| Literature DB >> 35458885 |
Antoine Serrurier1,2, Christiane Neuschaefer-Rube2, Rainer Röhrig1.
Abstract
Cough is a very common symptom and the most frequent reason for seeking medical advice. Optimized care goes inevitably through an adapted recording of this symptom and automatic processing. This study provides an updated exhaustive quantitative review of the field of cough sound acquisition, automatic detection in longer audio sequences and automatic classification of the nature or disease. Related studies were analyzed and metrics extracted and processed to create a quantitative characterization of the state-of-the-art and trends. A list of objective criteria was established to select a subset of the most complete detection studies in the perspective of deployment in clinical practice. One hundred and forty-four studies were short-listed, and a picture of the state-of-the-art technology is drawn. The trend shows an increasing number of classification studies, an increase of the dataset size, in part from crowdsourcing, a rapid increase of COVID-19 studies, the prevalence of smartphones and wearable sensors for the acquisition, and a rapid expansion of deep learning. Finally, a subset of 12 detection studies is identified as the most complete ones. An unequaled quantitative overview is presented. The field shows a remarkable dynamic, boosted by the research on COVID-19 diagnosis, and a perfect adaptation to mobile health.Entities:
Keywords: automatic cough sound processing; cough diagnosis; cough recognition; cough sound acquisition; literature review; machine learning; quantitative analysis
Mesh:
Year: 2022 PMID: 35458885 PMCID: PMC9027375 DOI: 10.3390/s22082896
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.847
Figure 1Waveform of a cough superimposed with the phases corresponding to the act (top text, orange) and to the sound (bottom text, green). The horizontal (time) and vertical (amplitude) axes have been omitted to provide a simpler schematic overview.
Cough classification studies and their classes.
| Ref. | Cough Type | Subject Characteristics | Lung Condition | Disease | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Wet | Dry | Productive | Non-Productive | Spontaneous | Voluntary | Induced | Healthy | Unhealthy | Male | Female | Obstructive | Restrictive | Normal | Croup | Pneumonia | Asthma | Pertussis | COPD | Heart Failure | Tuberculosis | Bronchitis | Bronchiolitis | COVID-19 | Cold | LRTD | Upper RespiratoryTract Disease | n/a | |
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Cough detection studies per motivation.
| Motivation | References | Number |
|---|---|---|
| Objective monitoring | [ | 34 |
| Remote/self/lab-free monitoring | [ | 25 |
| Disease assessment | [ | 17 |
| Disease diagnosis | [ | 10 |
| Methodology | [ | 5 |
Figure 2Distribution of the studies over the publication years (blue bars), and ratio of the number of studies using a smartphone or derivative recording system over fix and traditional systems (violet line).
Figure 3Number of studies vs. overall number of subjects.
Figure 4Overall number of subjects vs. publication year per study (blue dots) and associated linear regression (orange line). Note the logarithmic scale of the y-axis.
Figure 5Number of studies vs. number of test subjects.
Figure 6Distribution of the test subjects per health condition, as labeled by the authors, for the detection (left) and classification (right) studies.
Groups of features.
| Group and Description | Examples |
|---|---|
| MFCC [ | |
| ZCR [ | |
| Total Energy [ | |
| F0 [ | |
| Spectral Centroid [ | |
| Spectral Rolloff [ | |
| Power [ | |
| Power Ratio [ | |
| Duration [ | |
| Power Spectral Density [ | |
| Local Hu Moments [ | |
| Mel-Spectrogram [ | |
| Filtered Envelope [ | |
| Harmonic to Noise Ratio [ | |
| Spectral Variation [ | |
| Maximum Value [ | |
|
| Wavelet [ |
Figure 7Number of studies for each feature group.
Figure 8Number of studies for each category of classifiers.
Figure 9Time evolution of the ratios of the number of deep neural network studies in the “Neural Networks” category (blue) and of the number of random forest and ensemble learning studies in the “Decision Trees and related ensemble learning” category (orange).
Figure 10Specificity vs. sensitivity for the experiments of the cough classification studies. Each research group is associated with a specific color. The dashed line represents the specificity = sensitivity line and the dashed ellipse the 95% confidence ellipse.
Figure 11Cough detection. Left: percentage of experiments reporting each of the 8 most frequent measures. Right: histograms of the 3 most-frequent measures.
Figure 12Specificity (top) and FP per hour (bottom) vs. sensitivity for the cough detection. Colors, lines and ellipses are analogous to Figure 10.
Figure 13Number of reported citations for the most cited studies.
Overview of the selected cough detection studies (see text). GMM-HMM = Gaussian Mixture Model—Hidden Markov Model, TDNN = Time Delay Neural Network, SE = Sensitivity, SP = Specificity, PREC = Precision, FPh = False Positive per hour, ACC = Accuracy and F1 = F1 score.
| Study and System | # Test Subjects | Feature Groups (as in | Results | Description |
|---|---|---|---|---|
| [ | 13 (1309) | A − E − F − H − J − N + SVM | SE = 88–90, SP = 81–75 | Robust smartphone-based cough detection |
| [ | 10 (237) | A + Probabilistic Neural Network | SE = 80, SP = 96 | Cough detection over long periods of time for objective monitoring |
| [ | 18 | A + GMM-HMM | SE = 57.9, SP = 98.2, PREC = 80.9 | Objective cough monitoring for COPD patients |
| [ | 9 (2151/1338) | A + GMM-HMM | SE = 71–82, FPh = 13–7 | Continuous cough detection for ambulatory patients |
| [ | 26/9 | A + GMM-HMM | SE = 85.7–90.9, SP = 99.9–99.5, PREC = 94.7, FPh = 0.8–2.5 | Continuous cough detection over long periods of time for ambulatory patients |
| [ | 23/9 | A + GMM-HMM | SE = 86–91, SP = 99, FPh = 1–2.5 | Continuous cough detection over long periods of time for ambulatory patients |
| [ | 10/14 (656/1434) | A − B − D + TDNN | SE = 89.8–92.8, SP = 94.8-97.5, ACC = 93.9-97.4 | Cough detection for pediatric population |
| [ | 8 (3645) | SE = 78.1, SP = 99.6, ACC = 99, PREC = 84.6 | Cough detection over long periods of time for ambulatory COPD patients | |
| [ | 10 (1019) | I − M − P + Decision Tree | SE = 90.2, SP = 96.5, ACC = 93.1, PREC = 96.7, F1 = 93.3 | Cough characterization and detection |
| [ | 12 | SE = 96–90, SP = 94, PREC = 90–93, FPh = 1.2–1.2 | Objective cough monitoring for realistic ambulatory situations | |
| [ | 10 (50) | SE = 84, SP = 50, ACC = 67, PREC = 62.7, F1 = 71.8 | Separation of cough and throat clearing sounds | |
| [ | 15 (5489) | A − B − L + CNN | SE = 99.9, SP = 91.5, ACC = 99.8 | Overnight smartphone-based cough monitoring for asthma patients |