| Literature DB >> 35308575 |
Yan-Qun Sun1,2, Tao Wang1, Yuan-Yuan Zhang1, Tian-Le Che1, Fan-Fei Meng1, Ai-Ying Teng1, Mei-Chen Liu1, Ting-Ting Li1, Bao-Gui Jiang1, Qiang Xu1, Chen-Long Lv1, Jin-Jin Chen1, Nan Zhou2, Simon I Hay3,4, Li-Qun Fang1, Wei Liu1.
Abstract
Background: Emerging vector-borne pathogens (VBPs) pose a continuous background threat to the global health. Knowledge of the occurrence, distributions and epidemiological characteristics of VBP are lacking in many countries. Outbreaks of novel VBP are of increasing global interest including those arising in China.Entities:
Year: 2022 PMID: 35308575 PMCID: PMC8928082 DOI: 10.1016/j.lanwpc.2022.100427
Source DB: PubMed Journal: Lancet Reg Health West Pac ISSN: 2666-6065
Figure 1PRISMA flow chart of article assessed for the review (A), and timelines of published articles (B) on neglected vector-borne pathogens in human infection in China. (A) Flowchart outlining the protocol adopted in this systematic review based on the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA); (B) The bars fill in the blank and marked with “*” represent the article published in 2021.
Characteristics of emerging and reemerging neglected vector-borne pathogens in human infection in China by etiology.
| Characteristic | Total | Virus | Rickettsiales bacteria | Spirochaetales bacteria | Other bacteria | Parasite | Multiple etiologies |
|---|---|---|---|---|---|---|---|
| | 906 (100·00) | 139 (15·34) | 347 (38·30) | 288 (31·79) | 65 (7·17) | 44 (4·86) | 23 (2·54) |
| Study design, | |||||||
| Case report or case series | 244 (26·93) | 23 (16·55) | 67 (19·31) | 84 (29·17) | 37 (56·92) | 31 (70·45) | 2 (8·70) |
| Symptomatic series | 98 (10·82) | 17 (12·23) | 39 (11·24) | 22 (7·64) | 3 (4·62) | 11 (25·00) | 6 (26·09) |
| Seroprevalence studies | 564 (62·25) | 99(71·22) | 241 (69·45) | 182 (63·19) | 25 (38·46) | 2 (4·55) | 15 (65·22) |
| Age range, | |||||||
| Pediatric | 104 (11·48) | 9 (6·47) | 80 (23·05) | 7 (2·43) | 5 (7·69) | 2 (4·55) | 1 (4·35) |
| Adult | 281 (31·02) | 19 (13·67) | 106 (30·55) | 90 (31·25) | 30 (46·15) | 31 (70·45) | 5 (21·74) |
| Mixed ages | 306 (33·77) | 68 (48·92) | 94 (27·09) | 110 (38·19) | 20 (30·77) | 4 (9·09) | 10 (43·48) |
| Unspecified | 215 (23·73) | 43 (30·94) | 67 (19·31) | 81 (28·12) | 10 (15·38) | 7 (15·91) | 7 (30·43) |
| Source of tested individuals, | |||||||
| Inpatients | 295 (32·56) | 25 (17·99) | 141 (40·63) | 66 (22·92) | 31 (47·69) | 29 (65·91) | 3 (13·04) |
| Outpatients | 17 (1·88) | 4 (2·88) | 4 (1·15) | 7 (2·43) | 1 (1·54) | 0 (0·00) | 1 (4·35) |
| Mixed patients | 221 (24·39) | 43 (30·94) | 114 (32·85) | 45 (15·62) | 11 (16·92) | 7 (15·91) | 1 (4·35) |
| Population-based | 326 (35·98) | 46 (33·09) | 72 (20·75) | 166 (57·64) | 20 (30·77) | 7 (15·91) | 15 (65·22) |
| Multiple origins | 47 (5·19) | 21 (15·11) | 16 (4·61) | 4 (1·39) | 2 (3·08) | 1 (2·27) | 3 (13·04) |
| Type of sampled area, | |||||||
| Rural | 234 (25·83) | 26 (18·71) | 65 (18·73) | 118 (40·97) | 6 (9·23) | 14 (31·82) | 5 (21·74) |
| Urban | 47 (5·19) | 9 (6·47) | 8 (2·31) | 20 (6·94) | 7 (10·77) | 2 (4·55) | 1 (4·35) |
| Multiple areas | 479 (52·87) | 67 (48·20) | 228 (65·71) | 126 (43·75) | 27 (41·54) | 19 (43·18) | 12 (52·17) |
| Unspecified | 146 (16·11) | 37 (26·62) | 46 (13·26) | 24 (8·33) | 25 (38·46) | 9 (20·45) | 5 (21·74) |
| Type of testing method, | |||||||
| Serological | 660 (72·85) | 97 (69·78) | 276 (79·54) | 239 (82·99) | 30 (46·15) | 3 (6·82) | 15 (65·22) |
| Molecular biology | 97 (10·71) | 19 (13·67) | 36 (10·37) | 18 (6·25) | 6 (9·23) | 18 (40·91) | 0 (0·00) |
| Microscopy | 40 (4·42) | 0 (0·00) | 1 (0·29) | 5 (1·74) | 26 (40·00) | 8 (18·18) | 0 (0·00) |
| Culture | 8 (0·88) | 5 (3·60) | 2 (0·58) | 1 (0·35) | 0 (0·00) | 0 (0·00) | 0 (0·00) |
| Multiple methods | 101 (11·15) | 18 (12·95) | 32 (9·22) | 25 (8·68) | 3 (4·62) | 15 (34·09) | 8 (34·78) |
Emerging and reemerging neglected vector-borne pathogens in human infection in China.
| Pathogen names (Abbreviations) | Classification(family) | Classification(genus) | Transmission types | Types of specimens | Evidence of detection |
|---|---|---|---|---|---|
| Virus | |||||
| Barmah Forest virus (BFV) | Mosquito-borne | Blood, Cerebrospinal fluid | Molecular, Serological | ||
| Bebaru virus (BEBV) | Mosquito-borne | Blood | Serological | ||
| Chikungunya virus (CHIKV) | Mosquito-borne, Vertical Transmission | Blood | Molecular, Culture, Serological | ||
| Eastern equine encephalitis virus (EEEV) | Mosquito-borne | Blood | Serological | ||
| Getah virus (GETV) | Mosquito-borne | Blood | Serological | ||
| Mayaro virus (MAYV) | Mosquito-borne | Blood | Serological | ||
| Ross River virus (RRV) | Mosquito-borne | Blood, Cerebrospinal fluid | Molecular, Serological | ||
| Sagiyama virus (SAGV) | Mosquito-borne | Blood | Serological | ||
| Semliki forest virus (SFV) | Mosquito-borne | Blood | Serological | ||
| Sindbis virus (SINV) | Mosquito-borne | Blood, Cerebrospinal fluid | Molecular, Culture, Serological | ||
| Venezuelan equine encephalitis virus (VEEV) | Mosquito-borne | Blood | Serological | ||
| Western equine encephalitis virus (WEEV) | Mosquito-borne | Blood | Serological | ||
| Kunjin virus (KUN) | Mosquito-borne | Blood | Serological | ||
| Murray Valley encephalitis virus (MVEV) | Mosquito-borne | Blood | Serological | ||
| Saint Louis encephalitis virus (SLEV) | Mosquito-borne | Blood | Serological | ||
| West Nile virus (WNV) | Mosquito-borne | Blood, Cerebrospinal fluid | Serological | ||
| Zika virus (ZIKV) | Mosquito-borne | Blood | Molecular, Serological | ||
| Kyasanur Forest disease virus (KFDV) | Tick-borne | Blood | Molecular, Morphology, Culture, Serological | ||
| Langat virus (LGTV) | Tick-borne | Blood | Serological | ||
| Powassan virus (POWV) | Tick-borne | Blood, Cerebrospinal fluid | Serological | ||
| Alongshan virus | Tick-borne | Blood | Molecular | ||
| Jingmen tick virus | Tick-borne | Blood, Skin | Molecular, Serological | ||
| Coltiviruses-Old World | Mosquito-borne | Blood, Cerebrospinal fluid | Molecular, Culture, Serological | ||
| Novel orbivirus | Mosquito-borne | Blood | Serological | ||
| Tibet orbivirus | Mosquito-borne | Blood | Serological | ||
| Yunnan orbivirus | Mosquito-borne | Blood | Serological | ||
| Banna virus | Mosquito-borne | Blood, Cerebrospinal fluid | Molecular, Serological | ||
| MD virus | Mosquito-borne | Blood | Culture | ||
| Novel Seadornavirus | Mosquito-borne | Blood | Serological | ||
| Batai virus (BATV) | Mosquito-borne | Blood | Serological | ||
| Ebinur lake virus | Mosquito-borne | Blood | Molecular, Serological | ||
| Snowshoe hare virus (SSHV) | Mosquito-borne | Blood | Serological | ||
| Tahyna virus (TAHV) | Mosquito-borne | Blood | Molecular, Serological | ||
| Crimean-Congo hemorrhagic fever virus (CCHFV) | Tick-borne, Contact | Blood | Molecular, Culture, Serological | ||
| Songling virus | Tick-borne | Blood | Molecular | ||
| Tacheng tick virus 1 | Tick-borne | Blood, Throat swabs, Urine | Molecular, Serological | ||
| Guertu virus | Tick-borne | Blood | Serological | ||
| Wuxiang virus | Sandfly-borne | Blood | Serological | ||
| Tacheng tick virus 2 | Tick-borne | Blood | Molecular, Serological | ||
| Nam Dinh virus (NDV) | Mosquito-borne | Blood | Serological | ||
| Rickettsiales bacteria | |||||
| | Tick-borne | Blood | Serological | ||
| | Tick-borne | Blood, Puncture fluid | Molecular, Morphology, Serological | ||
| | Flea-borne | Blood, Cerebrospinal fluid | Molecular, Serological | ||
| | Tick-borne | Blood | Molecular, Serological | ||
| | Tick-borne | Blood | Serological | ||
| | Tick-borne | Blood | Molecular, Serological | ||
| | Tick-borne | Blood, Eschar | Molecular, Serological | ||
| | Tick-borne | Bronchoalveolar lavage fluid, Blood | Molecular, Serological | ||
| | Tick-borne | Blood | Molecular, Serological | ||
| | Tick-borne | Blood | Molecular | ||
| | Tick-borne | Blood, Eschar | Molecular, Morphology, Serological | ||
| | Tick-borne | Blood | Serological | ||
| | Tick-borne | Blood, Eschar | Molecular, Culture, Serological | ||
| | Tick-borne | Blood, Eschar | Molecular, Serological | ||
| | Tick-borne | Blood | Molecular, Serological | ||
| Uncharacterised spotted fever group | Tick-borne | Blood | Molecular, Culture, Serological | ||
| | Tick-borne | Blood | Molecular, Serological | ||
| | Tick-borne | Blood | Molecular, Serological | ||
| | Tick-borne, Air-borne | Blood | Molecular, Culture, Serological | ||
| | Tick-borne | Blood | Molecular | ||
| Spirochaetales bacteria | |||||
| | Tick-borne | Blood, Skin, Urine | Molecular, Serological | ||
| | Tick-borne | Blood | Serological | ||
| | Tick-borne | Blood, Cerebrospinal fluid, Skin, Urine | Molecular, Culture, Serological | ||
| | Tick-borne | Blood | Molecular | ||
| | Louse-borne | Blood, Cerebrospinal fluid | Morphology, Serological | ||
| | Tick-borne | Blood | Molecular, Serological | ||
| Uncharacterised | Tick-borne | Blood, Cerebrospinal fluid, Skin, Urine | Molecular, Morphology, Culture, Serological | ||
| Uncharacterised tick-borne relapsing fever | Tick-borne | Blood | Morphology | ||
| Other bacteria | |||||
| | Flea-borne | Blood | Serological | ||
| | Flea-borne, Cat-scratch | Blood, Lymph node, Skin | Molecular, Morphology, Serological | ||
| | Louse-borne | Blood | Serological | ||
| | Tick-borne | Blood | Molecular | ||
| | Tick-borne, Contact, Air-borne | Blood, Lymph node | Molecular, Morphology, Serological | ||
| Parasite | |||||
| | Tick-borne, Transfusion-transmitted | Blood, Bone marrow | Molecular, Morphology, Serological | ||
| | Tick-borne | Blood | Molecular, Morphology | ||
| | Tick-borne, Transfusion-transmitted | Blood | Serological | ||
| | Tick-borne | Blood | Molecular | ||
| | Tick-borne | Blood | Molecular, Morphology | ||
| | Tick-borne | Blood | Molecular | ||
| Uncharacterised | Tick-borne | Blood, Bone marrow, Faeces | Molecular, Morphology, Cultures, Serological | ||
| Uncharacterised | Tick-borne | Blood, Cerebrospinal fluid | Molecular, Morphology | ||
| Uncharacterised | Tick-borne | Blood | Molecular | ||
The 18 kinds of novel vector-borne pathogens detected in human infection discovered in China for the first time in the world.
The 9 kinds of vector-borne pathogens in human infection identified in China tentatively named by the authors.
The uncharacterised pathogens. The classification of family and genus of each pathogen was determined by the online taxonomy search websites, including International Committee on Taxonomy of Viruses (ICTV) (https://talk.ictvonline.org/) and National Center for Biotechnology Information (NCBI) Taxonomy (https://www.ncbi.nlm.nih.gov/taxonomy/).
We excluded vector-borne pathogens (including Rickettsia mooseri, Rickettsia prowazekii, Orientia tsutsugamushi, Plasmodium, Wuchereria bancrofti, Brugia malayi, Dengue virus, Japanese encephalitis virus, Leishmania spp., Anaplasma phagocytophilum, Dabie bandavirus, Tick-borne encephalitis virus) listed in the National Notifiable Diseases Surveillance System of China for the current analysis.
Figure 2Number of articles for each pathogen within each province in China from 1980 to 2021. In the Bubble diagram, the size of the circle represents the number of articles for each pathogen detected in each province. In the Cleveland dot chart, total count of articles of each pathogen were represented by using logarithmic converted length.
Figure 3Distribution of extracted records of VBP causing human infection in China from 1980 to 2021 (A), and the first identification site of 75 VBPs causing human infection in China from 1980 to 2021 (B). (A) Records number of extracted literatures in seven ecological regions. Within each ecological region, the bar diagram was used to illustrate the published article number by decade, and the total number was reflected by the background color. The bars fill in the blank and marked with “*” represent the article published in 2020s. Ⅰ= Northeast region (NE), Ⅱ=North China region (N), Ⅲ=Inner Mongolia-Xinjiang region (IMX), Ⅳ= Qinghai-Tibet region (QT), Ⅴ=Southwest region (SW), Ⅵ=Central China region (C) and Ⅶ=South China region (S); (B) The location where the pathogen was firstly identified in human population is determined at prefecture level as referred to the included literatures. The number of tested positive of each pathogen were extracted from the dataset. The abbreviation of each pathogen was shown in Table 2.
Figure 4Clustered Heat chart describing the weighed clinical presentations of each pathogen (A), and Radar chart illustrating the seven common clinical presentations by etiology (B). (A) The clinical presentations were divided into: (a) flu-like presentations (fever, headache, dizziness, cough, fatigue, and chills), (b) gastrointestinal presentations (nausea, vomit, diarrhea, and jaundice), (c) motor presentations (myalgia and arthralgia), (d) dermatologic presentations (rash, eschar, erythema), (e) neurological presentations (meningeal irritation, facioplegia and epilepsy), (f) lymphaenopathy, (g) hemorrhage. Six clusters were obtained according to the complete cluster analysis of clinical presentations; (B) Seven clinical presentations: fever, headache, dizziness, fatigue, chills, rash, and myalgia.