Literature DB >> 35304570

A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis.

Rhudaina Z Mohammad1,2, Hideki Murakawa3, Karel Svadlenka4,5, Hideru Togashi6,7.   

Abstract

Among morphological phenomena, cellular patterns in developing sensory epithelia have gained attention in recent years. Although physical models for cellular rearrangements are well-established thanks to a large bulk of experimental work, their computational implementation lacks solid mathematical background and involves experimentally unreachable parameters. Here we introduce a level set-based computational framework as a tool to rigorously investigate evolving cellular patterns, and study its mathematical and computational properties. We illustrate that a compelling feature of the method is its ability to correctly handle complex topology changes, including frequent cell intercalations. Combining this accurate numerical scheme with an established mathematical model, we show that the proposed framework features minimum possible number of parameters and is capable of reproducing a wide range of tissue morphological phenomena, such as cell sorting, engulfment or internalization. In particular, thanks to precise mathematical treatment of cellular intercalations, this method succeeds in simulating experimentally observed development of cellular mosaic patterns in sensory epithelia.
© 2022. The Author(s).

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Year:  2022        PMID: 35304570      PMCID: PMC8933555          DOI: 10.1038/s42003-022-03174-6

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  12 in total

1.  The mechanics of heterotypic cell aggregates: insights from computer simulations.

Authors:  G W Brodland; H H Chen
Journal:  J Biomech Eng       Date:  2000-08       Impact factor: 2.097

2.  The Differential Interfacial Tension Hypothesis (DITH): a comprehensive theory for the self-rearrangement of embryonic cells and tissues.

Authors:  G Wayne Brodland
Journal:  J Biomech Eng       Date:  2002-04       Impact factor: 2.097

3.  Roles of cell-adhesion molecules nectin 1 and nectin 3 in ciliary body development.

Authors:  Maiko Inagaki; Kenji Irie; Hiroyoshi Ishizaki; Miki Tanaka-Okamoto; Koji Morimoto; Eiji Inoue; Toshihisa Ohtsuka; Jun Miyoshi; Yoshimi Takai
Journal:  Development       Date:  2005-02-23       Impact factor: 6.868

4.  Myosin II regulates extension, growth and patterning in the mammalian cochlear duct.

Authors:  Norio Yamamoto; Takayuki Okano; Xuefei Ma; Robert S Adelstein; Matthew W Kelley
Journal:  Development       Date:  2009-05-13       Impact factor: 6.868

Review 5.  Implementing vertex dynamics models of cell populations in biology within a consistent computational framework.

Authors:  Alexander G Fletcher; James M Osborne; Philip K Maini; David J Gavaghan
Journal:  Prog Biophys Mol Biol       Date:  2013-10-09       Impact factor: 3.667

6.  Nectins establish a checkerboard-like cellular pattern in the auditory epithelium.

Authors:  Hideru Togashi; Kanoko Kominami; Masazumi Waseda; Hitomi Komura; Jun Miyoshi; Masatoshi Takeichi; Yoshimi Takai
Journal:  Science       Date:  2011-07-28       Impact factor: 47.728

7.  A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis.

Authors:  Rhudaina Z Mohammad; Hideki Murakawa; Karel Svadlenka; Hideru Togashi
Journal:  Commun Biol       Date:  2022-03-18

8.  Synergistic action of nectins and cadherins generates the mosaic cellular pattern of the olfactory epithelium.

Authors:  Sayaka Katsunuma; Hisao Honda; Tomoyasu Shinoda; Yukitaka Ishimoto; Takaki Miyata; Hiroshi Kiyonari; Takaya Abe; Ken-Ichi Nibu; Yoshimi Takai; Hideru Togashi
Journal:  J Cell Biol       Date:  2016-02-29       Impact factor: 10.539

Review 9.  Differential and Cooperative Cell Adhesion Regulates Cellular Pattern in Sensory Epithelia.

Authors:  Hideru Togashi
Journal:  Front Cell Dev Biol       Date:  2016-09-15
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  1 in total

1.  A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis.

Authors:  Rhudaina Z Mohammad; Hideki Murakawa; Karel Svadlenka; Hideru Togashi
Journal:  Commun Biol       Date:  2022-03-18
  1 in total

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