Literature DB >> 3532031

Promoter selectivity of Escherichia coli RNA polymerase: alteration by fMet-tRNAfMet.

T Nomura, N Fujita, A Ishihama.   

Abstract

An in vitro mixed transcription system was employed to examine the possible alteration of the promoter selectivity of Escherichia coli RNA polymerase by specific tRNAs. Transcription in vitro was inhibited by most of the tRNAs examined, although the extent of the inhibition differed with the tRNA species. The inhibition by tRNAs was due to competition with DNA for binding RNA polymerase. This inhibitory effect remained after charging of the tRNAs with amino acids. The charging of tRNAfMet with fMet, but not with Met, abolished its inhibitory effect, and instead gave a stimulatory effect on the transcription from some promoters. These observations suggest that fMet-tRNAfMet plays a specific regulatory role in the coupling of transcription to translation.

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Year:  1986        PMID: 3532031      PMCID: PMC311704          DOI: 10.1093/nar/14.17.6857

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  30 in total

1.  Purification and properties of a soluble factor required for the deoxyribonucleic acid-directed in vitro synthesis of beta-galactosidase.

Authors:  H Kung; C Spears; H Weissbach
Journal:  J Biol Chem       Date:  1975-02-25       Impact factor: 5.157

2.  Inhibition of RNA polymerase by RNA.

Authors:  A TISSIERES; S BOURGEOIS; F GROS
Journal:  J Mol Biol       Date:  1963-07       Impact factor: 5.469

3.  Construction of plasmids carrying the cI gene of bacteriophage lambda.

Authors:  K Backman; M Ptashne; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

4.  Regulation of ribosomal and transfer RNA synthesis.

Authors:  C G KURLAND; O MAALOE
Journal:  J Mol Biol       Date:  1962-03       Impact factor: 5.469

5.  A simple procedure for resolution of Escherichia coli RNA polymerase holoenzyme from core polymerase.

Authors:  N Gonzalez; J Wiggs; M J Chamberlin
Journal:  Arch Biochem Biophys       Date:  1977-08       Impact factor: 4.013

6.  On the relation between ribonucleic acid synthesis and peptide chain initiation in E. coli.

Authors:  A Y Shih; J Eisenstadt; P Lengyel
Journal:  Proc Natl Acad Sci U S A       Date:  1966-11       Impact factor: 11.205

Review 7.  RNA polymerase specificity and the control of growth.

Authors:  A Travers
Journal:  Nature       Date:  1976-10-21       Impact factor: 49.962

8.  Heterogeneity of RNA polymerase in Escherichia coli. I. A new holoenzyme containing a new sigma factor.

Authors:  R Fukuda; Y Iwakura; A Ishihama
Journal:  J Mol Biol       Date:  1974-03       Impact factor: 5.469

9.  Specific binding of formylated initiator-tRNA to Escherichia coli RNA polymerase.

Authors:  O Pongs; N Ulbrich
Journal:  Proc Natl Acad Sci U S A       Date:  1976-09       Impact factor: 11.205

10.  Growth and initiation of protein synthesis in Escherichia coli in the presence of trimethoprim.

Authors:  R J Harvey
Journal:  J Bacteriol       Date:  1973-04       Impact factor: 3.490

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  15 in total

1.  Transcriptional activation of NtcA-dependent promoters of Synechococcus sp. PCC 7942 by 2-oxoglutarate in vitro.

Authors:  Ryohei Tanigawa; Masao Shirokane; Shin-ichi Maeda Si; Tatsuo Omata; Kan Tanaka; Hideo Takahashi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-26       Impact factor: 11.205

2.  Thymine at -5 is crucial for cpc promoter activity of Synechocystis sp. strain PCC 6714.

Authors:  Masahiko Imashimizu; Shoko Fujiwara; Ryohei Tanigawa; Kan Tanaka; Takatsugu Hirokawa; Yuji Nakajima; Junichi Higo; Mikio Tsuzuki
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

3.  Promoter selectivity of Escherichia coli RNA polymerase: effect of base substitutions in the promoter -35 region on promoter strength.

Authors:  M Kobayashi; K Nagata; A Ishihama
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

4.  The nucleotide-binding site of bacterial translation initiation factor 2 (IF2) as a metabolic sensor.

Authors:  Pohl Milon; Eugene Tischenko; Jerneja Tomsic; Enrico Caserta; Gert Folkers; Anna La Teana; Marina V Rodnina; Cynthia L Pon; Rolf Boelens; Claudio O Gualerzi
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-12       Impact factor: 11.205

5.  Promoter selectivity of Escherichia coli RNA polymerase sigmaF holoenzyme involved in transcription of flagellar and chemotaxis genes.

Authors:  T K Kundu; S Kusano; A Ishihama
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

6.  A stationary phase protein in Escherichia coli with binding activity to the major sigma subunit of RNA polymerase.

Authors:  M Jishage; A Ishihama
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

7.  Host control of plasmid replication: requirement for the sigma factor sigma 32 in transcription of mini-F replication initiator gene.

Authors:  C Wada; M Imai; T Yura
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

8.  Structure of the 5' upstream region and the regulation of the rpoS gene of Escherichia coli.

Authors:  Y Takayanagi; K Tanaka; H Takahashi
Journal:  Mol Gen Genet       Date:  1994-06-03

9.  Promoter determinants for Escherichia coli RNA polymerase holoenzyme containing sigma 38 (the rpoS gene product).

Authors:  K Tanaka; S Kusano; N Fujita; A Ishihama; H Takahashi
Journal:  Nucleic Acids Res       Date:  1995-03-11       Impact factor: 16.971

10.  A partially functional 245-amino-acid internal deletion derivative of Escherichia coli sigma 70.

Authors:  A Kumar; H S Williamson; N Fujita; A Ishihama; R S Hayward
Journal:  J Bacteriol       Date:  1995-09       Impact factor: 3.490

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