| Literature DB >> 35456379 |
Josef Blaszkiewicz1, Stephen A Duncan1.
Abstract
Serving as the metabolic hub of the human body, the liver is a vital organ that performs a variety of important physiological functions. Although known for its regenerative potential, it remains vulnerable to a variety of diseases. Despite decades of research, liver disease remains a leading cause of mortality in the United States with a multibillion-dollar-per-year economic burden. Prior research with model systems, such as primary hepatocytes and murine models, has provided many important discoveries. However, progress has been impaired by numerous obstacles associated with these models. In recent years, induced pluripotent stem cell (iPSC)-based systems have emerged as advantageous platforms for studying liver disease. Benefits, including preserved differentiation and physiological function, amenability to genetic manipulation via tools such as CRISPR/Cas9, and availability for high-throughput screening, make these systems increasingly attractive for both mechanistic studies of disease and the identification of novel therapeutics. Although limitations exist, recent studies have made progress in ameliorating these issues. In this review, we discuss recent advancements in iPSC-based models of liver disease, including improvements in model system construction as well as the use of high-throughput screens for genetic studies and drug discovery.Entities:
Keywords: drug discovery; high-throughput screening; induced pluripotent stem cells; liver diseases
Mesh:
Year: 2022 PMID: 35456379 PMCID: PMC9030659 DOI: 10.3390/genes13040573
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.141
Figure 1Abridged protocols for the differentiation of hepatocyte-like cells from iPSCs using (a) recombinant growth factors [13,16] or (b) small molecules [21].
Figure 2Methods of culturing iPSC-derived hepatocyte-like cells.
Liver Diseases Modeled by iPSC-based Systems.
| Disease | Configuration | Model Characteristics | Reference |
|---|---|---|---|
| Abetalipoproteinemia | 2D culture | Decreased ApoB secretion, intracellular lipid accumulation, increased cell death | [ |
| Alagille Syndrome | 3D organoids containing hepatocytes and cholangiocytes | Impaired bile duct formation and regenerative capacity | [ |
| 2D culture | Patient-derived, HLC phenotype uncharacterized | [ | |
| Alcohol-induced Liver Injury | 2D culture | Reduced proliferation, oxidative mitochondrial injury, increased steatosis, and hepatocellular carcinoma markers | [ |
| α-1 Antitrypsin Deficiency | 2D culture | AAT retention, enrichment of fibrosis- and cirrhosis-associated pathways | [ |
| Autosomal Recessive Hypercholesterolemia | 2D culture | Reduced LDL uptake | [ |
| Bile Salt Export Pump (BSEP) | 2D culture | Impaired biliary excretion, altered localization of BSEP protein | [ |
| Biliary Atresia | 2D culture | Decreased biliary marker expression, increased expression of fibrosis markers | [ |
| Citrullinemia Type I | 3D organoids | Accumulation of ammonia, decreased ureagenesis | [ |
| 2D culture | Decreased ureagenesis | [ | |
| Familial Hypercholesterolemia | 2D culture | Inability to uptake LDL | [ |
| Hemophilia B | 3D organoids | Production of inactive coagulation factor IX (F9) | [ |
| 2D culture | Reduced expression and activity of F9 | [ | |
| 2D culture | Aberrant splicing of F9 mRNA leading to reduced F9 expression | [ | |
| Hepatitis B | 3D organoids | Higher susceptibility to HBV infection than 2D culture, increased duration of infectious virus production | [ |
| 2D coculture of HLCs and liver non-parenchymal cells | Improved efficiency of infection relative to 2D monoculture due to epidermal growth factor (EGF) modulation of endocytosis | [ | |
| Hepatitis C | 2D culture | Permissive to infection with HCV, upregulation of type I and III interferons in response to infection | [ |
| 2D culture | Higher susceptibility to and propagation of HCV compared to Huh7 cells | [ | |
| 2D culture | Supportive of full HCV life cycle, increased expression of interferon-stimulated genes | [ | |
| Hepatitis E | 2D culture | Permissive host for hepatitis E virus natural isolates | [ |
| Malaria | 2D culture | Permissive host for infection with | [ |
| mtDNA Depletion Syndrome | 2D culture | Decreased mtDNA copy number, disruption of mitochondrial ultrastructure, reduced mitochondrial respiration/intracellular ATP, increased reactive oxygen species levels | [ |
| 2D culture and 3D organoids | Decreased mtDNA, reduced mitochondrial respiration, increased reactive oxygen species, increased sensitivity to iron overload | [ | |
| Nonalcoholic Fatty Liver Disease | 2D culture | Patient-specific lipid droplet formation upon administration of oleic acid, decreased lipid metabolism-associated gene expression in higher levels of steatosis | [ |
| 2D culture | Decreased electron transport chain activity, altered transcription of mitochondrial respiration pathways, increased pyruvate carboxylase activity, and fumarate accumulation in response to steatosis induction | [ | |
| 2D culture | Defects in V-ATPase assembly leading to increased ApoB secretion | [ | |
| 3D organoids with hepatocytes, macrophages, mesenchymal stem cells, and endothelial cells | Spontaneous lipid accumulation in absence of fatty acid supplementation | [ | |
| Niemann–Pick Disease Type C (NPC) | 2D culture | Increased lysosomal accumulation of cholesterol, increased trafficking of NPC1 to lysosomes | [ |
| 2D culture | Increased lysosomal cholesterol accumulation, increased cell size, upregulated autophagy and impaired autophagic flux | [ | |
| Ornithine Transcarbamylase Deficiency | 2D culture | Decreased urea secretion | [ |
| Pompe Disease | 2D culture | Accumulation of glycogen in lysosomes | [ |
| Primary Sclerosing Cholangitis | 3D organoids containing cholangiocytes | Altered organoid morphology, increased cellular senescence and inflammatory cytokine secretion | [ |
| Propionic Acidemia | 2D culture | Knockout of propionyl CoA carboxylase | [ |
| Transthyretin (TTR) Amyloidosis | 2D culture | Secretion of abnormal TTR, increased expression of transferrin and unfolded protein response signaling pathways | [ |
| Wilson Disease | 2D culture | Patient-derived, HLC phenotype uncharacterized | [ |
| 2D culture | Increased trafficking of ATP7B to the Golgi complex, increased rate of ATP7B degradation | [ | |
| Zellweger Spectrum Disorder | 2D culture | Defective peroxisome assembly | [ |
High-Throughput Drug Discovery and Development Assays Using iPSC-based Systems.
| Disease/Purpose | Assay Description | Results | Reference |
|---|---|---|---|
| α-1 Antitrypsin Deficiency | Screened over 3000 compounds from the Johns Hopkins Drug library using immunofluorescence to determine effect on AAT levels | Five hits confirmed to cause consistent reduction in AAT across multiple iPSC lines | [ |
| Liver Fibrosis | Screened over 1400 compounds using a red fluorescent protein reporter line to assay inhibition of stellate cell activation | Two compounds suitable for oral administration identified as potential treatments for liver fibrosis | [ |
| Familial | Screened over 2300 small molecules from the SPECTRUM collection drug library using an ELISA-based assay to detect ApoB secretion | Identified cardiac glycosides as potential treatment for lowering ApoB secretion | [ |
| mtDNA Depletion Syndrome | Screened over 2300 small molecules from the SPECTRUM collection drug library using a luciferase ATP assay to identify drugs that could restore ATP levels | Identified NAD as being able to improve ATP production and mitochondrial function | [ |
| Niemann–Pick Disease Type C | Used a series of 2-hydroxypropyl-cyclodextrins to determine impact on cholesterol accumulation and hepatic function | Identified HPGCD as potential treatment for NPC | [ |
| Non-alcoholic Fatty Liver Disease | Screened 13,000 compounds from AstraZeneca chemogenic library using BODIPY staining to quantify intracellular neutral lipid droplets | 21 confirmed hits identified CDK2-4-C/EBPα/DGAT2 pathway as therapeutic target for lowering lipid accumulation | [ |
| Identifying regulatory pathways for hepatic differentiation | Screened over 1100 small molecules using immunofluorescence to quantify HNF4α levels | Identification of HSP90β as a regulator of hepatic progenitor formation | [ |
| Toxicity Screening | Generated mCherry-tagged CYP1A1 HLCs and screened 241 chemicals to identify aryl hydrocarbon receptor modulators | Five novel hits determined to up- or down-regulate expression of CYP1A1 in HLCs | [ |
| Developed a 3D coculture model with macrophages and endothelial cells; screened 159 known toxic compounds for effects on hepatic function | Identified albumin expression assay as most-sensitive method for calculating TC50 values with this system | [ | |
| Screened 238 marketed drugs using liver organoids in a multiplexed readout assay | Validated high predictive values for effects on viability, cholestatic, and/or mitochondrial toxicity | [ | |
| Developed noncontact coculture model of liver spheroids and renal proximal tubule cells to assay liver and kidney toxicity simultaneously | Demonstrated toxicity profiles could be discriminated with known toxic CYP inhibitor compound CsA | [ | |
| Screened 47 compounds for effects on albumin, urea, and ATP levels using micropatterned coculture of HLCs and murine embryonic fibroblasts | Micropatterned coculture model showed similar sensitivity for toxic drug identification to primary hepatocyte model | [ |