| Literature DB >> 35296245 |
Yindan Lin1, Ze Yang1, Jingjia Li1, Yandi Sun1, Xueyun Zhang1, Zihao Qu2, Yan Luo3, Lihong Zhang4.
Abstract
BACKGROUND: Respectively, prostate cancer (PCa) and breast cancer (BC) are the second most and most commonly diagnosed cancer in men and women, and they account for a majority of cancer-related deaths world-wide. Cancer cells typically exhibit much-facilitated growth that necessitates upregulated glycolysis and augmented amino acid metabolism, that of glutamine and aspartate in particular, which is tightly coupled with an increased flux of the tricarboxylic acid (TCA) cycle. Epidemiological studies have exploited metabolomics to explore the etiology and found potentially effective biomarkers for early detection or progression of prostate and breast cancers. However, large randomized controlled trials (RCTs) to establish causal associations between amino acid metabolism and prostate and breast cancers have not been reported.Entities:
Keywords: Aspartate; Breast cancer; Glutamate; Mendelian randomization; Prostate cancer
Mesh:
Substances:
Year: 2022 PMID: 35296245 PMCID: PMC8925075 DOI: 10.1186/s12864-022-08442-7
Source DB: PubMed Journal: BMC Genomics ISSN: 1471-2164 Impact factor: 3.969
Fig. 1The flowchart of Mendelian Randomization analysis of serum levels of glutamate and aspartate and risk of development of breast cancer and prostate cancer
Characteristics of the instrumental variables for glutamate and aspartate and the causal associations bewteen glutamate and aspartate with prostate and breast cancers
| Exposure | SNPs | Genea | Chromosome | Effect allele | Association with exposure | Association with prostate cancer | Association with breast cancer | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Betab | SEc | F | Betab | SEc | Betab | SEc | |||||||||
| Glutamate | SNP with genome-wide significance | — | — | — | — | — | — | — | |||||||
| rs239614 | 21 | G | 0.28 | 0.06 | 4.70E-08 | 0.0111 | 22 | 0.0080 | 0.0116 | 0.4895 | 0.0115 | 0.0087 | 0.1857 | ||
| Additional SNPs with | |||||||||||||||
| rs261076 | 5 | A | -0.16 | 0.05 | 1.90E-06 | 0.0051 | 10 | 0.0091 | 0.0100 | 0.3579 | 0.0105 | 0.0075 | 0.1584 | ||
| rs495578 | 5 | A | -0.17 | 0.04 | 3.30E-06 | 0.0091 | 18 | 0.0047 | 0.0105 | 0.6570 | 0.0056 | 0.0080 | 0.4845 | ||
| rs41308216 | 2 | G | -0.85 | 0.16 | 4.20E-06 | 0.0141 | 28 | 0.0114 | 0.0304 | 0.7077 | -0.0294 | 0.0237 | 0.2149 | ||
| rs10973935 | 9 | G | -0.35 | 0.09 | 4.30E-06 | 0.0076 | 15 | -0.0054 | 0.0184 | 0.7701 | 0.0024 | 0.0139 | 0.8623 | ||
| Aspartate | SNP with genome-wide significance | ||||||||||||||
| rs33966350 | 4 | A | -1.5 | 0.19 | 1.40E-17 | 0.0307 | 62 | -0.0425 | 0.0375 | 0.2565 | -0.0443 | 0.0272 | 0.1031 | ||
| rs113141482 | 10 | A | -0.98 | 0.19 | 1.00E-09 | 0.0136 | 27 | -0.1032 | 0.0497 | 0.0379 | -0.0185 | 0.0377 | 0.6233 | ||
| rs189080637 | 3 | A | -0.98 | 0.21 | 4.30E-08 | 0.0111 | 22 | -0.0370 | 0.0420 | 0.3779 | -0.0488 | 0.0315 | 0.1214 | ||
| Additional SNPs with | |||||||||||||||
| rs113367140 | 3 | A | -0.54 | 0.13 | 7.30E-08 | 0.0086 | 17 | -0.0179 | 0.0229 | 0.4348 | 0.0113 | 0.0176 | 0.5195 | ||
| rs6894601 | 5 | G | -0.16 | 0.04 | 1.90E-06 | 0.0081 | 16 | -0.0057 | 0.0088 | 0.5158 | 0.0083 | 0.0066 | 0.2078 | ||
| rs114190931 | 6 | T | 0.68 | 0.14 | 2.10E-06 | 0.0121 | 24 | -0.0077 | 0.0241 | 0.7505 | 0.0380 | 0.0187 | 0.0425 | ||
| rs76197627 | 16 | T | -0.49 | 0.13 | 2.20E-06 | 0.0071 | 14 | -0.0315 | 0.0289 | 0.2754 | -0.0038 | 0.0224 | 0.8634 | ||
| rs117109641 | 15 | T | 0.65 | 0.17 | 2.40E-06 | 0.0076 | 15 | 0.0084 | 0.0321 | 0.7931 | -0.0079 | 0.0240 | 0.7421 | ||
| rs35355649 | 1 | T | -0.17 | 0.05 | 2.60E-06 | 0.0061 | 12 | 0.0051 | 0.0097 | 0.6001 | 0.0010 | 0.0072 | 0.8932 | ||
| rs57037252 | 19 | T | -0.36 | 0.08 | 3.10E-06 | 0.0101 | 20 | 0.0088 | 0.0151 | 0.5596 | -0.0032 | 0.0113 | 0.7742 | ||
| rs79447732 | 8 | G | -0.54 | 0.14 | 3.40E-06 | 0.0076 | 15 | 0.0223 | 0.0269 | 0.4065 | -0.0101 | 0.0200 | 0.6113 | ||
| rs137948393 | 2 | G | 0.41 | 0.13 | 3.90E-06 | 0.0051 | 10 | 0.0673 | 0.0341 | 0.0487 | 0.0086 | 0.0260 | 0.7401 | ||
| rs75527467 | 3 | T | 1 | 0.3 | 4.10E-06 | 0.0056 | 11 | 0.0822 | 0.0389 | 0.0348 | -0.0142 | 0.0365 | 0.6974 | ||
a DOCK2 Dedicator of Cytokinesis 2, PDZD2 PDZ Domain containing 2, PIKFYVE Phosphoinositide Kinase, FYVE-type zinc finger containing, ANKRD18A Ankyrin Repeat Domain 18A, ENPEP glutamyl arninopeptidase, GPR158 G Protein-coupled Receptor 158, RTP4 Receptor Transporter Protein 4, JARID2 Jumonji and AT-rich Interaction Ddomain containing 2, MGRN1 Mahogunin Ring finger 1, APBA2 Amyloid Beta precursor Protein Binding family A member 2, ZNF559 Zinc Finger Protein 559, DLGAP2 DLG Associated Protein 2, SLC4A5 Solute Carrier family 4 member 5, ITPR1 Inositol 1,4,5-trisphosphate receptor type 1
b Beta, per allele effect on exposure or outcomes
c SE Standard Error
Fig. 2Causal associations between aspartate and prostate and breast cancers
Fig. 3Causal associations between glutamate and prostate and breast cancers
MR analysis using different methods for genetic associations between aspartate and prostate cancera
| MR method | Association | Heterogeneity | |||||
|---|---|---|---|---|---|---|---|
| Estimate | SEb | 95% CI (Down) | 95% CI (Up) | Q | |||
| Simple median | 0.038 | 0.030 | -0.021 | 0.096 | 0.206 | ||
| Weighted median | 0.032 | 0.023 | -0.012 | 0.077 | 0.155 | ||
| Penalized weighted median | 0.032 | 0.023 | -0.012 | 0.077 | 0.155 | ||
| IVW | 0.042 | 0.020 | 0.003 | 0.081 | 0.034 | 1.868 | 0.3932 |
| Penalized IVW | 0.042 | 0.020 | 0.003 | 0.081 | 0.034 | ||
| Robust IVW | 0.041 | 0.013 | 0.015 | 0.068 | 0.002 | ||
| Penalized robust IVW | 0.041 | 0.013 | 0.015 | 0.068 | 0.002 | ||
| MR-Egger | -0.042 | 0.097 | -0.232 | 0.147 | 0.660 | ||
| MR-Egger intercept | 0.106 | 0.118 | -0.126 | 0.338 | 0.370 | ||
| Penalized MR-Egger | -0.042 | 0.097 | -0.232 | 0.147 | 0.660 | ||
| Penalized MR-Egger intercept | 0.106 | 0.118 | -0.126 | 0.338 | 0.370 | ||
| Robust MR-Egger | -0.042 | 0.046 | -0.131 | 0.047 | 0.354 | ||
| Robust MR-Egger intercept | 0.106 | 0.068 | -0.028 | 0.240 | 0.121 | ||
| Penalized robust MR-Egger | -0.042 | 0.046 | -0.131 | 0.047 | 0.354 | ||
| Penalized robust MR-Egger intercept | 0.106 | 0.068 | -0.028 | 0.240 | 0.121 | ||
| Robust adjusted profile score | 0.043 | 0.041 | |||||
a Single nucleotide polymorphisms with genome-wide significance (P < 5 × 10–8) were used as genetic predictors
b SE Standard Error
MR analysis using different methods for genetic associations between aspartate and breast cancera
| MR method | Association | Heterogeneity | |||||
|---|---|---|---|---|---|---|---|
| Estimate | SE2 | 95% CI (Down) | 95% CI (Up) | Q | |||
| Simple median | 0.030 | 0.020 | -0.009 | 0.068 | 0.134 | ||
| Weighted median | 0.031 | 0.016 | -0.001 | 0.063 | 0.060 | ||
| Penalized weighted median | 0.031 | 0.016 | -0.001 | 0.063 | 0.060 | ||
| IVW | 0.032 | 0.015 | 0.004 | 0.061 | 0.028 | 0.4410 | 0.8021 |
| Penalized IVW | 0.032 | 0.015 | 0.004 | 0.061 | 0.028 | ||
| Robust IVW | 0.032 | 0.007 | 0.018 | 0.046 | 0.000 | ||
| Penalized robust IVW | 0.032 | 0.007 | 0.018 | 0.046 | 0.000 | ||
| MR-Egger | 0.015 | 0.070 | -0.122 | 0.152 | 0.827 | ||
| MR-Egger intercept | 0.021 | 0.086 | -0.148 | 0.191 | 0.805 | ||
| Penalized MR-Egger | 0.015 | 0.070 | -0.122 | 0.152 | 0.827 | ||
| Penalized MR-Egger intercept | 0.021 | 0.086 | -0.148 | 0.191 | 0.805 | ||
| Robust MR-Egger | 0.015 | 0.022 | -0.029 | 0.059 | 0.496 | ||
| Robust MR-Egger intercept | 0.021 | 0.033 | -0.044 | 0.087 | 0.521 | ||
| Penalized robust MR-Egger | 0.015 | 0.022 | -0.029 | 0.059 | 0.496 | ||
| Penalized robust MR-Egger intercept | 0.021 | 0.033 | -0.044 | 0.087 | 0.521 | ||
| Robust adjusted profile score | 0.032 | 0.036 | |||||
a Single nucleotide polymorphisms with genome-wide significance (P < 5 × 10–8) were used as genetic predictors.
b SE Standard Error
MR analysis for genetic associations between glutamate and prostate and breast cancersa
| Outcome | MR method | Association | |||
|---|---|---|---|---|---|
| Estimate | 95% CI (Down) | 95% CI (Down) | |||
| Prostate Cancer | IVW | 0.029 | -0.053 | 0.110 | 0.490 |
| Prostate Cancer | Robust adjusted profile score | 0.029 | 0.506 | ||
| Breast Cancer | IVW | 0.041 | -0.020 | 0.102 | 0.186 |
| Breast Cancer | Robust adjusted profile score | 0.041 | 0.215 | ||
a Single nucleotide polymorphisms with genome-wide significance (P < 5 × 10–8) were used as genetic predictors