Literature DB >> 35309007

Recurrent Neural Network based Time-Series Modeling for Long-term Prognosis Following Acute Traumatic Brain Injury.

Amin Nayebi1, Sindhu Tipirneni2, Brandon Foreman3, Jonathan Ratcliff4, Chandan K Reddy2, Vignesh Subbian1.   

Abstract

We developed a prognostic model for longer-term outcome prediction in traumatic brain injury (TBI) using an attention-based recurrent neural network (RNN). The model was trained on admission and time series data obtained from a multi-site, longitudinal, observational study of TBI patients. We included 110 clinical variables as model input and Glasgow Outcome Score Extended (GOSE) at six months after injury as the outcome variable. Designed to handle missing values in time series data, the RNN model was compared to an existing TBI prognostic model using 10-fold cross validation. The area under receiver operating characteristic curve (AUC) for the RNN model is 0.86 (95% CI 0.83-0.89) for binary outcomes, whereas the AUC of the comparison model is 0.69 (95% CI 0.67-0.71). We demonstrated that including time series data into prognostic models for TBI can boost the discriminative ability of prediction models with either binary or ordinal outcomes. ©2021 AMIA - All rights reserved.

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Year:  2022        PMID: 35309007      PMCID: PMC8861707     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  16 in total

Review 1.  Prediction of outcome in severe traumatic brain injury.

Authors:  David K Menon; Cameron Zahed
Journal:  Curr Opin Crit Care       Date:  2009-10       Impact factor: 3.687

2.  A systematic review shows no performance benefit of machine learning over logistic regression for clinical prediction models.

Authors:  Evangelia Christodoulou; Jie Ma; Gary S Collins; Ewout W Steyerberg; Jan Y Verbakel; Ben Van Calster
Journal:  J Clin Epidemiol       Date:  2019-02-11       Impact factor: 6.437

3.  Cost-sensitive Performance Metric for Comparing Multiple Ordinal Classifiers.

Authors:  Nysia I George; Tzu-Pin Lu; Ching-Wei Chang
Journal:  Artif Intell Res       Date:  2016-01-15

4.  Outcome prediction after mild and complicated mild traumatic brain injury: external validation of existing models and identification of new predictors using the TRACK-TBI pilot study.

Authors:  Hester F Lingsma; John K Yue; Andrew I R Maas; Ewout W Steyerberg; Geoffrey T Manley
Journal:  J Neurotrauma       Date:  2014-11-25       Impact factor: 5.269

5.  Development of a Prediction Model for Post-Concussive Symptoms following Mild Traumatic Brain Injury: A TRACK-TBI Pilot Study.

Authors:  Maryse C Cnossen; Ethan A Winkler; John K Yue; David O Okonkwo; Alex Valadka; Ewout W Steyerberg; Hester Lingsma; Geoffrey T Manley
Journal:  J Neurotrauma       Date:  2017-03-27       Impact factor: 5.269

6.  Predicting outcome after traumatic brain injury: practical prognostic models based on large cohort of international patients.

Authors:  Pablo Perel; Miguel Arango; Tim Clayton; Phil Edwards; Edward Komolafe; Stuart Poccock; Ian Roberts; Haleema Shakur; Ewout Steyerberg; Surakrant Yutthakasemsunt
Journal:  BMJ       Date:  2008-02-12

7.  Transforming research and clinical knowledge in traumatic brain injury pilot: multicenter implementation of the common data elements for traumatic brain injury.

Authors:  John K Yue; Mary J Vassar; Hester F Lingsma; Shelly R Cooper; David O Okonkwo; Alex B Valadka; Wayne A Gordon; Andrew I R Maas; Pratik Mukherjee; Esther L Yuh; Ava M Puccio; David M Schnyer; Geoffrey T Manley
Journal:  J Neurotrauma       Date:  2013-09-24       Impact factor: 5.269

8.  Challenges associated with missing data in electronic health records: A case study of a risk prediction model for diabetes using data from Slovenian primary care.

Authors:  Gregor Stiglic; Primoz Kocbek; Nino Fijacko; Aziz Sheikh; Majda Pajnkihar
Journal:  Health Informatics J       Date:  2017-10-13       Impact factor: 2.681

9.  Disability after severe head injury: observations on the use of the Glasgow Outcome Scale.

Authors:  B Jennett; J Snoek; M R Bond; N Brooks
Journal:  J Neurol Neurosurg Psychiatry       Date:  1981-04       Impact factor: 10.154

10.  Recurrent Neural Networks for Multivariate Time Series with Missing Values.

Authors:  Zhengping Che; Sanjay Purushotham; Kyunghyun Cho; David Sontag; Yan Liu
Journal:  Sci Rep       Date:  2018-04-17       Impact factor: 4.379

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