| Literature DB >> 35463351 |
Bo Liu1,2, Shan Meng3, Jie Cheng4, Yan Zeng2, Daiquan Zhou2, Xiaojuan Deng2, Lianqin Kuang2, Xiaojia Wu1, Lin Tang1, Haolin Wang5, Huan Liu6, Chen Liu7, Chuanming Li1.
Abstract
Purpose: To investigate whether the combination of radiomics derived from brain high-resolution T1-weighted imaging and automatic machine learning could diagnose subcortical ischemic vascular cognitive impairment with no dementia (SIVCIND) accurately.Entities:
Keywords: diagnosis; high-resolution T1-weighted imaging; machine learning; radiomics; subcortical ischemic vascular cognitive impairment with no dementia
Year: 2022 PMID: 35463351 PMCID: PMC9027106 DOI: 10.3389/fonc.2022.852726
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Figure 1The framework of the radiomics workflow. (A) Data preprocessing and cortex/subcortical brain region segmentation. (B) Three categories of radiomics feature extraction. (C) Employing the least absolute shrinkage and selection operator (LASSO) algorithm to reduce the redundancy feature.
Clinical characteristics and demographics of the SIVCIND and normal control subjects.
| NM (n = 76) | SIVCIND (n = 40) |
|
| |
|---|---|---|---|---|
| Gender (male/female) | 34/42 | 20/20 | – | 0.589 |
| Age (years) | 62.9 ± 7.7(42–83) | 63.6 ± 9.4(47–83) | −0.368 | >0.05 |
| Education (years) | 9.4 ± 4.0(0–17) | 9.1 ± 4.3(0–17) | 0.289 | >0.05 |
| MoCA | 27.1 ± 2.1(18–30) | 18.6 ± 5.0 (6–26) | −10.124 | <0.001 |
| MMSE | 28.1 ± 1.5(23–30) | 24.6 ± 3.0 (8–30) | −7.930 | <0.001 |
| ADL | – | 26.8 ± 10.4 (20–60) | – | – |
Data are expressed as mean ± SD (range from min–max).
MoCA, Montreal Cognitive Assessment; MMSE, Mini-Mental State Examination; ADL, Activities of Daily Living Scale; NM, normal controls; SIVCIND, subcortical ischemic vascular cognitive impairment with no dementia.
The p-value was acquired by Pearson’s chi-squared test.
The p-value was acquired by two-sample t-test.
The radiomics features in the optimal subset.
| Location | Category | Feature |
|---|---|---|
| Left putamen | First-order statistics features | CS |
| Left thalamus | First-order statistics features | Maximum |
| Right amygdala | Higher-order statistics features | Entropy-LHL |
| Right amygdala | Higher-order statistics features | HGLRE-LHL |
| Left caudate nucleus | Higher-order statistics features | SRE-HLH |
| Right hippocampus | Higher-order statistics features | LGLRE-LLH |
| Left nucleus accumbens | Higher-order statistics features | IMC2-LLL |
| Left nucleus accumbens | Higher-order statistics features | CS-HLH |
| Left nucleus accumbens | Higher-order statistics features | LRLGLE-LLH |
| Right nucleus accumbens | Higher-order statistics features | Correlation-HHH |
| Left putamen | Higher-order statistics features | Contrast-HHL |
| Left putamen | Higher-order statistics features | SRE-LLH |
| Left thalamus | Higher-order statistics features | SRE-HHH |
Higher-order statistics features were derived from wavelet transformation including the first-order statistics features and texture features in eight directions (HLL, LLL, HLH, HHL, LLH, LHH, LHL, and HHH).
SRE, short run emphasis; LGLRE, low gray-level run emphasis; HGLRE, high gray-level run emphasis; CS, cluster shade; IMC2, informational measure of correlation 2; LRLGLE, long run low gray-level emphasis.
Figure 2The receiver operator characteristic (ROC) curves of the radiomics models for discriminating the normal controls (NM) and subcortical ischemic vascular cognitive impairment with no dementia (SIVCIND) subjects. (A) ROC curve of logistic regression (LR) (area under the ROC curve (AUC) = 0.934). (B) ROC curve of support vector machine (SVM) (AUC = 0.969). (C) ROC curve of random forest (RF) (AUC = 0.990).
Figure 3The results of the 10 times 10-fold cross-validation of our models. (A) Box plots of logistic regression (LR). (B) Box plots of support vector machine (SVM). (C) Box plots of random forest (RF). ACC, accuracy; AUC, area under the curve; NPV, negative predictive value; PPV, positive predictive value.
Correlation tests between radiomics features of optimal subset and MoCA, MMSE, and ADL cores.
| Item/location | Feature | Correlation coefficient |
|
|---|---|---|---|
| MoCA | |||
| Left putamen | CS | 0.182 | 0.275 |
| Left thalamus | Maximum | −0.111 | 0.508 |
| Right amygdala | Entropy-LHL | 0.256 | 0.121 |
| Right amygdala | HGLRE-LHL | 0.425 | 0.008 |
| Left caudate nucleus | SRE-HLH | 0.472 | 0.003 |
| Right hippocampus | LGLRE-LLH | −0.089 | 0.597 |
| Left nucleus accumbens | IMC2-LLL | −0.293 | 0.074 |
| Left nucleus accumbens | CS-HLH | 0.047 | 0.777 |
| Left nucleus accumbens | LRLGLE-LLH | −0.052 | 0.756 |
| Right nucleus accumbens | Correlation-HHH | 0.153 | 0.358 |
| Left putamen | Contrast-HHL | 0.079 | 0.636 |
| Left putamen | SRE-LLH | 0.105 | 0.532 |
| Left thalamus | SRE-HHH | 0.429 | 0.007 |
| MMSE | |||
| Left putamen | CS | 0.346 | 0.049 |
| Left thalamus | Maximum | 0.112 | 0.535 |
| Right amygdala | Entropy-LHL | 0.071 | 0.696 |
| Right amygdala | HGLRE-LHL | 0.072 | 0.689 |
| Left caudate nucleus | SRE-HLH | 0.382 | 0.028 |
| Right hippocampus | LGLRE-LLH | 0.264 | 0.137 |
| Left nucleus accumbens | IMC2-LLL | −0.033 | 0.855 |
| Left nucleus accumbens | CS-HLH | −0.122 | 0.499 |
| Left nucleus accumbens | LRLGLE-LLH | 0.122 | 0.498 |
| Right nucleus accumbens | Correlation-HHH | 0.037 | 0.836 |
| Left putamen | Contrast-HHL | −0.029 | 0.872 |
| Left putamen | SRE-LLH | 0.185 | 0.301 |
| Left thalamus | SRE-HHH | 0.254 | 0.154 |
| ADL | |||
| Left putamen | CS | −0.019 | 0.919 |
| Left thalamus | Maximum | 0.099 | 0.591 |
| Right amygdala | Entropy-LHL | −0.059 | 0.747 |
| Right amygdala | HGLRE-LHL | 0.209 | 0.251 |
| Left caudate nucleus | SRE-HLH | −0.435 | 0.013 |
| Right hippocampus | LGLRE-LLH | −0.148 | 0.418 |
| Left nucleus accumbens | IMC2-LLL | −0.189 | 0.302 |
| Left nucleus accumbens | CS-HLH | 0.022 | 0.905 |
| Left nucleus accumbens | LRLGLE-LLH | −0.213 | 0.242 |
| Right nucleus accumbens | Correlation-HHH | −0.049 | 0.789 |
| Left putamen | Contrast-HHL | −0.183 | 0.314 |
| Left putamen | SRE-LLH | −0.031 | 0.865 |
| Left thalamus | SRE-HHH | −0.249 | 0.169 |
Higher-order statistics features were derived from wavelet transformation including the first-order statistics features and texture features in eight directions (HLL, LLL, HLH, HHL, LLH, LHH, LHL, and HHH).
SRE, short run emphasis; LGLRE, low gray-level run emphasis; HGLRE, high gray-level run emphasis; CS, cluster shade; IMC2, informational measure of correlation 2; LRLGLE, long run low gray-level emphasis; MoCA, Montreal Cognitive Assessment; MMSE, Mini-Mental State Examination; ADL, Activities of Daily Living Scale.
Significant correlation (p < 0.05).