Literature DB >> 35396991

Comparing medical history data derived from electronic health records and survey answers in the All of Us Research Program.

Lina Sulieman1, Robert M Cronin1,2, Robert J Carroll1, Karthik Natarajan3, Kayla Marginean4, Brandy Mapes4, Dan Roden1,5, Paul Harris1,4, Andrea Ramirez5,6.   

Abstract

OBJECTIVE: A participant's medical history is important in clinical research and can be captured from electronic health records (EHRs) and self-reported surveys. Both can be incomplete, EHR due to documentation gaps or lack of interoperability and surveys due to recall bias or limited health literacy. This analysis compares medical history collected in the All of Us Research Program through both surveys and EHRs.
MATERIALS AND METHODS: The All of Us medical history survey includes self-report questionnaire that asks about diagnoses to over 150 medical conditions organized into 12 disease categories. In each category, we identified the 3 most and least frequent self-reported diagnoses and retrieved their analogues from EHRs. We calculated agreement scores and extracted participant demographic characteristics for each comparison set.
RESULTS: The 4th All of Us dataset release includes data from 314 994 participants; 28.3% of whom completed medical history surveys, and 65.5% of whom had EHR data. Hearing and vision category within the survey had the highest number of responses, but the second lowest positive agreement with the EHR (0.21). The Infectious disease category had the lowest positive agreement (0.12). Cancer conditions had the highest positive agreement (0.45) between the 2 data sources. DISCUSSION AND
CONCLUSION: Our study quantified the agreement of medical history between 2 sources-EHRs and self-reported surveys. Conditions that are usually undocumented in EHRs had low agreement scores, demonstrating that survey data can supplement EHR data. Disagreement between EHR and survey can help identify possible missing records and guide researchers to adjust for biases.
© The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  zzm321990 All of Uszzm321990 ; electronic health records; medical history; phenotype; survey

Mesh:

Year:  2022        PMID: 35396991      PMCID: PMC9196700          DOI: 10.1093/jamia/ocac046

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   7.942


  32 in total

1.  Development of the Initial Surveys for the All of Us Research Program.

Authors:  Robert M Cronin; Rebecca N Jerome; Brandy Mapes; Regina Andrade; Rebecca Johnston; Jennifer Ayala; David Schlundt; Kemberlee Bonnet; Sunil Kripalani; Kathryn Goggins; Kenneth A Wallston; Mick P Couper; Michael R Elliott; Paul Harris; Mark Begale; Fatima Munoz; Maria Lopez-Class; David Cella; David Condon; Mona AuYoung; Kathleen M Mazor; Steve Mikita; Michael Manganiello; Nicholas Borselli; Stephanie Fowler; Joni L Rutter; Joshua C Denny; Elizabeth W Karlson; Brian K Ahmedani; Christopher J O'Donnell
Journal:  Epidemiology       Date:  2019-07       Impact factor: 4.822

2.  Accuracy and Completeness of Clinical Coding Using ICD-10 for Ambulatory Visits.

Authors:  Jan Horsky; Elizabeth A Drucker; Harley Z Ramelson
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

3.  Concordance of cancer registry and self-reported race, ethnicity, and cancer type: a report from the American Cancer Society's studies of cancer survivors.

Authors:  Tracy M Layne; Leah M Ferrucci; Beth A Jones; Tenbroeck Smith; Lou Gonsalves; Brenda Cartmel
Journal:  Cancer Causes Control       Date:  2018-11-03       Impact factor: 2.506

4.  Computing disease incidence, prevalence and comorbidity from electronic medical records.

Authors:  Steven C Bagley; Russ B Altman
Journal:  J Biomed Inform       Date:  2016-08-04       Impact factor: 6.317

5.  PheProb: probabilistic phenotyping using diagnosis codes to improve power for genetic association studies.

Authors:  Jennifer A Sinnott; Fiona Cai; Sheng Yu; Boris P Hejblum; Chuan Hong; Isaac S Kohane; Katherine P Liao
Journal:  J Am Med Inform Assoc       Date:  2018-10-01       Impact factor: 4.497

6.  Identification of Patients with Family History of Pancreatic Cancer--Investigation of an NLP System Portability.

Authors:  Saeed Mehrabi; Anand Krishnan; Alexandra M Roch; Heidi Schmidt; DingCheng Li; Joe Kesterson; Chris Beesley; Paul Dexter; Max Schmidt; Mathew Palakal; Hongfang Liu
Journal:  Stud Health Technol Inform       Date:  2015

7.  Agreement between questionnaires and registry data on routes to diagnosis and milestone dates of the cancer diagnostic pathway.

Authors:  Alina Zalounina Falborg; Peter Vedsted; Usha Menon; David Weller; Richard D Neal; Irene Reguilon; Samantha Harrison; Henry Jensen
Journal:  Cancer Epidemiol       Date:  2020-02-27       Impact factor: 2.984

8.  Interrater reliability: the kappa statistic.

Authors:  Mary L McHugh
Journal:  Biochem Med (Zagreb)       Date:  2012       Impact factor: 2.313

9.  Phenome-wide association studies demonstrating pleiotropy of genetic variants within FTO with and without adjustment for body mass index.

Authors:  Robert M Cronin; Julie R Field; Yuki Bradford; Christian M Shaffer; Robert J Carroll; Jonathan D Mosley; Lisa Bastarache; Todd L Edwards; Scott J Hebbring; Simon Lin; Lucia A Hindorff; Paul K Crane; Sarah A Pendergrass; Marylyn D Ritchie; Dana C Crawford; Jyotishman Pathak; Suzette J Bielinski; David S Carrell; David R Crosslin; David H Ledbetter; David J Carey; Gerard Tromp; Marc S Williams; Eric B Larson; Gail P Jarvik; Peggy L Peissig; Murray H Brilliant; Catherine A McCarty; Christopher G Chute; Iftikhar J Kullo; Erwin Bottinger; Rex Chisholm; Maureen E Smith; Dan M Roden; Joshua C Denny
Journal:  Front Genet       Date:  2014-08-05       Impact factor: 4.599

10.  Linking Data From Health Surveys and Electronic Health Records: A Demonstration Project in Two Chicago Health Center Clinics.

Authors:  Fikirte Wagaw; Catherine A Okoro; Sunkyung Kim; Jessica Park; Fred Rachman
Journal:  Prev Chronic Dis       Date:  2018-01-18       Impact factor: 2.830

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