Literature DB >> 35482840

Harnessing Big Data to Advance Treatment and Understanding of Pulmonary Hypertension.

Christopher J Rhodes1, Andrew J Sweatt1, Bradley A Maron2,3.   

Abstract

Pulmonary hypertension is a complex disease with multiple causes, corresponding to phenotypic heterogeneity and variable therapeutic responses. Advancing understanding of pulmonary hypertension pathogenesis is likely to hinge on integrated methods that leverage data from health records, imaging, novel molecular -omics profiling, and other modalities. In this review, we summarize key data sets generated thus far in the field and describe analytical methods that hold promise for deciphering the molecular mechanisms that underpin pulmonary vascular remodeling, including machine learning, network medicine, and functional genetics. We also detail how genetic and subphenotyping approaches enable earlier diagnosis, refined prognostication, and optimized treatment prediction. We propose strategies that identify functionally important molecular pathways, bolstered by findings across multi-omics platforms, which are well-positioned to individualize drug therapy selection and advance precision medicine in this highly morbid disease.

Entities:  

Keywords:  big data; information dissemination; phenotype; precision medicine; pulmonary arterial hypertension

Mesh:

Year:  2022        PMID: 35482840      PMCID: PMC9070103          DOI: 10.1161/CIRCRESAHA.121.319969

Source DB:  PubMed          Journal:  Circ Res        ISSN: 0009-7330            Impact factor:   23.213


  119 in total

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Journal:  JAMA       Date:  2019-05-28       Impact factor: 56.272

2.  Systemic sclerosis associated pulmonary hypertension: improved survival in the current era.

Authors:  M H Williams; C Das; C E Handler; M R Akram; J Davar; C P Denton; C J Smith; C M Black; J G Coghlan
Journal:  Heart       Date:  2005-12-09       Impact factor: 5.994

Review 3.  A proposed mitochondrial-metabolic mechanism for initiation and maintenance of pulmonary arterial hypertension in fawn-hooded rats: the Warburg model of pulmonary arterial hypertension.

Authors:  Jalees Rehman; Stephen L Archer
Journal:  Adv Exp Med Biol       Date:  2010       Impact factor: 2.622

4.  Metabolic Profiling of Right Ventricular-Pulmonary Vascular Function Reveals Circulating Biomarkers of Pulmonary Hypertension.

Authors:  Gregory D Lewis; Debby Ngo; Anna R Hemnes; Laurie Farrell; Carly Domos; Paul P Pappagianopoulos; Bishnu P Dhakal; Amanda Souza; Xu Shi; Meredith E Pugh; Arkadi Beloiartsev; Sumita Sinha; Clary B Clish; Robert E Gerszten
Journal:  J Am Coll Cardiol       Date:  2016-01-19       Impact factor: 24.094

5.  Metabolic and Proliferative State of Vascular Adventitial Fibroblasts in Pulmonary Hypertension Is Regulated Through a MicroRNA-124/PTBP1 (Polypyrimidine Tract Binding Protein 1)/Pyruvate Kinase Muscle Axis.

Authors:  Hui Zhang; Daren Wang; Min Li; Lydie Plecitá-Hlavatá; Angelo D'Alessandro; Jan Tauber; Suzette Riddle; Sushil Kumar; Amanda Flockton; B Alexandre McKeon; Maria G Frid; Julie A Reisz; Paola Caruso; Karim C El Kasmi; Petr Ježek; Nicholas W Morrell; Cheng-Jun Hu; Kurt R Stenmark
Journal:  Circulation       Date:  2017-09-26       Impact factor: 29.690

6.  Rare variant analysis of 4241 pulmonary arterial hypertension cases from an international consortium implicates FBLN2, PDGFD, and rare de novo variants in PAH.

Authors:  Na Zhu; Emilia M Swietlik; Carrie L Welch; Michael W Pauciulo; Nicholas W Morrell; Yufeng Shen; Stefan Gräf; William C Nichols; Wendy K Chung; Jacob J Hagen; Xueya Zhou; Yicheng Guo; Johannes Karten; Divya Pandya; Tobias Tilly; Katie A Lutz; Jennifer M Martin; Carmen M Treacy; Erika B Rosenzweig; Usha Krishnan; Anna W Coleman; Claudia Gonzaga-Jauregui; Allan Lawrie; Richard C Trembath; Martin R Wilkins
Journal:  Genome Med       Date:  2021-05-10       Impact factor: 15.266

7.  Plasma Metabolomics Implicates Modified Transfer RNAs and Altered Bioenergetics in the Outcomes of Pulmonary Arterial Hypertension.

Authors:  Christopher J Rhodes; Pavandeep Ghataorhe; John Wharton; Kevin C Rue-Albrecht; Charaka Hadinnapola; Geoffrey Watson; Marta Bleda; Matthias Haimel; Gerry Coghlan; Paul A Corris; Luke S Howard; David G Kiely; Andrew J Peacock; Joanna Pepke-Zaba; Mark R Toshner; S John Wort; J Simon R Gibbs; Allan Lawrie; Stefan Gräf; Nicholas W Morrell; Martin R Wilkins
Journal:  Circulation       Date:  2016-11-21       Impact factor: 29.690

8.  Metabolic pathways associated with right ventricular adaptation to pulmonary hypertension: 3D analysis of cardiac magnetic resonance imaging.

Authors:  Mark I Attard; Timothy J W Dawes; Antonio de Marvao; Carlo Biffi; Wenzhe Shi; John Wharton; Christopher J Rhodes; Pavandeep Ghataorhe; J Simon R Gibbs; Luke S G E Howard; Daniel Rueckert; Martin R Wilkins; Declan P O'Regan
Journal:  Eur Heart J Cardiovasc Imaging       Date:  2019-06-01       Impact factor: 6.875

9.  Novel risk genes and mechanisms implicated by exome sequencing of 2572 individuals with pulmonary arterial hypertension.

Authors:  Na Zhu; Michael W Pauciulo; Carrie L Welch; Yufeng Shen; Wendy K Chung; William C Nichols; Katie A Lutz; Anna W Coleman; Claudia Gonzaga-Jauregui; Jiayao Wang; Joseph M Grimes; Lisa J Martin; Hua He
Journal:  Genome Med       Date:  2019-11-14       Impact factor: 11.117

10.  Are drug targets with genetic support twice as likely to be approved? Revised estimates of the impact of genetic support for drug mechanisms on the probability of drug approval.

Authors:  Emily A King; J Wade Davis; Jacob F Degner
Journal:  PLoS Genet       Date:  2019-12-12       Impact factor: 5.917

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