Literature DB >> 35425660

A Multi-Factorial Assessment of Functional Human Autistic Spectrum Brain Network Analysis.

Oswaldo Artiles1, Fahad Saeed1.   

Abstract

The variability of the results obtained by the statistical analysis of functional human brain networks depend on multiple factors such as: the source of the fMRI data, the brain parcellations, the graph theory measures, and the threshold values applied to the functional connectivity matrices to obtain adjacency matrices of sparse graphs. Therefore, the brain network used for down-stream analysis is heavily dependent on the methods that are applied to the fMRI data to obtain and analyze such networks. In this paper we present the preliminary results of a multi-factorial assessment of the statistical analysis of functional human brain networks. The assessment was performed in the functional human brain networks obtained from the resting state fMRI data of ten imaging sites provided by the Autism Brain Imaging Data Exchange (ABIDE) preprocessed functional magnetic resonance database, with six different functional brain parcellations, six different graph theory measures, and three different threshold values applied to the corresponding connectivity matrices to obtain sparse graphs. The statistical analysis to detect differences between the networks representing autism and control subjects were performed with four different statistical methods, using the p-values to determine the levels of significance of the analysis. Our main results show a strong dependence of functional human brain networks statistical analysis on the brain parcellations, and on the graph theory measures. Our results further show that the results of these analysis are less dependent on the statistical tests methods and on the threshold values of the sparse graphs for all practical purposes. An additional result is that the levels of significance of the statistical tests obtained for data provided by individual sites were much higher than the global levels of significance obtained by averaging the results of all the sites, implying that the best results on the analysis of functional human brain networks are obtained when the source of the fMRI data is the same for all the data. Since reproducibility and reliability of functional brain network statistical analysis is strongly dependent on the graphs obtained from fMRI data; our expectation is that the novel results presented in this paper would further help researchers in this field to develop methods that are reliable and reproducible.

Entities:  

Keywords:  autism; fMRI; functional brain network; graph theory; statistical analysis

Year:  2021        PMID: 35425660      PMCID: PMC9007171          DOI: 10.1109/bibm52615.2021.9669679

Source DB:  PubMed          Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)        ISSN: 2156-1125


  19 in total

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Journal:  Neuroimage       Date:  2012-01-10       Impact factor: 6.556

Review 2.  Brain graphs: graphical models of the human brain connectome.

Authors:  Edward T Bullmore; Danielle S Bassett
Journal:  Annu Rev Clin Psychol       Date:  2011       Impact factor: 18.561

3.  The minimum spanning tree: an unbiased method for brain network analysis.

Authors:  P Tewarie; E van Dellen; A Hillebrand; C J Stam
Journal:  Neuroimage       Date:  2014-10-16       Impact factor: 6.556

Review 4.  Imaging-based parcellations of the human brain.

Authors:  Simon B Eickhoff; B T Thomas Yeo; Sarah Genon
Journal:  Nat Rev Neurosci       Date:  2018-11       Impact factor: 34.870

5.  There is no single functional atlas even for a single individual: Functional parcel definitions change with task.

Authors:  Mehraveh Salehi; Abigail S Greene; Amin Karbasi; Xilin Shen; Dustin Scheinost; R Todd Constable
Journal:  Neuroimage       Date:  2019-11-15       Impact factor: 6.556

6.  A whole brain fMRI atlas generated via spatially constrained spectral clustering.

Authors:  R Cameron Craddock; G Andrew James; Paul E Holtzheimer; Xiaoping P Hu; Helen S Mayberg
Journal:  Hum Brain Mapp       Date:  2011-07-18       Impact factor: 5.038

Review 7.  Complex brain networks: graph theoretical analysis of structural and functional systems.

Authors:  Ed Bullmore; Olaf Sporns
Journal:  Nat Rev Neurosci       Date:  2009-02-04       Impact factor: 34.870

Review 8.  A review of structural and functional brain networks: small world and atlas.

Authors:  Zhijun Yao; Bin Hu; Yuanwei Xie; Philip Moore; Jiaxiang Zheng
Journal:  Brain Inform       Date:  2015-02-14

Review 9.  Machine Learning Methods for Diagnosing Autism Spectrum Disorder and Attention- Deficit/Hyperactivity Disorder Using Functional and Structural MRI: A Survey.

Authors:  Taban Eslami; Fahad Almuqhim; Joseph S Raiker; Fahad Saeed
Journal:  Front Neuroinform       Date:  2021-01-20       Impact factor: 4.081

10.  Application of Graph Theory to Assess Static and Dynamic Brain Connectivity: Approaches for Building Brain Graphs.

Authors:  Qingbao Yu; Yuhui Du; Jiayu Chen; Jing Sui; Tulay Adali; Godfrey Pearlson; Vince D Calhoun
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2018-04-25       Impact factor: 10.961

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