Literature DB >> 35474556

Nested U-Net for Segmentation of Red Lesions in Retinal Fundus Images and Sub-image Classification for Removal of False Positives.

Swagata Kundu1, Vikrant Karale2, Goutam Ghorai3, Gautam Sarkar3, Sambuddha Ghosh4, Ashis Kumar Dhara5.   

Abstract

Diabetic retinopathy is a pathological change of the retina that occurs for long-term diabetes. The patients become symptomatic in advanced stages of diabetic retinopathy resulting in severe non-proliferative diabetic retinopathy or proliferative diabetic retinopathy stages. There is a need of an automated screening tool for the early detection and treatment of patients with diabetic retinopathy. This paper focuses on the segmentation of red lesions using nested U-Net Zhou et al. (Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support, Springer, 2018) followed by removal of false positives based on the sub-image classification method. Different sizes of sub-images were studied for the reduction in false positives in the sub-image classification method. The network could capture semantic features and fine details due to dense convolutional blocks connected via skip connections in between down sampling and up sampling paths. False-negative candidates were very few and the sub-image classification network effectively reduced the falsely detected candidates. The proposed framework achieves a sensitivity of [Formula: see text], precision of [Formula: see text], and F1-Score of [Formula: see text] for the DIARETDB1 data set Kalviainen and Uusutalo (Medical Image Understanding and Analysis, Citeseer, 2007). It outperforms the state-of-the-art networks such as U-Net Ronneberger et al. (International Conference on Medical Image Computing and Computer-Assisted Intervention, Springer, 2015) and attention U-Net Oktay et al. (Attention u-net: Learning where to look for the pancreas, 2018).
© 2022. The Author(s) under exclusive licence to Society for Imaging Informatics in Medicine.

Entities:  

Keywords:  Diabetic retinopathy; Fundus images; Nested U-Net; Segmentation of red lesions; Sub-image classification

Mesh:

Year:  2022        PMID: 35474556      PMCID: PMC9582103          DOI: 10.1007/s10278-022-00629-4

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.903


  16 in total

1.  Points of interest and visual dictionaries for automatic retinal lesion detection.

Authors:  A Rocha; T Carvalho; H F Jelinek; S Goldenstein; J Wainer
Journal:  IEEE Trans Biomed Eng       Date:  2012-05-30       Impact factor: 4.538

2.  A study on hemorrhage detection using hybrid method in fundus images.

Authors:  Jang Pyo Bae; Kwang Gi Kim; Ho Chul Kang; Chang Bu Jeong; Kyu Hyung Park; Jeong-Min Hwang
Journal:  J Digit Imaging       Date:  2011-06       Impact factor: 4.056

3.  Automatic detection of microaneurysms in color fundus images.

Authors:  Thomas Walter; Pascale Massin; Ali Erginay; Richard Ordonez; Clotilde Jeulin; Jean-Claude Klein
Journal:  Med Image Anal       Date:  2007-05-26       Impact factor: 8.545

4.  Exudate detection in color retinal images for mass screening of diabetic retinopathy.

Authors:  Xiwei Zhang; Guillaume Thibault; Etienne Decencière; Beatriz Marcotegui; Bruno Laÿ; Ronan Danno; Guy Cazuguel; Gwénolé Quellec; Mathieu Lamard; Pascale Massin; Agnès Chabouis; Zeynep Victor; Ali Erginay
Journal:  Med Image Anal       Date:  2014-05-22       Impact factor: 8.545

5.  Automated microaneurysm detection using local contrast normalization and local vessel detection.

Authors:  Alan D Fleming; Sam Philip; Keith A Goatman; John A Olson; Peter F Sharp
Journal:  IEEE Trans Med Imaging       Date:  2006-09       Impact factor: 10.048

6.  UNet++: A Nested U-Net Architecture for Medical Image Segmentation.

Authors:  Zongwei Zhou; Md Mahfuzur Rahman Siddiquee; Nima Tajbakhsh; Jianming Liang
Journal:  Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018)       Date:  2018-09-20

7.  Clinical Report Guided Retinal Microaneurysm Detection With Multi-Sieving Deep Learning.

Authors:  Ling Dai; Ruogu Fang; Huating Li; Xuhong Hou; Bin Sheng; Qiang Wu; Weiping Jia
Journal:  IEEE Trans Med Imaging       Date:  2018-05       Impact factor: 10.048

8.  Red Lesion Detection Using Dynamic Shape Features for Diabetic Retinopathy Screening.

Authors:  Lama Seoud; Thomas Hurtut; Jihed Chelbi; Farida Cheriet; J M Pierre Langlois
Journal:  IEEE Trans Med Imaging       Date:  2015-12-17       Impact factor: 10.048

9.  Optimal wavelet transform for the detection of microaneurysms in retina photographs.

Authors:  Gwénolé Quellec; Mathieu Lamard; Pierre Marie Josselin; Guy Cazuguel; Béatrice Cochener; Christian Roux
Journal:  IEEE Trans Med Imaging       Date:  2008-09       Impact factor: 10.048

10.  Microaneurysm Detection Using Principal Component Analysis and Machine Learning Methods.

Authors:  Wen Cao; Nicholas Czarnek; Juan Shan; Lin Li
Journal:  IEEE Trans Nanobioscience       Date:  2018-05-24       Impact factor: 2.935

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