Literature DB >> 35325240

CDK12 Is Necessary to Promote Epidermal Differentiation Through Transcription Elongation.

Jingting Li1, Manisha Tiwari2, Yifang Chen2, Sudjit Luanpitpong3, George L Sen2.   

Abstract

Proper differentiation of the epidermis is essential to prevent water loss and to protect the body from the outside environment. Perturbations in this process can lead to a variety of skin diseases that impacts 1 in 5 people. While transcription factors that control epidermal differentiation have been well characterized, other aspects of transcription control such as elongation are poorly understood. Here we show that of the two cyclin-dependent kinases (CDK12 and CDK13), that are known to regulate transcription elongation, only CDK12 is necessary for epidermal differentiation. Depletion of CDK12 led to loss of differentiation gene expression and absence of skin barrier formation in regenerated human epidermis. CDK12 binds to genes that code for differentiation promoting transcription factors (GRHL3, KLF4, and OVOL1) and is necessary for their elongation. CDK12 is necessary for elongation by promoting Ser2 phosphorylation on the C-terminal domain of RNA polymerase II and the stabilization of binding of the elongation factor SPT6 to target genes. Our results suggest that control of transcription elongation by CDK12 plays a prominent role in adult cell fate decisions.
© The Author(s) 2022. Published by Oxford University Press. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  CDK12; CDK13; ChIP-Seq; GRHL1; GRHL3: KLF4; OVOL1; RNA polymerase II; SPT6; SUPT6H; differentiation; elongation; epidermis; keratinocytes; skin barrier; skin differentiation; stem cell; stratum corneum; transcription

Mesh:

Substances:

Year:  2022        PMID: 35325240      PMCID: PMC9199850          DOI: 10.1093/stmcls/sxac002

Source DB:  PubMed          Journal:  Stem Cells        ISSN: 1066-5099            Impact factor:   5.845


  70 in total

1.  The Cohesin Complex Is Necessary for Epidermal Progenitor Cell Function through Maintenance of Self-Renewal Genes.

Authors:  Maria Noutsou; Jingting Li; Ji Ling; Jackson Jones; Ying Wang; Yifang Chen; George L Sen
Journal:  Cell Rep       Date:  2017-09-26       Impact factor: 9.423

Review 2.  Genetic pathways in disorders of epidermal differentiation.

Authors:  Vanessa Lopez-Pajares; Karen Yan; Brian J Zarnegar; Katherine L Jameson; Paul A Khavari
Journal:  Trends Genet       Date:  2012-11-08       Impact factor: 11.639

3.  Lineage-specific dynamic and pre-established enhancer-promoter contacts cooperate in terminal differentiation.

Authors:  Adam J Rubin; Brook C Barajas; Mayra Furlan-Magaril; Vanessa Lopez-Pajares; Maxwell R Mumbach; Imani Howard; Daniel S Kim; Lisa D Boxer; Jonathan Cairns; Mikhail Spivakov; Steven W Wingett; Minyi Shi; Zhixin Zhao; William J Greenleaf; Anshul Kundaje; Michael Snyder; Howard Y Chang; Peter Fraser; Paul A Khavari
Journal:  Nat Genet       Date:  2017-08-14       Impact factor: 38.330

4.  Structure of activated transcription complex Pol II-DSIF-PAF-SPT6.

Authors:  Seychelle M Vos; Lucas Farnung; Marc Boehning; Christoph Wigge; Andreas Linden; Henning Urlaub; Patrick Cramer
Journal:  Nature       Date:  2018-08-22       Impact factor: 49.962

Review 5.  Epithelial stem cells in adult skin.

Authors:  Ana Mafalda Baptista Tadeu; Valerie Horsley
Journal:  Curr Top Dev Biol       Date:  2014       Impact factor: 4.897

6.  Mutations in the rod domains of keratins 1 and 10 in epidermolytic hyperkeratosis.

Authors:  J A Rothnagel; A M Dominey; L D Dempsey; M A Longley; D A Greenhalgh; T A Gagne; M Huber; E Frenk; D Hohl; D R Roop
Journal:  Science       Date:  1992-08-21       Impact factor: 47.728

7.  DDX6 Orchestrates Mammalian Progenitor Function through the mRNA Degradation and Translation Pathways.

Authors:  Ying Wang; Marc Arribas-Layton; Yifang Chen; Jens Lykke-Andersen; George L Sen
Journal:  Mol Cell       Date:  2015-09-24       Impact factor: 17.970

8.  Generation of Genetically Modified Organotypic Skin Cultures Using Devitalized Human Dermis.

Authors:  Jingting Li; George L Sen
Journal:  J Vis Exp       Date:  2015-12-14       Impact factor: 1.355

9.  CDK12 loss in cancer cells affects DNA damage response genes through premature cleavage and polyadenylation.

Authors:  Malgorzata Krajewska; Ruben Dries; Andrew V Grassetti; Sofia Dust; Yang Gao; Hao Huang; Bandana Sharma; Daniel S Day; Nicholas Kwiatkowski; Monica Pomaville; Oliver Dodd; Edmond Chipumuro; Tinghu Zhang; Arno L Greenleaf; Guo-Cheng Yuan; Nathanael S Gray; Richard A Young; Matthias Geyer; Scott A Gerber; Rani E George
Journal:  Nat Commun       Date:  2019-04-15       Impact factor: 14.919

10.  CDK12 globally stimulates RNA polymerase II transcription elongation and carboxyl-terminal domain phosphorylation.

Authors:  Michael Tellier; Justyna Zaborowska; Livia Caizzi; Eusra Mohammad; Taras Velychko; Björn Schwalb; Ivan Ferrer-Vicens; Daniel Blears; Takayuki Nojima; Patrick Cramer; Shona Murphy
Journal:  Nucleic Acids Res       Date:  2020-08-20       Impact factor: 16.971

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