Literature DB >> 35291392

Joint Image and Label Self-Super-Resolution.

Samuel W Remedios1, Shuo Han2, Blake E Dewey3, Dzung L Pham4, Jerry L Prince3, Aaron Carass3.   

Abstract

We propose a method to jointly super-resolve an anisotropic image volume along with its corresponding voxel labels without external training data. Our method is inspired by internally trained superresolution, or self-super-resolution (SSR) techniques that target anisotropic, low-resolution (LR) magnetic resonance (MR) images. While resulting images from such methods are quite useful, their corresponding LR labels-derived from either automatic algorithms or human raters-are no longer in correspondence with the super-resolved volume. To address this, we develop an SSR deep network that takes both an anisotropic LR MR image and its corresponding LR labels as input and produces both a super-resolved MR image and its super-resolved labels as output. We evaluated our method with 50 T 1-weighted brain MR images 4× down-sampled with 10 automatically generated labels. In comparison to other methods, our method had superior Dice across all labels and competitive metrics on the MR image. Our approach is the first reported method for SSR of paired anisotropic image and label volumes.

Entities:  

Keywords:  MRI; segmentation; super-resolution

Year:  2021        PMID: 35291392      PMCID: PMC8919863          DOI: 10.1007/978-3-030-87592-3_2

Source DB:  PubMed          Journal:  Simul Synth Med Imaging


  10 in total

Review 1.  Current methods in medical image segmentation.

Authors:  D L Pham; C Xu; J L Prince
Journal:  Annu Rev Biomed Eng       Date:  2000       Impact factor: 9.590

2.  Removing Camera Shake via Weighted Fourier Burst Accumulation.

Authors:  Mauricio Delbracio; Guillermo Sapiro
Journal:  IEEE Trans Image Process       Date:  2015-06-09       Impact factor: 10.856

3.  Self Super-resolution for Magnetic Resonance Images.

Authors:  Amod Jog; Aaron Carass; Jerry L Prince
Journal:  Med Image Comput Comput Assist Interv       Date:  2016-10-02

4.  SegSRGAN: Super-resolution and segmentation using generative adversarial networks - Application to neonatal brain MRI.

Authors:  Quentin Delannoy; Chi-Hieu Pham; Clément Cazorla; Carlos Tor-Díez; Guillaume Dollé; Hélène Meunier; Nathalie Bednarek; Ronan Fablet; Nicolas Passat; François Rousseau
Journal:  Comput Biol Med       Date:  2020-04-11       Impact factor: 4.589

5.  UNet++: A Nested U-Net Architecture for Medical Image Segmentation.

Authors:  Zongwei Zhou; Md Mahfuzur Rahman Siddiquee; Nima Tajbakhsh; Jianming Liang
Journal:  Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018)       Date:  2018-09-20

6.  3D whole brain segmentation using spatially localized atlas network tiles.

Authors:  Yuankai Huo; Zhoubing Xu; Yunxi Xiong; Katherine Aboud; Prasanna Parvathaneni; Shunxing Bao; Camilo Bermudez; Susan M Resnick; Laurie E Cutting; Bennett A Landman
Journal:  Neuroimage       Date:  2019-03-23       Impact factor: 6.556

7.  Deep Learning Single-Frame and Multiframe Super-Resolution for Cardiac MRI.

Authors:  Evan M Masutani; Naeim Bahrami; Albert Hsiao
Journal:  Radiology       Date:  2020-04-14       Impact factor: 11.105

8.  Super-resolution musculoskeletal MRI using deep learning.

Authors:  Akshay S Chaudhari; Zhongnan Fang; Feliks Kogan; Jeff Wood; Kathryn J Stevens; Eric K Gibbons; Jin Hyung Lee; Garry E Gold; Brian A Hargreaves
Journal:  Magn Reson Med       Date:  2018-03-26       Impact factor: 4.668

9.  Structured layer surface segmentation for retina OCT using fully convolutional regression networks.

Authors:  Yufan He; Aaron Carass; Yihao Liu; Bruno M Jedynak; Sharon D Solomon; Shiv Saidha; Peter A Calabresi; Jerry L Prince
Journal:  Med Image Anal       Date:  2020-10-14       Impact factor: 8.545

10.  SMORE: A Self-Supervised Anti-Aliasing and Super-Resolution Algorithm for MRI Using Deep Learning.

Authors:  Can Zhao; Blake E Dewey; Dzung L Pham; Peter A Calabresi; Daniel S Reich; Jerry L Prince
Journal:  IEEE Trans Med Imaging       Date:  2021-03-02       Impact factor: 10.048

  10 in total

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