Literature DB >> 11917135

Transcriptional activation of NtcA-dependent promoters of Synechococcus sp. PCC 7942 by 2-oxoglutarate in vitro.

Ryohei Tanigawa1, Masao Shirokane, Shin-ichi Maeda Si, Tatsuo Omata, Kan Tanaka, Hideo Takahashi.   

Abstract

The transcription factor NtcA is a global regulator of nitrogen homeostasis in cyanobacteria. It thus positively regulates the expression of genes related to nitrogen assimilation such as glnA (which encodes glutamine synthetase) and ntcA itself in response to nitrogen shortage or depletion. The binding of NtcA to the glnA and ntcA promoters of Synechococcus sp. PCC 7942 in vitro now has been shown to be enhanced by 2-oxoglutarate. In vitro analysis of gene transcription also revealed that the interaction of NtcA with its promoter element was not sufficient for activation of transcription, and 2-oxoglutarate was required for transcriptional initiation by NtcA. Given that the intracellular concentration of 2-oxoglutarate is inversely related to nitrogen availability, it is proposed that this metabolite functions as a signaling molecule that transmits information on cellular nitrogen status to NtcA and thereby regulates the transcription of genes related to nitrogen assimilation in cyanobacteria.

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Year:  2002        PMID: 11917135      PMCID: PMC123634          DOI: 10.1073/pnas.072587199

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  Specificity crosstalk among group 1 and group 2 sigma factors in the cyanobacterium Synechococcus sp. PCC7942: In vitro specificity and a phylogenetic analysis.

Authors:  A Goto-Seki; M Shirokane; S Masuda; K Tanaka; H Takahashi
Journal:  Mol Microbiol       Date:  1999-11       Impact factor: 3.501

Review 2.  Nitrogen control in cyanobacteria.

Authors:  A Herrero; A M Muro-Pastor; E Flores
Journal:  J Bacteriol       Date:  2001-01       Impact factor: 3.490

3.  Examination of the transcription factor NtcA-binding motif by in vitro selection of DNA sequences from a random library.

Authors:  F Jiang; S Wisén; M Widersten; B Bergman; B Mannervik
Journal:  J Mol Biol       Date:  2000-08-25       Impact factor: 5.469

4.  Cyanobacteria perceive nitrogen status by sensing intracellular 2-oxoglutarate levels.

Authors:  M I Muro-Pastor; J C Reyes; F J Florencio
Journal:  J Biol Chem       Date:  2001-07-30       Impact factor: 5.157

Review 5.  Phototrophic prokaryotes: the cyanobacteria.

Authors:  R Y Stanier; G Cohen-Bazire
Journal:  Annu Rev Microbiol       Date:  1977       Impact factor: 15.500

6.  Promoter selectivity of Escherichia coli RNA polymerase: alteration by fMet-tRNAfMet.

Authors:  T Nomura; N Fujita; A Ishihama
Journal:  Nucleic Acids Res       Date:  1986-09-11       Impact factor: 16.971

7.  The global nitrogen regulator NtcA regulates transcription of the signal transducer PII (GlnB) and influences its phosphorylation level in response to nitrogen and carbon supplies in the Cyanobacterium synechococcus sp. strain PCC 7942.

Authors:  H M Lee; M F Vázquez-Bermúdez; N T de Marsac
Journal:  J Bacteriol       Date:  1999-05       Impact factor: 3.490

8.  Genetic engineering of the cyanobacterial chromosome.

Authors:  S S Golden; J Brusslan; R Haselkorn
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

9.  Regulation of nitrogen metabolism in Escherichia coli and Klebsiella aerogenes: studies with the continuous-culture technique.

Authors:  P J Senior
Journal:  J Bacteriol       Date:  1975-08       Impact factor: 3.490

10.  Pathways of assimilation of [13N]N2 and 13NH4+ by cyanobacteria with and without heterocysts.

Authors:  J C Meeks; C P Wolk; W Lockau; N Schilling; P W Shaffer; W S Chien
Journal:  J Bacteriol       Date:  1978-04       Impact factor: 3.490

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  69 in total

1.  Signal transduction protein P(II) is required for NtcA-regulated gene expression during nitrogen deprivation in the cyanobacterium Synechococcus elongatus strain PCC 7942.

Authors:  M Fadi Aldehni; Jörg Sauer; Christian Spielhaupter; Roland Schmid; Karl Forchhammer
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

2.  Decoupling of ammonium regulation and ntcA transcription in the diazotrophic marine cyanobacterium Trichodesmium sp. IMS101.

Authors:  Anton F Post; Branko Rihtman; Qingfeng Wang
Journal:  ISME J       Date:  2011-09-22       Impact factor: 10.302

3.  Thymine at -5 is crucial for cpc promoter activity of Synechocystis sp. strain PCC 6714.

Authors:  Masahiko Imashimizu; Shoko Fujiwara; Ryohei Tanigawa; Kan Tanaka; Takatsugu Hirokawa; Yuji Nakajima; Junichi Higo; Mikio Tsuzuki
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

4.  Open reading frame all0601 from Anabaena sp. strain PCC 7120 represents a novel gene, cnaT, required for expression of the nitrate assimilation nir operon.

Authors:  José E Frías; Antonia Herrero; Enrique Flores
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

Review 5.  A renaissance of metabolite sensing and signaling: from modular domains to riboswitches.

Authors:  George W Templeton; Greg B G Moorhead
Journal:  Plant Cell       Date:  2004-09       Impact factor: 11.277

6.  A novel gene (narM) required for expression of nitrate reductase activity in the cyanobacterium Synechococcus elongatus strain PCC7942.

Authors:  Shin-ichi Maeda; Tatsuo Omata
Journal:  J Bacteriol       Date:  2004-04       Impact factor: 3.490

7.  Structural basis for the regulation of NtcA-dependent transcription by proteins PipX and PII.

Authors:  José L Llácer; Javier Espinosa; Miguel A Castells; Asunción Contreras; Karl Forchhammer; Vicente Rubio
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-17       Impact factor: 11.205

Review 8.  Cyanobacterial heterocysts.

Authors:  Krithika Kumar; Rodrigo A Mella-Herrera; James W Golden
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-02-24       Impact factor: 10.005

9.  HetR-dependent and -independent expression of heterocyst-related genes in an Anabaena strain overproducing the NtcA transcription factor.

Authors:  Elvira Olmedo-Verd; Enrique Flores; Antonia Herrero; Alicia M Muro-Pastor
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

10.  The NtcA-dependent P1 promoter is utilized for glnA expression in N2-fixing heterocysts of Anabaena sp. strain PCC 7120.

Authors:  Ana Valladares; Alicia M Muro-Pastor; Antonia Herrero; Enrique Flores
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

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