| Literature DB >> 35379900 |
Chen-Xi Ye1, Xiang Shen1, Shuming Chen2, Eric Meggers3.
Abstract
α-Amino acids are essential for life as building blocks of proteins and components of diverse natural molecules. In both industry and academia, the incorporation of unnatural amino acids is often desirable for modulating chemical, physical and pharmaceutical properties. Here we report a protocol for the economical and practical synthesis of optically active α-amino acids based on an unprecedented stereocontrolled 1,3-nitrogen shift. Our method employs abundant and easily accessible carboxylic acids as starting materials, which are first connected to a nitrogenation reagent, followed by a highly regio- and enantioselective ruthenium- or iron-catalysed C(sp3)-H amination. This straightforward method displays a very broad scope, providing rapid access to optically active α-amino acids with aryl, allyl, propargyl and alkyl side chains, and also permits stereocontrolled late-stage amination of carboxylic-acid-containing drugs and natural products.Entities:
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Year: 2022 PMID: 35379900 PMCID: PMC7612692 DOI: 10.1038/s41557-022-00895-3
Source DB: PubMed Journal: Nat Chem ISSN: 1755-4330 Impact factor: 24.274
Fig. 1Stereocontrolled nitrene C(sp3)−H insertions for the synthesis of α-amino acids.
a, Strategy for the straightforward synthesis of α-amino acids by nitrene C−H insertion. b, Intramolecular nitrene C−H insertion goes via a cyclic transition state to form a cyclic product, while intermolecular nitrene C−H insertion forms acyclic products. c, Proposed 1,3-nitrogen migration which combines the advantages of intramolecular (high regio- and stereocontrol via cyclic TS) and intermolecular (acyclic product formation) C−H insertion chemistry. TS = transition state, PG = protecting group.
Initial experiments and optimization of enantioselective 1,3-nitrogen shift
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| Entry | Catalyst | Protecting group (PG) | Conditions[ | Conversion (%)[ | Yield of 2(%)[ | Yield of PAA (%)[ | e.e. of 2(%)[ |
| 1 | Λ- | COCF3 (a) | Standard | 0 | - | - | - |
| 2 | Λ- | Ts(b) | Standard | 37 | <5 | 23 | n.d. |
| 3 | Λ- | Ms (c) | Standard | 50 | <5 | 25 | n.d. |
| 4 | Λ- | CO2Me (d) | Standard | 100 | 86 | 12 | 89 |
| 5 | Λ- | Troc (e) | Standard | 100 | 93 (91)[ | 4 | 95 |
| 6 | Λ- | Troc (e) | Standard | 98 | 80 | 9 | 92 |
| 7 | Λ- | Troc (e) | Standard | 19 | 6 | 5 | 90 |
| 8 | Λ- | Troc (e) | Standard | 100 | 85 | 9 | 92 |
| 9 | Λ- | Troc (e) | Et3N as base | 100 | 25 | 73 | 95 |
| 10 | Λ- | Troc (e) | Na2CO3 as base | 99 | 87 | 5 | 95 |
| 11 | Λ- | Troc (e) | THF as solvent | 94 | 15 | 75 | 82 |
| 12 | Λ- | Troc (e) | MeOH as solvent | 96 | 0 | 64 | - |
Shown are the deviations from the standard reaction conditions. Standard conditions: substrate 1 (0.1 mmol), Ru catalyst (1 mol%) and the indicated base (3 equiv.) in the indicated solvent (2 mL, c 0.05 M) were stirred at room temperature (25 °C) for 16 hours.
Conversion and yield were determined by 1H NMR analysis using hexamethylbenzene as an internal standard.
Enantiomeric excess (e.e.) values were determined by HPLC on chiral stationary phases.
Yield of the isolated α-amino acid. n.d. = not determined. Troc = CO2CH2CCl3.
Substrate scope for ruthenium catalysis
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| α-Aryl amino acids | ||||
| α-Alkenyl, α-alkynyl & α-alkyl amino acids | ||||
| α-Disubstituted amino acids (stereoretentive 1,3-nitrogen shift) | ||||
Conditions for enantioselective 1,3-nitrogen shift: reactions were carried out with Λ-RuDMP (1-2 mol%), K2CO3 (3 equiv.) and CH2Cl2 (c 0.05 M) at room temperature (25 °C) for 16 h. Enantiomeric excess (e.e.) values were determined by HPLC analysis (see Supplementary Information section 4 for full details).
Isolated after conversion to the methyl ester.
Additional gram-scale reaction performed with 3.5 mmol (1.32 gram) azanyl ester gave 23 in 91% yield with 95% e.e. (see Supplementary Information section 6 for full details).
KHCO3 instead of K2CO3 as a base.
Λ-RuH (2-10 mol%) as the catalyst.
The reaction performed with racemic azanyl ester 37 afforded (R)-38 in 71% yield with 48% e.e.
Reaction performed with enantiopure (S)-azanyl ester.
Reaction performed with enantiopure (R)(S)-38-azanyl ester.
Substrate scope for iron catalysis
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Reaction conditions: reactions were carried out with (R,R)-FeBIP (8-15 mol%), K2CO3 (3 equiv.) and 1,1,2,2-tetrachloroethane (TCE, c 0.1 M) at 0 °C for 40 h. Enantiomeric excess (e.e.) values were determined by HPLC analysis (see Supplementary Information section 4 for full details).
Reaction performed at room temperature (25 °C) for 16 h.
Isolated after conversion to the methyl ester.
Fig. 2Investigation of the reaction mechanism.
a, Calculated free-energy profile for the 1,3-nitrogen migration of model substrate 1d with RuH as the catalyst (energies provided in kcal/mol). Ruthenium catalyzes the cleavage of the N−O bond of 1d via transition state TS-I leading to the carboxylate coordinated ruthenium nitrene intermediate IV. This is followed by singlet-triplet spin crossover to the triplet state of IV followed by an exergonic hydrogen atom transfer via cyclic transition state TS-II to generate diradical intermediate V in its triplet state. Next, C−N bond formation occurs upon spin crossover to the singlet state through a minimum energy crossing point (MECP) to generate the chelate complex VI. Protonation of the coordinated carboxylate moiety finally releases the product 2d. b, Geometries and non-covalent interaction plots of calculated transition states for the hydrogen atom transfer step to provide insight into the origin of stereodiscrimination (interatomic distances provided in ångströms). The results reveal that in , a favorable π−π stacking interaction exists between the ligand framework of the catalyst and the phenyl substituent of the substrate 1d (TS-II with Ph substituent). This favorable π−π stacking interaction is absent from . The calculations also confirm that stereodiscrimination can be achieved with a substrate bearing a Bu instead of a Ph side chain (TS-II with Bu substituent). c, Distortion-interaction analysis performed on TS-II-major-Ph and TS- II-minor-Ph. The more favorable interaction energy in TS-II-major-Ph further supports the contribution of stabilizing interactions such as π−π stacking to the stereoselectivity in the formation of phenyl glycine derivative 2d.
Fig. 3Summary of proposed simplified mechanism.
The catalytic cycle of the asymmetric 1,3-nitrogen migration commences with N−O cleavage of azanyl ester in presence of metal catalyst, proceeds through stereocontrolled hydrogen atom transfer and subsequent rebound of the diradical, and concludes with release of the α-amino acid and catalyst regeneration.