| Literature DB >> 35338722 |
Seyyed Ali Hosseini1,2, Isaac Shiri3, Ghasem Hajianfar4, Bahador Bahadorzadeh5, Pardis Ghafarian6,7, Habib Zaidi3,8,9,10, Mohammad Reza Ay1,2.
Abstract
OBJECTIVES: This study is aimed at examining the synergistic impact of motion and acquisition/reconstruction parameters on 18 F-FDG PET image radiomic features in non-small cell lung cancer (NSCLC) patients, and investigating the robustness of features performance in differentiating NSCLC histopathology subtypes.Entities:
Keywords: PET/CT; non-small cell lung cancer; quantitative analysis; radiomics; robustness
Mesh:
Substances:
Year: 2022 PMID: 35338722 PMCID: PMC9322423 DOI: 10.1002/mp.15615
Source DB: PubMed Journal: Med Phys ISSN: 0094-2405 Impact factor: 4.506
FIGURE 1Framework adopted in the current study, beginning with inducing motion, and followed by image processing and reconstruction steps and culminating with data analysis
FIGURE 2Illustration of the thoracic phantom and respiratory motion platform
Patients’ clinical and pathological characteristics of the current study
| Characteristics | |
|---|---|
| Gender | |
| Male | 22 |
| Female | 18 |
| Height (Cm) (mean ± SD) | 167 ± 14 |
| Weight (Kg) (mean ± SD) | 66 ± 12 |
| Cancer stage | |
| I | 6 |
| II | 8 |
| III | 12 |
| IV | 14 |
| Histology | |
| Adenocarcinoma | 20 |
| Squamous cell | 20 |
Image reconstruction settings for the phantom study
| Parameter | Variation |
|---|---|
| Reconstruction algorithm |
OSEM (HD) OSEM + PSF (HDS) OSEM + PSF + TOF (TS) |
| Subsets | 18, 21 |
| Iterations | 2, 3 |
| Post‐reconstruction filter | 0, 4.5, 5.5, 6.4, 7.5 (mm) |
| Lesion sizes | 8, 10, 13, 17, 22 (mm) |
TOF + OSEM (TOF is commercially referred to as VUE.FX), OSEM (commercially referred to as VUE.HD), and PSF + OSEM + TOF (PSF + TOF, referred to as Sharp‐IR by the manufacturer) algorithms.
Abbreviations: TOF, time‐of‐flight; PSF, Point Spread Function; OSEM, Ordered Subset Expectation Maximization.
FIGURE 3Illustration of 3D region‐growing‐based segmentation of phantom spheres (left) and patient (middle and right) malignant lesions using the Slicer 4.8.0 software
FIGURE 4(a) The visual impact of different reconstruction algorithms and various subset and iteration numbers, different FWHM filter sizes, and activity after a half‐life of 18F‐FDG, post‐injection (PI) on the phantom images. (b) Display of 2D and 3D representations of how motion affects lesion delineation before (red contour) and after (blue contour) inducing motion for different lesion sizes
Summary of parameters affecting the number of robust and non‐robust radiomic features (from a total of 174 radiomics features)
| Parameter | Size (mm) | COV ≤ 5% | 5% < COV ≤ 10% | 10% < COV ≤ 20% | COV > 20% |
|---|---|---|---|---|---|
| Motion | 8 | 40 | 25 | 32 | 77 |
| 10 | 43 | 24 | 47 | 60 | |
| 13 | 48 | 25 | 35 | 66 | |
| 17 | 53 | 33 | 30 | 58 | |
| R22 | 60 | 37 | 29 | 48 | |
| L22 | 64 | 40 | 34 | 36 | |
| Reconstruction | 8 | 33 | 19 | 47 | 75 |
| 10 | 36 | 30 | 48 | 60 | |
| 13 | 77 | 50 | 34 | 13 | |
| 17 | 97 | 44 | 27 | 5 | |
| R22 | 112 | 37 | 18 | 7 | |
| L22 | 116 | 34 | 19 | 4 | |
| FWHM filter size | 8 | 31 | 15 | 41 | 87 |
| 10 | 39 | 33 | 37 | 65 | |
| 13 | 45 | 37 | 52 | 40 | |
| 17 | 55 | 56 | 35 | 28 | |
| R22 | 73 | 50 | 35 | 16 | |
| L22 | 80 | 56 | 35 | 28 | |
| Reconstruction + Motion | 8 | 26 | 42 | 40 | 66 |
| 10 | 31 | 37 | 40 | 66 | |
| 13 | 57 | 38 | 52 | 27 | |
| 17 | 62 | 47 | 48 | 17 | |
| R22 | 75 | 40 | 35 | 24 | |
| L22 | 83 | 42 | 34 | 15 | |
| FWHM filter size + Motion | 8 | 27 | 43 | 27 | 77 |
| 10 | 31 | 29 | 54 | 60 | |
| 13 | 33 | 33 | 55 | 53 | |
| 17 | 48 | 25 | 68 | 33 | |
| R22 | 69 | 39 | 45 | 21 | |
| L22 | 73 | 55 | 34 | 12 |
FIGURE 6Heat map of the variation of 174 radiomic features in the different scenarios
FIGURE 7Variation of the number of features based on the COV over the different scenarios
FIGURE 5Impact of test–retest with motion for the large sphere size from 174 IBSI radiomic features. The X‐axis refers to the number of features whereas the Y‐axis refers to the number of categories (1 to 4) since the differences were classified into four categories, including 1 = extremely low (COV ≤ 5%), 2 = low (5% < COV ≤ 10%), 3 = mediocre (10% < COV ≤ 20%), and 4 = high (COV > 20%)
Robust features against various conditions and features with the lowest reproducibility
| # | Family | Biomarker |
|---|---|---|
| Robust features against various conditions | Morph | Compactness 1, Spherical disproportion, Sphericity, Volume density (AEE), Volume density (MVEE), Volume density (convex hull), Area density (convex hull) |
| IH | Minimum, Maximum, Range | |
| IVH | Volume fraction at 10% intensity, Volume fraction diff between 10% and 90% intensity | |
| GLCM | Inverse difference normalized, Inverse difference moment normalized, | |
| GLRLM | Short runs emphasis, Run length non‐uniformity normalized, Run percentage, Long runs emphasis | |
| NGLDM | Dependence count percentage, Dependence count entropy | |
| Features with lowest reproducibility of PET images | Morph | Centre of mass shift |
| Stat | Variance, (Excess) kurtosis | |
| IH | Kurtosis, 10th percentile, Mode, Maximum gradient gray level, Minimum histogram gradient | |
| IVH | Volume fraction at 90% intensity | |
| GLCM | Cluster tendency, Cluster shade, Cluster prominence | |
| GLSZM | Large zone low gray level emphasis, Zone size variance | |
| GLDSZM | Large distance low gray level emphasis | |
| NGLDM | High dependence low gray level emphasis, Dependence count variance |
PET/CT images radiomic features categorized based on p‐values (p‐value <0.05)
| Features | AUC |
|
| COV of motion |
|---|---|---|---|---|
| ih_var | 0.792 | 0.001 | 0.189 | 10.37 |
| ih_mad | 0.765 | 0.003 | 0.189 | 5.54 |
| ngl_ldlge_3D | 0.755 | 0.005 | 0.189 | 37.31 |
| ngt_complexity_3D | 0.75 | 0.006 | 0.189 | 21.56 |
| szm_szlge_3D | 0.732 | 0.011 | 0.189 | 34.54 |
| ivh_v10 | 0.73 | 0.012 | 0.189 | 5.44 |
| ih_p10 | 0.726 | 0.014 | 0.189 | 14.28 |
| dzm_sdlge_3D | 0.725 | 0.014 | 0.189 | 33.85 |
| ih_cov | 0.722 | 0.015 | 0.189 | 7.13 |
| cm_joint_var_3D_comb | 0.72 | 0.016 | 0.189 | 19.71 |
| cm_joint_entr_3D_comb | 0.712 | 0.021 | 0.189 | 1.94 |
| szm_hgze_3D | 0.71 | 0.022 | 0.189 | 5.49 |
| dzm_hgze_3D | 0.71 | 0.022 | 0.189 | 5.49 |
| ih_medad | 0.707 | 0.024 | 0.189 | 4.62 |
| ivh_diff_v10_v90 | 0.705 | 0.026 | 0.189 | 6.32 |
| ih_rmad | 0.695 | 0.035 | 0.189 | 6.43 |
| szm_lgze_3D | 0.695 | 0.035 | 0.189 | 27.76 |
| dzm_lgze_3D | 0.695 | 0.035 | 0.189 | 27.76 |
| stat_p90 | 0.695 | 0.035 | 0.189 | 32.76 |
| szm_sze_3D | 0.692 | 0.037 | 0.189 | 8.29 |
| stat_medad | 0.692 | 0.037 | 0.189 | 38.74 |
| stat_mad | 0.692 | 0.037 | 0.189 | 39.55 |
| stat_var | 0.692 | 0.037 | 0.189 | 67.93 |
| szm_zsnu_norm_3D | 0.687 | 0.042 | 0.189 | 14.46 |
| rlm_gl_var_3D_comb | 0.687 | 0.042 | 0.189 | 18.56 |
| ngl_gl_var_3D | 0.687 | 0.042 | 0.189 | 18.79 |
| ih_qcod | 0.686 | 0.045 | 0.189 | 9.25 |
| stat_cov | 0.685 | 0.045 | 0.189 | 17.86 |
| stat_rmad | 0.685 | 0.045 | 0.189 | 39.89 |
| rlm_lrhge_3D_comb | 0.682 | 0.049 | 0.189 | 8.20 |
| ivh_diff_i10_i90 | 0.682 | 0.049 | 0.189 | 39.30 |
| morph_area_dens_mvee | 0.68 | 0.052 | 0.189 | 10.17 |
The radiomic features are sorted by p‐value and the first 31 radiomic features showing p‐values less than 5% are listed. In addition to p‐values, the results of false discovery rate correction are shown in q‐values column. In the first column, radiomic features with a COV less than 5% are highlighted in green. For a better display of the features showing a COV between 5% and 10% are highlighted in blue. In the last column, a COV less than 5%, 5% < COV < 10%, 10% < COV < 20%, and a COV > 20% are highlighted in dark blue, pale blue, pale red, and dark red, respectively.