) | 1 (2%) | 1 (2%) |
| Coronavirus | 8 (9%) | 0 | 0 | 7 (8%) | 0 | 1 (1%) | 0 | 0 |
| Parainfluenza virus types 1–4 | 17 (19%) | 8 (9%) | 3 (7%) | 2 (2%) | 0 | 4 (4%) | 0 | 0 |
| Influenza A or B | 4 (4%) | 0 | 0 | 3 (3%) | 0 | 1 (1%) | 0 | 0 |
| Respiratory syncytial virus | 11 (12%) | 7 (8%) | 2 (5%) | 1 (1%) | 0 | 1 (1%) | 0 | 0 |
| Metapneumovirus | 1 (1%) | 0 | 1 (2%) | 0 | 0 | 0 | 0 | 0 |
Tonsil samples from adenotonsillectomy patients, n = 44.
Coronaviruses 229E, OC43, NL63, and HKU1.
Figure 1Age distributions of human herpesvirus 6 (HHV6) positive and negative patients. Patients with intra‐adenoid HHV6‐positive findings were younger (median age 3) compared to patients with negative polymerase chain reaction test (median age 6).
Comparison of adenoid versus tonsil, adenoid versus NPA, and NPA versus tonsil virus detections.
| Adenoid versus tonsil ( | Adenoid versus NPA ( | NPA versus tonsil ( | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Virus | Adenoid PCR | Tonsil PCR | Kappa coefficient (95% CI) | Adenoid PCR | NPA PCR | Kappa coefficient (95% CI) | NPA PCR | Tonsil PCR | Kappa coefficient (95% CI) | |||
| neg | pos | neg | pos | neg | pos | |||||||
| HHV6 | neg | 20 (83%) | 12 (60%) | ‐ | neg | 36 (75%) | 24 (58%) | ‐ | neg | 13 (54%) | 12 (60%) | ‐ |
| pos | 4 (17%) | 8 (40%) | 0.24 (−0.029, 0.51) | pos | 12 (25%) | 17 (42%) | 0.17 (−0.03, 0.37) | pos | 11 (46%) | 8 (40%) | −0.059 (−0.35, 0.23) | |
| HHV7 | neg | 21 (100%) | 10 (43%) | ‐ | neg | 48 (87%) | 18 (53%) | ‐ | neg | 15 (71%) | 8 (35%) | ‐ |
| pos | 0 (0%) | 13 (57%) |
| pos | 7 (13%) | 16 (47%) | 0.37 (0.17, 0.56) | pos | 6 (29%) | 15 (65%) | 0.37 (0.091, 0.64) | |
| EBV | neg | 32 (94%) | 3 (30%) | ‐ | neg | 60 (90%) | 7 (32%) | ‐ | neg | 31 (91%) | 4 (40%) | ‐ |
| pos | 2 (6%) | 7 (70%) |
| pos | 7 (10%) | 15 (68%) |
| pos | 3 (9%) | 6 (60%) |
| |
| RV | neg | 18 (44%) | 1 (33%) | ‐ | neg | 19 (58%) | 17 (30%) | ‐ | neg | 14 (34%) | 0 (0%) | ‐ |
| pos | 23 (56%) | 2 (67%) | 0.024 (−0.11, 0.15) | pos | 14 (42%) | 39 (70%) | 0.27 (0.063, 0.47) | pos | 27 (66%) | 3 (100%) | 0.066 (−0.012, 0.14) | |
| HBoV1 | neg | 21 (63%) | 2 (20%) | ‐ | neg | 33 (57%) | 4 (13%) | ‐ | neg | 23 (67%) | 5 (50%) | ‐ |
| pos | 13 (37%) | 8 (80%) | 0.301 (0.056, 0.55) | pos | 25 (43%) | 27 (87%) | 0.38 (0.21, 0.55) | pos | 11 (33%) | 5 (50%) | 0.146 (−0.14, 0.44) | |
Note: Values are expressed as n (%). Bold values indicates Kappa coefficient ≥ 0.40 to < 0.75 (means fair to good agreement).
Abbreviations: CI, confidence interval; EBV, Epstein–Barr virus; HBoV1, human bocavirus 1; HHV6, human herpesvirus 6; HHV7, human herpesvirus 7; NPA, nasopharyngeal aspirate; PCR, polymerase chain reaction; RV, rhinovirus