| Literature DB >> 35361781 |
Diego Angeles-Valdez1, Jalil Rasgado-Toledo1, Victor Issa-Garcia1,2, Thania Balducci3,4, Viviana Villicaña5, Alely Valencia6, Jorge Julio Gonzalez-Olvera7, Ernesto Reyes-Zamorano8, Eduardo A Garza-Villarreal9.
Abstract
Cocaine use disorder (CUD) is a substance use disorder (SUD) characterized by compulsion to seek, use and abuse of cocaine, with severe health and economic consequences for the patients, their families and society. Due to the lack of successful treatments and high relapse rate, more research is needed to understand this and other SUD. Here, we present the SUDMEX CONN dataset, a Mexican open dataset of 74 CUD patients (9 female) and matched 64 healthy controls (6 female) that includes demographic, cognitive, clinical, and magnetic resonance imaging (MRI) data. MRI data includes: 1) structural (T1-weighted), 2) multishell high-angular resolution diffusion-weighted (DWI-HARDI) and 3) functional (resting state fMRI) sequences. The repository contains unprocessed MRI data available in brain imaging data structure (BIDS) format with corresponding metadata available at the OpenNeuro data sharing platform. Researchers can pursue brain variability between these groups or use a single group for a larger population sample.Entities:
Mesh:
Year: 2022 PMID: 35361781 PMCID: PMC8971535 DOI: 10.1038/s41597-022-01251-3
Source DB: PubMed Journal: Sci Data ISSN: 2052-4463 Impact factor: 6.444
Demographic characteristics of dataset.
| HC (n = 64) | CUD (n = 74) | Statistic | |
|---|---|---|---|
| 30.6 ± 8.26 | 31 ± 7.20 | ||
| Male | 51 (79.68%) | 66 (89.18%) | χ²(1) = 0.49 |
| Female | 11 (20.31%) | 9 (10.81%) | |
| 133.44 ± 50.6 | 107.29 ± 50.6 | ||
| Elementary | 3 (4.68%) | 6 (8.10%) | χ²(5) = 14.05 |
| Middle school | 14 (21.87%) | 32 (43.24%) | |
| High school | 16 (25%) | 10 (13.51%) | |
| Technical | 5 (7.81%) | 12 (16.21%) | |
| Bachelor degree | 21 (32.81%) | 13 (17.56%) | |
| Doctorate degree | 1 (1.56%) | 0 (0%) | |
| Years consumption | n.a | 10.7 ± 6.8 | n.a |
| Cocaine age onset | n.a | 20.91 ± 5.59 | n.a |
| Positive by | n.a | 24 (32.43%) | n.a |
| Years consumption | 6.11 ± 7.14 | 13.64 ± 8.10 | |
| Cigarette per day | 0.57 ± 0.85 | 1.44 ± 1.13 | |
| Years consumption | n.a | 14.86 ± 9.96 | n.a |
| Years consumption | n.a | 4.01 ± 4.31 | n.a |
Data are given as N(%) or mean (SD), Two samples t-test was performed for age, and χ² for categorical variables, n.a: no applica. HC, healthy control; CUD, cocaine use disorder.
Summary of the acquired data for clinical measures, cognitive measures and MRI sequences.
| Acquisitions | ||
|---|---|---|
| Clinical measures | Cognitive measures | MRI sequences |
| • Instant-view urine test | • Berg’s Card Sorting Test | • Whole-brain resting state eyes open (10 min) |
| • MINI plus | • Flanker task | |
| • ASI | • Go/No-go task | • High Angular Resolution |
| • SCID II | • Letter number sequencing | • Diffusion Imaging (DWI) |
| • SCL90 Revised | • Digit span backward | |
| • CCQ general & CCQ now | • Iowa gambling task | |
| • WHODAS 2.0 | • Tower of london | |
| • BIS11 | • Reading mind in the eyes | |
| • EHI short | ||
| • DERS | ||
| • CGI | ||
| • DIB Revised | ||
| • DES | ||
| • DSS 4.0 | ||
Fig. 1Anatomical MRI metrics for each group. Mean cortical thickness of (a) Healthy Control (HC), and (b) Cocaine Use Disorder (CUD) group. (c) Cortical Thickness (mm) and Volume (cm3) extracted for each group.
Fig. 2Quality metrics for anatomical and functional images. Anatomical images: (a) Signal-to-Noise Ratio (SNR), (b) contrast-to-noise ratio, (c) entropy-focus criterion. Functional images: (d) mean framewise displacement, (E) temporal Signal-to-Noise Ratio, and (f) spatial standard deviation of successive difference images, for healthy control (HC) and cocaine use disorder (CUD). Dashed line represents the mean of each group.
Fig. 3Quality metrics for diffusion images. Signal-to-Noise Ratio values (SNR) for Diffusion-weighted images computed in corpus callosum for (a) B0, (b) Worst-case SNR value and (c) Best-case, for healthy control (HC) and cocaine use disorder (CUD). Dashed line represents the mean of each group.
| Measurement(s) | functional brain measurement • Diffusion Weighted Imaging • Abnormality of brain morphology • Alteration Of Cognitive Function • Clinical Study |
| Technology Type(s) | Functional Magnetic Resonance Imaging • Diffusion Weighted Imaging • Turbo Field Echo MRI • neuropsychological test • Clinical Evaluation |
| Factor Type(s) | Cocaine Dependence |
| Sample Characteristic - Organism | Homo |
| Sample Characteristic - Location | Mexico City |