Literature DB >> 35364105

RNA at the surface of phase-separated condensates impacts their size and number.

Audrey Cochard1, Marina Garcia-Jove Navarro2, Leonard Piroska2, Shunnichi Kashida2, Michel Kress3, Dominique Weil4, Zoher Gueroui5.   

Abstract

Although it is now recognized that specific RNAs and protein families are critical for the biogenesis of ribonucleoprotein (RNP) condensates, how these molecular constituents determine condensate size and morphology is unknown. To circumvent the biochemical complexity of endogenous RNP condensates, the use of programmable tools to reconstitute condensate formation with minimal constituents can be instrumental. Here we report a methodology to form RNA-containing condensates in living cells programmed to specifically recruit a single RNA species. Our bioengineered condensates are made of ArtiGranule scaffolds composed of an orthogonal protein that can bind to a specific heterologously expressed RNA. These scaffolds undergo liquid-liquid phase separation in cells and can be chemically controlled to prevent condensation or to trigger condensate dissolution. We found that the targeted RNAs localize at the condensate surface, either as isolated RNA molecules or as a homogenous corona of RNA molecules around the condensate. The recruitment of RNA changes the material properties of condensates by hardening the condensate body. Moreover, the condensate size scales with RNA surface density; the higher the RNA density is, the smaller and more frequent the condensates are. These results suggest a mechanism based on physical constraints, provided by RNAs at the condensate surface, that limit condensate growth and coalescence.
Copyright © 2022 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2022        PMID: 35364105      PMCID: PMC9117936          DOI: 10.1016/j.bpj.2022.03.032

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   3.699


  92 in total

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2.  Designer membraneless organelles enable codon reassignment of selected mRNAs in eukaryotes.

Authors:  Christopher D Reinkemeier; Gemma Estrada Girona; Edward A Lemke
Journal:  Science       Date:  2019-03-29       Impact factor: 47.728

3.  Formation of Multiphase Complex Coacervates and Partitioning of Biomolecules within them.

Authors:  Gregory A Mountain; Christine D Keating
Journal:  Biomacromolecules       Date:  2019-11-27       Impact factor: 6.988

4.  Surface Electrostatics Govern the Emulsion Stability of Biomolecular Condensates.

Authors:  Timothy J Welsh; Georg Krainer; Jorge R Espinosa; Jerelle A Joseph; Akshay Sridhar; Marcus Jahnel; William E Arter; Kadi L Saar; Simon Alberti; Rosana Collepardo-Guevara; Tuomas P J Knowles
Journal:  Nano Lett       Date:  2022-01-10       Impact factor: 11.189

5.  Phase transitions in the assembly of multivalent signalling proteins.

Authors:  Pilong Li; Sudeep Banjade; Hui-Chun Cheng; Soyeon Kim; Baoyu Chen; Liang Guo; Marc Llaguno; Javoris V Hollingsworth; David S King; Salman F Banani; Paul S Russo; Qiu-Xing Jiang; B Tracy Nixon; Michael K Rosen
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

6.  RNA-Induced Conformational Switching and Clustering of G3BP Drive Stress Granule Assembly by Condensation.

Authors:  Jordina Guillén-Boixet; Andrii Kopach; Alex S Holehouse; Sina Wittmann; Marcus Jahnel; Raimund Schlüßler; Kyoohyun Kim; Irmela R E A Trussina; Jie Wang; Daniel Mateju; Ina Poser; Shovamayee Maharana; Martine Ruer-Gruß; Doris Richter; Xiaojie Zhang; Young-Tae Chang; Jochen Guck; Alf Honigmann; Julia Mahamid; Anthony A Hyman; Rohit V Pappu; Simon Alberti; Titus M Franzmann
Journal:  Cell       Date:  2020-04-16       Impact factor: 41.582

7.  Membrane surfaces regulate assembly of ribonucleoprotein condensates.

Authors:  Wilton T Snead; Ameya P Jalihal; Therese M Gerbich; Ian Seim; Zhongxiu Hu; Amy S Gladfelter
Journal:  Nat Cell Biol       Date:  2022-04-11       Impact factor: 28.213

8.  RNA phase transitions in repeat expansion disorders.

Authors:  Ankur Jain; Ronald D Vale
Journal:  Nature       Date:  2017-05-31       Impact factor: 49.962

9.  Recruitment of mRNAs to P granules by condensation with intrinsically-disordered proteins.

Authors:  Chih-Yung S Lee; Andrea Putnam; Tu Lu; ShuaiXin He; John Paul T Ouyang; Geraldine Seydoux
Journal:  Elife       Date:  2020-01-24       Impact factor: 8.140

10.  Size conservation emerges spontaneously in biomolecular condensates formed by scaffolds and surfactant clients.

Authors:  Ignacio Sanchez-Burgos; Jerelle A Joseph; Rosana Collepardo-Guevara; Jorge R Espinosa
Journal:  Sci Rep       Date:  2021-07-27       Impact factor: 4.379

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  1 in total

1.  Mesoscale structure-function relationships in mitochondrial transcriptional condensates.

Authors:  Marina Feric; Azadeh Sarfallah; Furqan Dar; Dmitry Temiakov; Rohit V Pappu; Tom Misteli
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-03       Impact factor: 12.779

  1 in total

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