Literature DB >> 35296845

A kinase-cGAS cascade to synthesize a therapeutic STING activator.

John A McIntosh1, Zhijian Liu2, Brian M Andresen3, Nastaran Salehi Marzijarani4, Jeffrey C Moore4, Nicholas M Marshall4, Margie Borra-Garske5, Jennifer V Obligacion4, Patrick S Fier4, Feng Peng4, Jacob H Forstater4, Matthew S Winston4, Chihui An4, Wonsuk Chang6, Jongwon Lim6, Mark A Huffman4, Steven P Miller4, Fuh-Rong Tsay7, Michael D Altman6, Charles A Lesburg6, Dietrich Steinhuebel4, B Wesley Trotter6, Jared N Cumming6, Alan Northrup6, Xiaodong Bu7, Benjamin F Mann7, Mirlinda Biba7, Kaori Hiraga4, Grant S Murphy4, Joshua N Kolev4, Amanda Makarewicz4, Weilan Pan4, Iman Farasat4, Rachel S Bade4, Kevin Stone4, Da Duan5, Oscar Alvizo5, Donovan Adpressa6, Erik Guetschow7, Erik Hoyt7, Erik L Regalado4,7, Steve Castro7, Nelo Rivera7, Joseph P Smith7, Fengqiang Wang7, Alejandro Crespo4, Deeptak Verma4, Stephanus Axnanda7, Zachary E X Dance7, Paul N Devine4, David Tschaen4, Keith A Canada4, Paul G Bulger4, Benjamin D Sherry4, Matthew D Truppo4, Rebecca T Ruck4, Louis-Charles Campeau4, David Jonathan Bennett6, Guy R Humphrey4, Kevin R Campos4, Matthew L Maddess4.   

Abstract

The introduction of molecular complexity in an atom- and step-efficient manner remains an outstanding goal in modern synthetic chemistry. Artificial biosynthetic pathways are uniquely able to address this challenge by using enzymes to carry out multiple synthetic steps simultaneously or in a one-pot sequence1-3. Conducting biosynthesis ex vivo further broadens its applicability by avoiding cross-talk with cellular metabolism and enabling the redesign of key biosynthetic pathways through the use of non-natural cofactors and synthetic reagents4,5. Here we describe the discovery and construction of an enzymatic cascade to MK-1454, a highly potent stimulator of interferon genes (STING) activator under study as an immuno-oncology therapeutic6,7 (ClinicalTrials.gov study NCT04220866 ). From two non-natural nucleotide monothiophosphates, MK-1454 is assembled diastereoselectively in a one-pot cascade, in which two thiotriphosphate nucleotides are simultaneously generated biocatalytically, followed by coupling and cyclization catalysed by an engineered animal cyclic guanosine-adenosine synthase (cGAS). For the thiotriphosphate synthesis, three kinase enzymes were engineered to develop a non-natural cofactor recycling system in which one thiotriphosphate serves as a cofactor in its own synthesis. This study demonstrates the substantial capacity that currently exists to use biosynthetic approaches to discover and manufacture complex, non-natural molecules.
© 2022. The Author(s), under exclusive licence to Springer Nature Limited.

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Year:  2022        PMID: 35296845     DOI: 10.1038/s41586-022-04422-9

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  31 in total

Review 1.  Artificial Biocatalytic Linear Cascades for Preparation of Organic Molecules.

Authors:  Joerg H Schrittwieser; Stefan Velikogne; Mélanie Hall; Wolfgang Kroutil
Journal:  Chem Rev       Date:  2017-05-08       Impact factor: 60.622

Review 2.  Eight Kinetically Stable but Thermodynamically Activated Molecules that Power Cell Metabolism.

Authors:  Christopher T Walsh; Benjamin P Tu; Yi Tang
Journal:  Chem Rev       Date:  2017-12-22       Impact factor: 60.622

3.  Design of an in vitro biocatalytic cascade for the manufacture of islatravir.

Authors:  Mark A Huffman; Anna Fryszkowska; Oscar Alvizo; Margie Borra-Garske; Kevin R Campos; Keith A Canada; Paul N Devine; Da Duan; Jacob H Forstater; Shane T Grosser; Holst M Halsey; Gregory J Hughes; Junyong Jo; Leo A Joyce; Joshua N Kolev; Jack Liang; Kevin M Maloney; Benjamin F Mann; Nicholas M Marshall; Mark McLaughlin; Jeffrey C Moore; Grant S Murphy; Christopher C Nawrat; Jovana Nazor; Scott Novick; Niki R Patel; Agustina Rodriguez-Granillo; Sandra A Robaire; Edward C Sherer; Matthew D Truppo; Aaron M Whittaker; Deeptak Verma; Li Xiao; Yingju Xu; Hao Yang
Journal:  Science       Date:  2019-12-06       Impact factor: 47.728

Review 4.  Synthetic Biochemistry: The Bio-inspired Cell-Free Approach to Commodity Chemical Production.

Authors:  James U Bowie; Saken Sherkhanov; Tyler P Korman; Meaghan A Valliere; Paul H Opgenorth; Hongjiang Liu
Journal:  Trends Biotechnol       Date:  2020-01-23       Impact factor: 19.536

5.  Design, Synthesis, and Biological Evaluation of Novel Cyclic Adenosine-Inosine Monophosphate (cAIMP) Analogs That Activate Stimulator of Interferon Genes (STING).

Authors:  Thierry Lioux; Marc-Antoine Mauny; Alain Lamoureux; Nicolas Bascoul; Mathieu Hays; Fabienne Vernejoul; Anne-Sophie Baudru; Cédric Boularan; Justine Lopes-Vicente; Gregory Qushair; Gérard Tiraby
Journal:  J Med Chem       Date:  2016-11-04       Impact factor: 7.446

6.  Unlocking P(V): Reagents for chiral phosphorothioate synthesis.

Authors:  Kyle W Knouse; Justine N deGruyter; Michael A Schmidt; Bin Zheng; Julien C Vantourout; Cian Kingston; Stephen E Mercer; Ivar M Mcdonald; Richard E Olson; Ye Zhu; Chao Hang; Jason Zhu; Changxia Yuan; Qinggang Wang; Peter Park; Martin D Eastgate; Phil S Baran
Journal:  Science       Date:  2018-08-02       Impact factor: 47.728

7.  Complete biosynthesis of cannabinoids and their unnatural analogues in yeast.

Authors:  Xiaozhou Luo; Michael A Reiter; Leo d'Espaux; Jeff Wong; Charles M Denby; Anna Lechner; Yunfeng Zhang; Adrian T Grzybowski; Simon Harth; Weiyin Lin; Hyunsu Lee; Changhua Yu; John Shin; Kai Deng; Veronica T Benites; George Wang; Edward E K Baidoo; Yan Chen; Ishaan Dev; Christopher J Petzold; Jay D Keasling
Journal:  Nature       Date:  2019-02-27       Impact factor: 49.962

8.  Catalytic asymmetric and stereodivergent oligonucleotide synthesis.

Authors:  Aaron L Featherston; Yongseok Kwon; Matthew M Pompeo; Oliver D Engl; David K Leahy; Scott J Miller
Journal:  Science       Date:  2021-02-12       Impact factor: 47.728

9.  STING is a direct innate immune sensor of cyclic di-GMP.

Authors:  Dara L Burdette; Kathryn M Monroe; Katia Sotelo-Troha; Jeff S Iwig; Barbara Eckert; Mamoru Hyodo; Yoshihiro Hayakawa; Russell E Vance
Journal:  Nature       Date:  2011-09-25       Impact factor: 49.962

Review 10.  Directed Evolution: Bringing New Chemistry to Life.

Authors:  Frances H Arnold
Journal:  Angew Chem Int Ed Engl       Date:  2017-11-28       Impact factor: 15.336

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  2 in total

Review 1.  Recent Advances in Biocatalysis for Drug Synthesis.

Authors:  Alina Kinner; Philipp Nerke; Regine Siedentop; Till Steinmetz; Thomas Classen; Katrin Rosenthal; Markus Nett; Jörg Pietruszka; Stephan Lütz
Journal:  Biomedicines       Date:  2022-04-21

Review 2.  Complexity reduction and opportunities in the design, integration and intensification of biocatalytic processes for metabolite synthesis.

Authors:  Roland Wohlgemuth; Jennifer Littlechild
Journal:  Front Bioeng Biotechnol       Date:  2022-07-22
  2 in total

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