César Leroy1, Thomas-Xavier Métro2, Ivan Hung3, Zhehong Gan3, Christel Gervais4, Danielle Laurencin1. 1. ICGM, Univ Montpellier, CNRS, ENSCM, 34293 Montpellier, France. 2. IBMM, Univ Montpellier, CNRS, ENSCM, 34293 Montpellier, France. 3. National High Magnetic Laboratory (NHMFL), Tallahassee, Florida 32310-3706, United States. 4. Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR 7574, Sorbonne Université, CNRS, F-75005 Paris, France.
Abstract
The description of the formation, structure, and reactivity of coordination networks and metal-organic frameworks (MOFs) remains a real challenge in a number of cases. This is notably true for compounds composed of Zn2+ ions and terephthalate ligands (benzene-1,4-dicarboxylate, BDC) because of the difficulties in isolating them as pure phases and/or because of the presence of structural defects. Here, using mechanochemistry in combination with operando Raman spectroscopy, the observation of the formation of various zinc terephthalate compounds was rendered possible, allowing the distinction and isolation of three intermediates during the ball-milling synthesis of Zn3(OH)4(BDC). An "NMR crystallography" approach was then used, combining solid-state NMR (1H, 13C, and 17O) and density functional theory (DFT) calculations to refine the poorly described crystallographic structures of these phases. Particularly noteworthy are the high-resolution 17O NMR analyses, which were made possible in a highly efficient and cost-effective way, thanks to the selective 17O-enrichment of either hydroxyl or terephthalate groups by ball-milling. This allowed the presence of defect sites to be identified for the first time in one of the phases, and the nature of the H-bonding network of the hydroxyls to be established in another. Lastly, the possibility of using deuterated precursors (e.g., D2O and d 4-BDC) during ball-milling is also introduced as a means for observing specific transformations during operando Raman spectroscopy studies, which would not have been possible with hydrogenated equivalents. Overall, the synthetic and spectroscopic approaches developed herein are expected to push forward the understanding of the structure and reactivity of other complex coordination networks and MOFs.
The description of the formation, structure, and reactivity of coordination networks and metal-organic frameworks (MOFs) remains a real challenge in a number of cases. This is notably true for compounds composed of Zn2+ ions and terephthalate ligands (benzene-1,4-dicarboxylate, BDC) because of the difficulties in isolating them as pure phases and/or because of the presence of structural defects. Here, using mechanochemistry in combination with operando Raman spectroscopy, the observation of the formation of various zinc terephthalate compounds was rendered possible, allowing the distinction and isolation of three intermediates during the ball-milling synthesis of Zn3(OH)4(BDC). An "NMR crystallography" approach was then used, combining solid-state NMR (1H, 13C, and 17O) and density functional theory (DFT) calculations to refine the poorly described crystallographic structures of these phases. Particularly noteworthy are the high-resolution 17O NMR analyses, which were made possible in a highly efficient and cost-effective way, thanks to the selective 17O-enrichment of either hydroxyl or terephthalate groups by ball-milling. This allowed the presence of defect sites to be identified for the first time in one of the phases, and the nature of the H-bonding network of the hydroxyls to be established in another. Lastly, the possibility of using deuterated precursors (e.g., D2O and d 4-BDC) during ball-milling is also introduced as a means for observing specific transformations during operando Raman spectroscopy studies, which would not have been possible with hydrogenated equivalents. Overall, the synthetic and spectroscopic approaches developed herein are expected to push forward the understanding of the structure and reactivity of other complex coordination networks and MOFs.
In recent years, the
use of mechanochemistry in material synthesis
has undergone an exponential development. Ball-milling (BM) syntheses
have notably proved to be of great interest in pharmaceutical materials
screening, battery development, or even catalysis.[1,2] More
than offering a drastic reduction of bulk-solvent use in the syntheses,
it offers a precise control over the stoichiometry of the reaction,
as well as simple and straightforward synthetic procedures.[3,4] However, because of the closed environment of mechanochemical reactions
(especially when conducted in stainless steel jars), these syntheses
are still considered as “black boxes”. In this context,
the last decade has seen the emergence of in situ time-resolved analysis techniques applied to BM syntheses, which
allow the evolution of the reaction medium to be monitored without
needing to interrupt the milling process and open the jar. Among them,
two are of particular interest: powder X-ray diffraction (pXRD) and
Raman spectroscopy.[5−11] While the first requires the use of a synchrotron beamline, the
second can be set up in standard laboratories thanks to bench-top
Raman spectrometers and probes. Such systems permit reaction rates
to be followed, complex reaction schemes to be understood, and can
also shed light on the appearance of yet unknown/unobserved reaction
intermediates.[12,13] Furthermore, these experimental
installations can also be coupled with thermal imaging cameras to
have an even more precise description of the course of the chemical
reactions.[14,15] It is worth mentioning that meticulous
kinetic studies from operando Raman spectroscopy
experiments have been recently proposed.[16,17]Metal–organic frameworks (MOFs) represent a major family
of porous materials, with porosities that can exceed 50% of their
volume. The impressive range of their applications extends from fuel/gas
storage to catalysis or even cancer therapy.[18−20] Various synthetic
routes have been developed for obtaining and/or shaping these materials,
like solvothermal or microwave syntheses, and also mechanochemistry.[21−24] The numerous properties of MOFs being strongly and directly related
to their crystallographic structures, it is then of primary importance
to precisely control their synthesis to obtain pure phases through
meticulous and reproducible procedures.[25] In this context, in situ monitoring experiments
can help observe or even trap interesting intermediates. For example,
recently, Jones et al. presented the use of in situ1H liquid-state NMR for observing the formation of a
Ni-MOF.[26] Insights into the nucleation
and crystal growth processes of this MOF were obtained through the
kinetic studies carried out at different temperatures. Concerning
MOFs formed by mechanosynthesis, a recent example by Karadeniz et
al. revealed the interplay between MOF-525 and its polymorph PCN-223,
two porphyrinic zirconium MOFs. In their case, in situ pXRD monitoring allowed the MOF-525 to be detected as an intermediate
during the formation of PCN-223, depending on the synthetic conditions
used.[27] A similar experimental procedure
also allowed the presence of metastable MOFs in the formation of dia-Zn(MeIm)2 (MeIm: 2-methylimidazole) to be
demonstrated.[6]Among MOFs, those
based on zinc (Zn-MOFs) have been the focus of
much interest because of their high porosity and/or interesting applications.
In particular, because zinc is a biocompatible metal, zinc-containing
materials such as the porous scaffold Zn-xWE43 (WE43 being a Mg alloy)
or the Zn2(BDC)2(diazabicyclooctane) MOF (with
BDC standing for 1,4-benzenedicarboxylate) have been studied as candidates
for implants and drug delivery.[28,29] Furthermore, Zn-MOFs
have shown great potential for applications as catalysts, anodes for
lithium batteries, or materials for uranium adsorption/detection.[30−32] Among the numerous Zn-MOFs described to date, coordination complexes
based on Zn2+-dicarboxylate motifs have been found to exist
as a very broad diversity of structures.[33] For instance, the well-known structure of MOF-5 (Zn4O(BDC)3) exhibits 4-fold-coordinated zinc sites with bridging carboxylate
functions, while MOF2 (Zn2(BDC)2) presents one
5-fold-coordinated zinc ion with four bridging oxygens from carboxylate
ligands and one additional coordinated water molecule.[34,35] Interconversion between these two structures has also been demonstrated
in specific synthetic conditions (high pressure, temperatures up to
120 °C).[36] Furthermore, the different
investigations performed so far on coordination networks involving
Zn2+ ions and terephthalate ligands (noted Zn-BDC from
hereon) have enabled many other structures to be described, e.g., Zn(BDC)(H2O),[37] Zn3(OH)4(BDC)·6H2O,[38] and (Zn3(BDC)4·4H2O),[39] just to name a few. Here, we decided to focus
our attention on four other Zn-BDC structures: a dihydrated zinc terephthalate
coordination polymer, Zn(BDC)(H2O)2,[40] and three lamellar phases involving terephthalate
and hydroxyl ligands (see Table ).
Table 1
Zn-BDC Compounds Studied in This Contribution,
Together with Structural Details, as Initially Reported in the Corresponding
Refs (41−44)
The Zn(BDC)(H2O)2 phase (noted here ZTA1) consists
of a “zig-zag” arrangement of
chains formed by distorted tetrahedral zinc environments, in which
each Zn2+ ion is linked to two monodentate BDC ligands
and two water molecules (Table ). Regarding the three lamellar structures, two are polymorphs
of general formula Zn2(OH)2(BDC) (noted here
as ZTA2a and ZTA2b). The structure of the
latter polymorph (ZTA2b) has been more thoroughly described
so far:[43] it exhibits only one penta-coordinated
zinc environment, with well-ordered π-stacked BDC units. The
structure of the other polymorph (ZTA2a), a contrario, reveals more uncertainties. In fact, although several articles
have reported the presence of this phase (by looking at pXRD data),
no consensus has been found in the literature about its structure.
Rodríguez et al. attributed this compound to a distorted MOF-5 phase caused by a default in
one of the binding modes of carboxylate groups to Zn2+.[45] Thirumurugan and Rao observed this phase as
an intermediate in their hydrothermal reactions when using a Zn/BDC
1/1 molar ratio but were not able to propose an exact formula for
it.[46] Hirai et al. were unable to isolate
a pure phase of this material but were able to detect it in a microwave
synthesis when using a Zn/BDC ratio of 2/1 and working at specific
pH (between 5.7 and 4.9).[38] In 2016, a
crystal structure was reported in the Cambridge crystallography database
(CCDC ECATIO), which matches the pXRD pattern of this same phase and
corresponds to the Zn2(OH)2(BDC) chemical formula
(with a Zn/BDC ratio of 2/1). Unfortunately, no information on its
synthesis could be found.[42] When looking
at the crystallographic file, it appears that it corresponds to a
lamellar structure with two distinct zinc sites in octahedral geometry,
which are separated by one bridging oxygen belonging to a hydroxyl
(Table ). Between
two layers, the BDC ligands exhibit a “zig-zag” configuration
of the aromatic rings. Hence, both polymorphs differ by subtle modifications
of the BDC arrangements, resulting in different coordination modes
of the metal centers, and the ZTA2a phase displays a
slightly smaller interlamellar spacing than ZTA2b (about
10.1 vs 10.8 Å, respectively) (see Table ). Lastly, the fourth
phase of interest in this work is Zn3(OH)4(BDC)
(noted ZTA3).[44] This other
lamellar Zn-hydroxide terephthalate is formed in a 3/1 Zn/BDC stoichiometry.
Three distinct zinc environments were found to be present in the Zn–O
polyhedra layers (with tetra/penta/hexacoordination, according to
the initially reported crystallographic file), which are connected
to each other through terephthalate and hydroxyl anions.Diffraction
techniques remain, at the moment, the most common analytical
tool to obtain structural information on Zn-BDC MOFs. However, preparing
good-quality crystals can be very challenging. Moreover, providing
exact positions for hydrogen atoms from pXRD data remains an issue,
and only two out of the four reported structures in Table fully report hydrogen positions
(aromatics and hydroxyls/water). In complement to XRD, chemical and
structural information on these phases can also be obtained through
FTIR spectroscopy. For example, the O–H stretching modes of
hydroxyls and water molecules are easily observed above 3000 cm–1 and can inform on the H-bond networks in presence.
Moreover, the C–O stretching modes of the carboxylate groups
are identified by the presence of antisymmetric and symmetric vibrations
(noted νas(COO–) and νs(COO–)) between 1650–1540 and 1450–1360
cm–1, respectively, and information on the binding
mode of the carboxylate ligands to zinc metal centers can a priori be proposed on the basis of the difference in wavenumbers
between these two frequencies (Δ = νas(COO–) – νs(COO–)).[47,48] However, very few articles have used solid-state
NMR (ssNMR) techniques to probe the local environment of the atoms
in Zn-BDC structures, even for some of the more readily observable
isotopes such as 1H and 13C.[37,49−51] This can be seen as surprising considering that the
use of ssNMR alongside XRD analyses is more and more frequent to
elucidate the structure of MOFs and coordination polymers, including
phases prepared using mechanochemistry,[52−54] such as MOF crystal-glass
composites (MIL-53/ZIF-62),[55] cadmium-imidazole
ZIFs,[54] or even paramagnetic MOFs (e.g. Ni(II)-MOF-74, bimetallic ZnCu-MOF-74).[56,57] More generally speaking, such techniques could help numerous debates,
some of which will be discussed more extensively later in this contribution,
which still remain about such zinc structures and their intermediates.To further elucidate the details of the structure of these phases, 17O ssNMR is a very attractive tool. Oxygen-17 is a spin-5/2
quadrupolar nucleus of low natural abundance (0.04%), which presents
a very wide chemical shift range (exceeding 1000 ppm) and also a very
wide variation of quadrupolar interaction (QI) parameters (CQ, ηQ). Moreover, recent investigations
have shown that 17O ssNMR spectroscopy can be of high interest
for studying the structure of coordination polymers and MOFs.[58−61] For example, Martins et al. have shown the powerful use of ultra-high-field 17O ssNMR experiments (35.2 T) applied on 17O-enriched
Mg and Al MOFs (α-Mg3(HCOO)6 and MIL-53(Al)).
Impressively, they were able to distinguish up to 12 inequivalent
oxygen sites for as-made and activated phases of α-Mg3(HCOO)6.[62] While 17O ssNMR is still not routinely used to investigate the structure
of MOFs, our recent developments of cost-efficient 17O-labeling
schemes using mechanochemistry,[60,63,64] including for carboxylic ligands like terephthalic acid,[65] imply that such nonroutine NMR now become conceivable
for studying Zn-BDC structures like those in Table .In this contribution, we report a
detailed investigation of the
structure and interconversion between the four aforementioned Zn-BDC
systems (ZTA1, ZTA2a, ZTA2b, and ZTA3) synthesized using mechanochemistry. We first
show how by modifying the initial stoichiometry of the reaction, and
carefully monitoring the course of the BM reactions using operando Raman spectroscopy and thermal analysis of the
milling jar, each of these different phases can be easily isolated
in a pure form and subsequently studied by ex situ methods (FTIR, powder X-ray diffraction, multinuclear ssNMR), allowing
further information about their structures to be gained. Moreover,
we then demonstrate for the first time how, by using this synthetic
methodology, it becomes possible to perform selective 17O isotopic labeling of the different types of oxygen environments
in such MOF structures (by enriching either the water/hydroxyl ligands
or the carboxylate ones), thereby opening the way to a level of structural
insight, which had not been achieved before. Lastly, we show how the
combination of high-resolution 17O NMR analysis of these
compounds and ab initio calculations of NMR parameters
using the gauge-including projector-augmented wave method (GIPAW)
can improve and/or correct the structural models of these phases,
thereby paving the way to other investigations on the structure/property
relationships in complex coordination networks and MOFs.
Materials and Methods
Reagents
The following commercial
precursors were used
as received without further purification: terephthalic acid (C8H6O4, Janssen Chemicals, 98% purity,
noted here H2BDC), deuterated terephthalic acid (C8D4H2O4, with deuteration
on the aromatic H positions only, Cambridge Isotope Laboratories,
98% purity, noted here d4-BDC), ZnO (particle
size < 5 μm, Sigma-Aldrich, 99.9% purity), and D2O (Sigma-Aldrich, 99.9% purity).17O-labeled water (with
∼40, 70, or ∼90% 17O-enrichment) was purchased
from CortecNet.17O-enriched H2BDC was
prepared using two different mixer mills: either a vibratory mixer
mill (Restch MM400 apparatus, as published elsewhere)[65] or by scaling-up the procedure using a planetary ball mill
(Fritsch P7 apparatus), as described below.
H2BDC-Enrichment
in a Planetary Mixer Mill (Fritsch
P7)
H2BDC (330 mg, 1.98 mmol, 1.0 equiv) and CDI
(708.6 mg, 4.37 mmol, 2.2 equiv) were introduced into the stainless
steel grinding jar (20 mL inner volume), to which 80 stainless steel
beads (5 mm diameter) were then added. The jar was closed and subjected
to grinding for two cycles of 10 min at 500 rpm, with a break of 30
min between each cycle in the P7 planetary ball mill. 17O-labeled (91.5%, 106 μL, 5.96 mmol, 3.0 equiv) water was then
added into the jar, and the mixture was subjected to further grinding
for two cycles of 10 min at 500 rpm, with a break of 30 min between
each cycle. To help recover the product, nonlabeled water (2 mL) was
added into the jar, and the content was subjected to grinding for
1 min at 500 rpm. Then, the suspension was transferred to a beaker
(together with 9 mL of nonlabeled water used here to rinse the jar).
The medium was acidified under stirring to pH ∼ 1 with an aqueous
solution of HCl (6 M, 44 drops). The white precipitate was immediately
filtered on a glass frit, washed (3 × 2 mL of 1 M HCl and then
3 × 2 mL of ultra-pure water), and then dried under vacuum. Yield:
312.7 mg (∼95%). Enrichment yield: 84%, enrichment level: 38.7%,
as determined by the MS.
Mechanochemical Syntheses
of Zn-BDC Networks
The Fritsch
Pulverisette-23 (P23) vertical mixer mill was used in all reactions.
BM syntheses were conducted in 10 mL inner-volume Perspex jars,[7] with two 10 mm diameter zirconia beads.A typical mechanochemical synthesis was performed as follows. First,
ZnO was introduced into a Perspex jar followed by H2BDC
(see Table for exact
masses). Both powders were gently mixed with a spatula before adding
the two zirconia beads. Then, the appropriate amount of water was
added. The jar was quickly closed, and parafilm was added to cover
the junction of top/bottom parts of the jar to avoid any leaks as
well as to increase air/water tightness. The system was then subjected
to grinding for milling times ranging from 5 to 90 min in the P23
mixer mill operating at 30 or 50 Hz. The reactor was then opened,
and the resulting compound was left to dry in air for several hours.
The solid powder was subsequently recovered by scraping the edges
of the reactor and beads with a spatula. All samples were obtained
as white powders. After several uses, reactors can exhibit signs of
erosion; however, no trace of Perspex was detected in the final compounds
by 13C ssNMR and ex situ Raman spectroscopy.
Table 2
Synthetic Details for BM Experiments
of Zn-BDC Compoundsa
milling parameters
code name
formula
mZnO (mg)
mH2BDC (mg)
VH2O (μL)
frequency
(Hz)
duration
(min)
ZTA1
Zn(BDC)(H2O)2
129.9
265.1
115
30
30
1.59 mmol
1.59 mmol
6.38 mmol
1 equiv
1 equiv
4 equiv
ZTA2a
Zn2(OH)2(BDC)
178.4
182.1
40
50
20
2.19 mmol
1.09 mmol
2.22 mmol
2 equiv
1 equiv
2 equiv
ZTA2b
Zn2(OH)2(BDC)
197.8
201.9
350
50
90
2.43 mmol
1.21 mmol
19.43 mmol
2 equiv
1 equiv
16 equiv
ZTA3
Zn3(OH)4(BDC)
262.1
178.4
310
50
90
3.22 mmol
1.07 mmol
17.21 mmol
3 equiv
1 equiv
16 equiv
17O-Labeled Compounds
ZTA1-*BDC
Zn(BDC)(H2O)2
34.0
71.0*
17
50
5
0.42 mmol
0.42 mmol
0.94 mmol
1 equiv
1 equiv
2 equiv
ZTA2a-*BDC
Zn2(OH)2(BDC)
60.9
63.6*
15
50
12
0.75 mmol
0.37 mmol
0.83 mmol
2 equiv
1 equiv
2 equiv
ZTA2a-*OH
178.4
182.1
40*
50
20
2.19 mmol
1.10 mmol
2.20 mmol
2 equiv
1 equiv
2 equiv
ZTA2b-*OH
Zn2(OH)2(BDC)
171.2
174.7
40*
50
90
2.10 mmol
1.05 mmol
2.20 mmol
2 equiv
1 equiv
2 equiv
ZTA3-*BDC
Zn3(OH)4(BDC)
121.1
84.3*
50
50
90
1.49 mmol
0.49 mmol
2.77 mmol
3 equiv
1 equiv
5 equiv
ZTA3-*OH
119.6
81.4
50*
1.47 mmol
0.48 mmol
2.77 mmol
3 equiv
1 equiv
5 equiv
Deuterated
Compounds
ZTA1-d4BDC
Zn(d4BDC)(H2O)2
125.0
262.0d
315
30
15
1.54 mmol
1.54 mmol
17.48 mmol
1 equiv
1 equiv
11.2 equiv
ZTA2a-d4BDC
Zn2(OH)2(d4BDC)
197.4
207.5d
350
50
90
2.42 mmol
1.22 mmol
19.43 mmol
2 equiv
1 equiv
16 equiv
ZTA2b-OD
Zn2(OD)2(BDC)
188.1
192.8
335d
50
90
2.31 mmol
1.16 mmol
18.47 mmol
2 equiv
1 equiv
16 equiv
ZTA3-d4BDC
Zn3(OH)4(d4BDC)
242.0
168.7d
90
50
90
2.97 mmol
0.99 mmol
5.00 mmol
3 equiv
1 equiv
5 equiv
ZTA3-OD
Zn3(OD)4(BDC)
250.7
171.1
350d
3.08 mmol
1.03 mmol
19.06 mmol
3 equiv
1 equiv
19 equiv
“*”
is used for 17O-labeled materials and “d”
is used for deuterated
materials (prepared from D2O or d4-BDC precursors).
“*”
is used for 17O-labeled materials and “d”
is used for deuterated
materials (prepared from D2O or d4-BDC precursors).Further details on the amounts of reagents and milling conditions
used to isolate each of the four phases, in their nonlabeled, 17O-labeled, or deuterated forms, are provided in Table . It is worth noting
that for the synthesis of 17O-labeled compounds, amounts
of reagents were reduced to further decrease the cost of obtaining
an enriched material for ssNMR analyses.
“Routine”
Characterizations of the Different Phases
Powder XRD analyses
were performed on an X’Pert MPD diffractometer
using Cu Kα1 radiation (λ = 1.5406 Å),
with the operation voltage and current maintained at 40 kV and 25
mA, respectively. Diffractograms were recorded between 2θ =
5 and 50° in the Bragg–Brentano configuration, with a
step size of 0.050° and a time per step of 60 s.Infrared
(IR) spectra were recorded on a Perkin Elmer Spectrum 2 FTIR spectrometer,
using the ATR measurement mode (4000–400 cm–1 range, four repetitions).
Operando Raman Spectroscopy
and Thermal Analysis
In this manuscript, we use the term operando to
insist on the fact that spectroscopic measurements were acquired during
the milling (and without stopping the milling), as opposed to in situ analyses, which can be performed on a medium when
the milling is stopped for a few seconds/minutes.[66]The Raman measurements were performed with a WP 785
ER Raman spectrometer (Wasatch Photonics) using an IPS (Innovative
Photonic Solutions) laser source (working at ∼300 mW, wavelength
of λ = 785 nm) and a contactless probe head (the probe’s
focal length is 11 mm for a 1 mm diameter spot). The positioning of
the Raman probe was optimized such that the focus of the laser was
localized at the inner jar wall. A laser exposure time of 5 s with
five accumulations was chosen, and spectrum collection was repeated
every 30 s during the milling time. Raman spectra were collected across
a range from 220 to 3120 cm–1, and a dark spectrum
(laser OFF) was also recorded before starting the experiment and directly
subtracted from the recorded spectra. No degradation of the jar and/or
the compound by the laser was observed during the operando Raman experiments. The thermal imaging camera showed that during
the milling, the laser beam did not prompt any additional heat around
its focal point on the Perspex jar walls (compared to the jar’s
overall temperature). Moreover, no noticeable degradation of the reagents
and products was observed under the operating conditions used here
for operando Raman analyses. The obtained Raman spectra
were processed with the OriginPro 2021 program. Baseline correction
(asymmetric least-squares smoothing) was first applied to each spectrum,
and then normalization of the signal of the Perspex jar (at 1728 cm–1 where no overlapping from reagents nor product is
expected) was performed, prior to the subtraction of the signal of
the vibrating empty jar (see Supporting Information Figure S1). The reproducibility of the kinetic measurements
performed is illustrated in Figure S2.Temperature measurements were carried out using an OPTRIS PI450i
thermal imaging camera. The optical resolution of the device is 382
× 380 pixels. The temperature accuracy measured using this system
is estimated to be about ±2 °C. Four different temperatures
were recorded every 2 s during the milling, focusing on three to four
different areas, corresponding to the top, center, and bottom of the
jar, and also to the “hot spot” at each time point.Cautionary remarks: the laser source used here
is designed as a class IV during all procedures of operation, maintenance,
and service, meaning that safety measures must be taken accordingly.
The use of laser-specific safety goggles is required when operating
this laser, as failure to wear appropriate eye protection may result
in permanent eye damage. Caution must be taken to never look directly
into the laser beam and make sure the laser direction points toward
the wall. The power range for the laser is 0–580 mW. Measurements
presented in this contribution were performed at ∼300 mW in
a dedicated isolated dark room with proper safety signs on the door,
and operators received specific security training before using this
equipment.
Solid-State NMR
1H ssNMR
1H ssNMR experiments
were performed on a Varian VNMRS 600 MHz (14.1 T) NMR spectrometer,
using a Varian 3.2 mm probe tuned to 1H (599.82 MHz). Spectra
were recorded under magic angle spinning (MAS) conditions, with a
spinning speed of 16 kHz and under a regulated airflow (0 °C).
A 1H direct excitation pulse of 3.3 μs was used.
Recycle delays used for the Zn-BDC compounds were 4 and 15 s for pure
H2BDC. Additional 1H MAS NMR experiments were
performed on a Bruker Avance NEO 850 MHz (20.0 T) NMR spectrometer,
using a Bruker 1.3 mm probe, tuned to 1H (850.23 MHz),
with a spinning speed of 60 kHz. Adamantane was used as a secondary
reference for setting 1H chemical shifts (δiso = 1.8 ppm with respect to tetramethylsilane).
13C ssNMR
13C ssNMR experiments
were performed on a VNMRS 600 MHz (14.1 T) NMR spectrometer, using
a Varian 3.2 mm HX probe tuned to 1H (599.82 MHz) and 13C (150.81 MHz). All one-dimensional (1D) 13C NMR
spectra consist of cross-polarization experiments (CP) under MAS conditions,
with spinning frequencies from 4 to 15 kHz. A 1H excitation
pulse of 3.3 μs was used prior to a ramped spin-lock pulse of
5 ms contact time. Acquisition was performed under spinal-64 1H-decoupling (∼75 kHz RF). Recycle delays used for
the Zn-BDC compounds were 4 and 15 s for pure H2BDC. 13C chemical shifts were referenced to adamantane used as a
secondary reference (high-frequency peak at 38.5 ppm with respect
to tetramethylsilane).
17O ssNMR
17O ssNMR experiments
were first performed on all samples on a Varian VNMRS 600 MHz (14.1
T) NMR spectrometer, using either Varian 3.2 mm HX or HXY probes,
or a Phoenix 3.2 mm probe, tuned to 1H (599.82 MHz) and 17O (81.31 MHz). Spectra were recorded under MAS conditions
under a regulated airflow (0 °C), with spinning speeds ranging
from 16 to 20 kHz, depending on the sample. Additional 17O MAS NMR experiments were performed at lower field on a VNMRS 400
MHz (9.4 T) NMR spectrometer, using a Varian 3.2 mm HXY probe tuned
to 1H (399.92 MHz) and 17O (54.21 MHz). Moreover,
higher-field 17O NMR analyses were performed first on a
Bruker Avance NEO 850 MHz (20.0 T) NMR spectrometer, using Bruker
1.3 or 4 mm probes tuned to 1H (850.23 MHz) and 17O (115.26 MHz) or on a Bruker Avance III HD 800 MHz (18.8 T) NMR
spectrometer using a 3.2 mm Low-E probe spinning at 16 kHz (νL(1H) = 800.12 MHz and νL(17O) = 108.47 MHz) to perform multimagnetic field data fitting
(see Supporting Information Figures S14–S17). A double frequency sweep (DFS) excitation scheme was used consisting
of a 1 ms pulse with a sweep between 1 MHz and 50 kHz[67−69] for 17O-signal enhancement (when possible) prior to the
excitation pulse, and spinal-64 1H-decoupling was applied
during acquisition. The acquisition parameters used for each sample
(including number of scans and recycle delay D1) can be found in Table . The D-HMQC (dipolar-heteronuclear
multiple-quantum coherence) sequence used an SR412 recoupling scheme on the 1H channel with a radio-frequency
field of twice the spinning speed; the detection is performed on the 17O channel.[70]17O chemical
shifts were referenced externally to D2O at −2.7
ppm (or tap water at 0.0 ppm).
Table 3
Main Acquisition
Parameters for 17O NMR Experiments
sample
field (T)
Ørotor (mm)
expt
νrot (kHz)
D1 (s)
NS (/#t1)
νRF (kHz)
pulses (μs)
dec {1H} (kHz)
ZTA1-*BDC
14.1
3.2
DFS-One pulse
18
2
1024
∼40
2
75
20.0
3.2
DFS-One pulse
14.286
4
256
10
8.33
60
ZTA2a-*BDC
9.4
3.2
DFS-One pulse
18
1
20480
∼40
2
50
14.1
3.2
DFS-One pulse
18
1
6144
∼40
2
75
18.8
3.2
MQMAS
16
5
768/22
∼16
3/1/5
62.5
20.0
4
DFS-One pulse
14.286
1
4096
10
8.33
60
ZTA2a-*OH
9.4
3.2
DFS-One pulse
18
2
512
∼40
2
50
14.1
3.2
DFS-One pulse
18
2
3072
∼40
2
75
20.0
4
DFS-One pulse
14.286
2
256
10
8.33
60
ZTA2b-*OH
9.4
3.2
DFS-One pulse
18
4
3072
∼40
2
50
14.1
3.2
DFS-One pulse
18
4
1024
∼40
2
75
20.0
4
DFS-One pulse
14.286
4
512
10
8.33
60
ZTA3-*BDC
9.4
3.2
DFS-One pulse
18
2
6144
∼40
2
50
14.1
3.2
DFS-One pulse
18
2
12288
∼40
2
75
18.8
3.2
MQMAS
16
5
768/32
∼16
3/1/5
62.5
20.0
4
DFS-One pulse
14.286
2
1024
10
8.33
60
1.3
(DFS) D-HMQC
60
4
9216/24
20
4.167/8.33
75
ZTA3-*OH
9.4
3.2
DFS-One pulse
18
4
10240
∼40
2
50
14.1
3.2
DFS-One pulse
18
4
1024
∼40
2
75
18.8
3.2
MQMAS
16
5
480/32
∼16
3/1/5
62.5
20.0
4
DFS-One pulse
14.286
4
256
10
8.33
60
1.3
(DFS) D-HMQC
60
2
1536/23
20
4.167/8.33
75
The NMR parameters
were obtained by fitting the spectra using DMfit.[71]
NMR Conventions
In this article,
the “Herzfeld–Berger”
convention is used to describe the magnitude of the chemical shift
anisotropy (CSA) arising from the magnetic shielding interaction.[72] The isotropic chemical shift (δiso), span (Ω), and skew (κ) are given as followsThe principal components of the chemical shift
tensor are ordered as follows: δ11 ≥ δ22 ≥ δ33.The quadrupolar interaction
is described by two parameters, the quadrupolar coupling constant
(CQ) and the asymmetry parameter (ηQ)Here, V11, V22, and V33 are
the principal components of the traceless electric field gradient
(EFG) tensor, with |V33| ≥ |V22| ≥ |V11|, e is the fundamental electronic charge, Q is the nuclear quadrupole moment, and h is Planck’s constant.
GIPAW-DFT Calculations
The unit cell parameters were
set to the X-ray diffraction parameters and kept fixed during geometry
optimizations to ensure consistency between experimental and optimized
structures. Missing protons (in CCDC PUCYAO and PEKGAO structures)
were initially positioned to be consistent with the expected structure
of the system, and successively, only protons and then all atomic
positions were relaxed with the VASP (Vienna ab initio simulation
package) code[73] based on the Kohn–Sham
density functional theory (DFT) and using a plane-wave pseudopotential
approach. For the two structures mentioned above, several initial
OH proton positions were tested. The NMR parameters were then calculated
within the Kohn–Sham DFT using the QUANTUM-ESPRESSO code,[74,75] keeping the atomic positions equal to the values previously calculated
with VASP. The PBE generalized gradient approximation[76] was used, and the valence electrons were described by norm-conserving
pseudopotentials[77] in the Kleinman–Bylander
form.[78] The shielding tensor was computed
using the gauge-including projector-augmented wave (GIPAW) approach,[79] which enables the reproduction of the results
of a fully converged all-electron calculation.[80] The isotropic chemical shift δiso is defined
as δiso = −[σ – σref], where σ is the isotropic shielding and σ ref is the isotropic shielding of the same nucleus in a reference system.
For 1H, 13C, and 17O, previously
used referencing was adopted using glycine,[81] calcite,[82] and a series of silicates,[63] respectively. Diagonalization of the symmetrical
part of the calculated tensor then provides its principal components
σ11, σ22, and σ33 from which the chemical shift components δ11, δ22, and δ33 can be calculated. The principal
components V, V, and V of the electric field
gradient (EFG) tensor are obtained by diagonalization of the tensor.
The quadrupolar interaction can then be characterized by the quadrupolar
coupling constant CQ and the asymmetry
parameter ηQ, which are defined previously. The experimental
value of the quadrupole moment of 17O (Q = −25 × 10–30 m2) was used
to calculate CQ.[83]
Results and Discussion
Given the rich variety of structures
involving Zn2+ and
BDC ligands, in terms of Zn/BDC ratios, H2O or OH species
linked to the Zn2+, and also carboxylate coordination modes,
we decided to investigate the formation of these compounds using mechanochemistry,
a synthetic method that had not yet been tested in a systematic way
for these phases. The general idea was to see if conditions allowing
each of these phases to be isolated in a pure form and high yield
could be achieved using mechanochemistry. Coupled with the use of 17O-enriched precursors, this approach would allow all of the
different forms of Zn-BDC phases to be analyzed with an unprecedented
level of detail, thereby providing novel information in the debate
related to the structures of these materials.
Formation and Isolation
of Zinc (Hydroxyl-) Terephthalate Coordination
Complexes
Observation of Several Intermediate Phases Using Operando Raman
Analyses
The three reagents, namely, H2BDC, ZnO,
and H2O, were introduced in a Perspex milling jar to enable
the monitoring of different vibration bands by Raman spectroscopy.
An illustrative example of the formation of various Zn-BDC phases
in a one-pot mechanochemistry synthesis is shown in Figure for a ZnO/H2BDC/H2O stoichiometry of 2/1/16. In Figure a, the evolution of the Raman signals during
the milling for two selected regions of the spectra is presented after
data processing (see the Materials and Methods Section for more information).
It is worth noting that water plays multiple roles in this system:
(i) it is directly involved in the reaction, as a reagent, by forming
complexes with the Zn2+ cations and in some cases leads
to the formation of coordinated hydroxyls, (ii) it plays the role
of a liquid-assisted grinding (LAG) agent, allowing a better mixing
of the solid reagents and thus a better efficiency of the milling
process,[84,85] (iii) it guarantees the formation of paste-like
materials during the milling, which will be homogeneously spread over
the inner surfaces of the milling jar. The latter point is of great
importance for the operando Raman measurements, justifying
the use of an excess amount of water in this particular example (≥16
equiv).
Figure 1
(a) Top: starting compounds used for the operando experiment with their respective equivalents and milling conditions.
Bottom: time-resolved operando Raman spectra of two
selected areas (gray and orange, see panel (b)): 820–900 cm–1 range on the left and 1380–1480 cm–1 range on the right (see Figure S2 for
repetitions of the analysis in this zone); two-dimensional (2D) plots
have been overlapped with spectra from panel (b). (b) Experimental ex situ Raman spectra of HBDC (in black), ZTA1 (in green), ZTA2a (in red), and ZTA2b (in blue) when isolated
under the milling conditions reported in Table . (c) Experimental ex situ pXRD diffractograms of the corresponding “pure” compounds
when isolated under the milling conditions reported in Table (in black), and comparisons
with the simulated pXRD data for these Zn-BDC phases (colored lines;
pXRD simulated from available CIF files in the CCDC database, as reported
in Table ).
(a) Top: starting compounds used for the operando experiment with their respective equivalents and milling conditions.
Bottom: time-resolved operando Raman spectra of two
selected areas (gray and orange, see panel (b)): 820–900 cm–1 range on the left and 1380–1480 cm–1 range on the right (see Figure S2 for
repetitions of the analysis in this zone); two-dimensional (2D) plots
have been overlapped with spectra from panel (b). (b) Experimental ex situ Raman spectra of HBDC (in black), ZTA1 (in green), ZTA2a (in red), and ZTA2b (in blue) when isolated
under the milling conditions reported in Table . (c) Experimental ex situ pXRD diffractograms of the corresponding “pure” compounds
when isolated under the milling conditions reported in Table (in black), and comparisons
with the simulated pXRD data for these Zn-BDC phases (colored lines;
pXRD simulated from available CIF files in the CCDC database, as reported
in Table ).The system undergoes several structural transformations
during
the milling process, as illustrated by the shifts of specific vibration
modes in the time-resolved experiment (Figure a). Between 800 and 900 cm–1 (Figure b, gray
box), we focus on the aromatic breathing and out-of-plane (γCH)
deformation region.[86−88] The signal from the starting H2BDC molecule
quickly shifts from 832 to 878 cm–1, and after ∼8
min of milling, it evolves to 862 cm–1, and finally
moves to 865 cm–1 in the final compound. Accordingly,
corresponding modifications of the νs(COO–) band can also be easily followed between 1380 and 1480 cm–1.The products successively formed were identified as ZTA1, ZTA2a, and ZTA2b. Their Raman
spectra
and corresponding pXRD patterns are presented in Figure b,c in green, red, and blue,
respectively. No formation of ZTA3 occurred when using
an initial Zn/BDC molar ratio of 2/1 in the milling.
Kinetic Study
of the Transformations
In view of describing
further the reactions occurring during the milling, the kinetic evolution
of the reaction medium established by Raman spectroscopy (as determined
by the integration of the previously mentioned vibration modes between
800 and 900 cm–1, for example) was complemented
with the thermal imaging of the milling jar (Figure ). Simultaneous recording of temperatures
at three different areas of the jar (referred to as top, center, and
bottom) led to the plots displayed in Figure b. The inset (dashed gray area in Figure a) presents the first
500 s of the experiment, corresponding to the transformation of H2BDC into ZTA1 (from 832 to 878 cm–1), which has a 1/1 Zn/BDC molar ratio.[40] This reaction is then followed by the introduction
of an additional Zn2+ center in the structure and the deprotonation
of two water molecules to form, after less than 8 min (<480 s)
of milling, the ZTA2a phase (with characteristic bands
at 862 and 1424 cm–1 in the two aforementioned regions),
which has a Zn/BDC ratio of 2/1 (red curve). The reaction is probably
exothermic, as shown by the increase of the temperature up to ∼40
°C (brown curve in Figure b). The final transformation observed in Figure a corresponds to the structural
modification of ZTA2a to form the polymorph ZTA2b (865 and 1449 cm–1), with a second increase of
the temperature up to ∼47 °C (for the center temperature).
Such temperature behaviors have been observed in various other systems
during milling syntheses.[14,89]Figure b exhibits, for comparison, the milling temperature
profile of a mixture of H2BDC (400 mg) and H2O (350 μL) (without ZnO but using similar milling conditions
as in Figure a), allowing
a difference of about 10 °C to be highlighted after ∼15
min of milling (and >15 °C after 1 h) between the Zn-BDC synthesis
and the control experiment (brown vs gray curves).
Figure 2
(a) Reaction
profiles corresponding to signals highlighted in Figure b. Empty symbols
(ZTA2a and ZTA2b at 1424 and 1449 cm–1, respectively) are shown only for the last half of
the milling time for clarity. The inset on the right-hand side corresponds
to a zoom of the first 500 s of the time-resolved Raman experiment.
(b) Temperature profiles of three different areas of the jar (top,
center, and bottom); the light gray curve corresponds to a control
experiment in which the temperature evolution caused by the milling
of pure H2BDC with H2O in the same experimental
conditions as in Figure a was followed. (c) Picture obtained with the thermal imaging camera
of the milling jar, highlighting the three measurement zones. The
shaking direction is emphasized by the orange arrows.
(a) Reaction
profiles corresponding to signals highlighted in Figure b. Empty symbols
(ZTA2a and ZTA2b at 1424 and 1449 cm–1, respectively) are shown only for the last half of
the milling time for clarity. The inset on the right-hand side corresponds
to a zoom of the first 500 s of the time-resolved Raman experiment.
(b) Temperature profiles of three different areas of the jar (top,
center, and bottom); the light gray curve corresponds to a control
experiment in which the temperature evolution caused by the milling
of pure H2BDC with H2O in the same experimental
conditions as in Figure a was followed. (c) Picture obtained with the thermal imaging camera
of the milling jar, highlighting the three measurement zones. The
shaking direction is emphasized by the orange arrows.The fact that the apparent proportion of ZTA2a is
not null at the end of the reaction in Figure a (despite that its resonances have disappeared
from the Raman data) can be explained by the way in which these kinetic
plots were fitted here in the 860 cm–1 region using
simple Gaussian signals centered at the different maximum frequencies
of the intermediates, with intensities that were then left to freely
evolve at each time point. This created ambiguities in the fitted
intensities due to the closely overlapping signals of ZTA2a and ZTA2b (only ∼3 cm–1 difference
in this spectral region). More accurate kinetic plots related to the
transformation of ZTA2a into ZTA2b could
be obtained by fitting the 1380–1480 cm–1 region, where the Raman resonances of the two phases are more distinctly
resolved. This is shown in Figure a, where the Raman signal from ZTA2a (red
empty circles) decreases close to 0% at the end of the reaction (in
line with pXRD analyses of the final compound). Because the purpose
of this manuscript was not to establish a full kinetic model of the
formation of these Zn-BDC phases, no attempt was made to further refine
or analyze this operando Raman data. Yet, it is worth
noting that this example illustrates the importance of having access
to different regions of the Raman spectra to evaluate the quality
of such kinetic fits and potentially resolve overlapping resonances.
Other possibilities along this line (e.g. with deuterated
precursors) will be discussed at the end of this article.In
the frame of this work, the clear identification of each transformation
thanks to the operando setup involving the combined
use of the Raman instrument and the thermal camera allowed each of
these structures to be isolated as a pure phase for further ex situ structural analyses (using the optimized reaction
conditions reported in Table ). Similarly to ZTA1, ZTA2a, and ZTA2b, the formation of ZTA3 could also be followed
in the same fashion by operando Raman spectroscopy
when starting from a 3/1 ratio between the ZnO and H2BDC
precursors. Hence, by choosing the adequate stoichiometry and by stopping
the milling at carefully selected times, the different Zn-BDC phases
could be isolated pure, without them changing with time (see Supporting
Information Figure S3). It then became
conceivable to refine their structures, especially the proton positions,
and to gain more insights into the terephthalate binding modes.
Refinement of the Zn-BDC Structures Using an “NMR Crystallography”
Approach
When the limits of XRD methods are reached, for
example, for phases that cannot be isolated as single crystals, in
which some atoms cannot be positioned (e.g. protons)
or which contain defects, ssNMR methods can be particularly useful
when used in conjunction with computational modeling to gain precise
information on the crystallographic structures. Such an approach,
referred to as “NMR crystallography”,[90,91] implies that the structures of interest possess NMR-active isotopes,
which can be readily analyzed by high-resolution NMR.In the
case of Zn-BDC structures, the vicinity of the Zn2+ cations
and more specifically the precise coordination modes of the BDC and
hydroxyl ligands to Zn2+ are of great importance. From
an NMR perspective, all atoms present in these phases have at least
one NMR-active isotope, which can be studied by NMR, making them potentially
attractive targets of analysis: 1H (I =
1/2, 100% natural abundance), 13C (I =
1/2, 1.07% natural abundance), 17O (I =
5/2, 0.04% natural abundance), and 67Zn (I = 5/2, 4.11% natural abundance). Even though 67Zn NMR
has recently shown promising results for providing a detailed description
of zinc local environments, it is still considered as very challenging[92] because of the quadrupolar nature of zinc-67
(which can lead to very broad lines)[93] and
its poor receptivity (low natural abundance and very low resonance
frequency (νL(67Zn) < 10% νL(1H))).[92,94] In the present work,
we thus set our focus on the other three nuclei (13C, 17O, and 1H) to reach a more detailed description
of the binding mode of the dicarboxylate ligands and for positioning
the H-atoms of the hydroxyls within the structures.
13C NMR Analyses of Carboxylate Binding Modes in
Zn-BDC Structures
As briefly explained earlier (vide
supra), IR spectroscopy has been used for decades as a first
approach for proposing binding modes of carboxylates to various metal
ions. The difference in wavenumbers between the antisymmetric and
symmetric stretching modes, defined by the parameter Δ (=νas(COO–) – νs(COO–)), has been shown to change depending on the binding
mode of carboxylates, allowing, as a first approximation, the following
tendency to be derived upon coordination to divalent metal ions: Δ(Chelating)
< Δ(Bridging) <
Δ(Ionic) < Δ(Monodentate) (see Figure a).[47] However,
this method can be ambiguous as Δ can be affected by other parameters,
depending on the types of ligands involved and how they interact with
each other within the structures. Moreover, it relies on the clear
attribution of the vibration modes (νas(COO–) and νs(COO–)), which actually
remains uncertain in many experimental cases, due to numerous overlapping
vibration bands (e.g., νas(COO–), νs(COO–), ν(CC),
β(CCH), etc.) on the IR spectra (see Supporting
Information Figure S4). In the present
case, when looking at the FTIR spectrum of ZTA2a, the
Δ = 210 cm–1 splitting is significantly higher
than expected for bridging ligands. Indeed, the other phases with
bridging ligands, namely, ZTA2b and ZTA3, display values at Δ = 171 and 180 cm–1,
respectively. Moreover, the monodentate bound ligand in ZTA1 shows a splitting of Δ = 192 cm–1. Overall,
this tends to show the limitations of IR spectroscopy in providing
direct information on the terephthalate binding modes, but may also
hint that ZTA2a actually exhibits more complex binding
modes than suggested by the X-ray diffraction data.
Figure 3
(a) Different possible
binding modes of carboxylate ligands to
Zn2+ ions. (b) Left: 13C CP MAS NMR spectra
recorded at 14.1 T with a spinning speed of 15 kHz under a regulated
temperature (0 °C) (in black). Right: 13C CP MAS NMR
spectra recorded at 14.1 T with a spinning speed of 4.0 or 4.2 kHz
under a regulated temperature (0 °C) (in black). Black-filled
squares indicate the isotropic chemical shifts. The parameters used
for fitting the spectra (in red) are gathered in Table .
(a) Different possible
binding modes of carboxylate ligands to
Zn2+ ions. (b) Left: 13C CP MAS NMR spectra
recorded at 14.1 T with a spinning speed of 15 kHz under a regulated
temperature (0 °C) (in black). Right: 13C CP MAS NMR
spectra recorded at 14.1 T with a spinning speed of 4.0 or 4.2 kHz
under a regulated temperature (0 °C) (in black). Black-filled
squares indicate the isotropic chemical shifts. The parameters used
for fitting the spectra (in red) are gathered in Table .
Table 4
13C NMR Parameters of Carboxylates
Extracted from Fitting Spectra Recorded at Multiple Spinning Speeds
and Calculated Ones Using DFT from Optimized Structural Models of
the Phases
experimental
calculated (GIPAW-DFT)a
H-relaxed
fully optimized structures
compound
δiso (ppm)
Ω (ppm)
κ
δiso (ppm)
δiso (ppm)
Ω (ppm)
κ
ZTA3
172.1 ± 0.3
136.9 ± 0.4
0.05 ± 0.01
167.6
172.4
130.7
0.15
174.0 ± 0.1
139.9 ± 2.4
0.13 ± 0.01
168.0
175.6
132.3
0.31
ZTA2b
172.1 ± 0.1
137.4 ± 0.2
0.22 ± 0.01
168.0
173.4
136.2
0.15
ZTA2a
172.5 ± 0.2
140.0 ± 8.2
0.34 ± 0.15
175.7 ± 0.1
137.5 ± 0.4
0.20 ± 0.01
199.4
177.6
141.7
0.23
ZTA1
176.6 ± 0.1
154.7 ± 6.3
0.03 ± 0.02
176.5
181.8
146.4
0.35
A systematic study
of 13C chemical shifts was performed in 2009 on 14 molecules
(aromatics
and carbohydrates) whose crystal structures have been precisely determined
by neutron diffraction. This study showed that the GIPAW 13C predictions are more accurate than a cluster approach, with an
error on the isotropic shift of ∼1 ppm.[95]
Here, we decided to perform 13C ssNMR analyses to obtain
more information on the binding mode of the carboxylates. The 13C ssNMR spectra of the four samples obtained by mechanochemistry
are presented in Figure b (see Supporting Information Figure S5 for data on H2BDC). Spectra were recorded with different
spinning speeds, such as to focus on the isotropic chemical shifts
(Figure b, left) or
to derive the chemical shift anisotropy (CSA) parameters (Figure b, right).Based on the reported crystal structures (see Table ), two main binding modes were
expected for the Zn-BDC compounds of interest: monodentate and bridging.
For ZTA1, BDC ligands exhibit a monodentate configuration,
and only one crystallographically inequivalent carboxylate carbon
is present in the structure. For this phase, a single resonance was
observed in the carboxylate region of the 13C ssNMR spectrum
(Figure b), with δiso(13COO) = 176.6 ppm. On the other hand, ZTA2b and ZTA3 structures have different types
of bridging terephthalate ligands based on the reported X-ray diffraction
data. While the former clearly exhibits a single carboxylate environment
(δiso(13COO) = 172.1 ppm), as expected
from the crystal structure, the latter shows two main carboxylate
resonances centered at 174.0 and 172.1 ppm (with an additional shoulder
in the low-frequency area, which could perhaps be due to the presence
of domains within the structure, in which terephthalate ligands exhibit
very slight changes in symmetry/local environment). Finally, for the ZTA2a phase, while only one carbon signal was expected from
the crystallographic structure, two carboxylate resonances were observed,
centered at 175.7 and 172.5 ppm, and present in an ∼5/1 ratio.
The weaker low-frequency resonance was systematically observed for
this phase (for different synthetic batches) and with the same approximate
ratio. Although its 13C chemical shift is relatively close
to that of the H2BDC precursor (173.5 vs 172.5 ppm), no traces of residual H2BDC could be detected
by IR spectroscopy in the C=O stretching region and no acidic
proton signal was observed by 1H ssNMR, meaning that this
small signal cannot arise from the presence of residual H2BDC (see Supporting Information Figures S6 and S7). Moreover, given that no diffraction peaks ascribable to
known impurities could be detected on the X-ray diffraction pattern
of ZTA2a (see Figure c and Supporting Information Figure S3), the weak resonance must correspond to systematic defects
in the crystal structure, which could not be resolved nor identified
by X-ray diffraction.[96]In the literature,
a few articles report 13C ssNMR data
for zinc-carboxylates and more specifically Zn-BDC phases.[37,49−51] In all cases, δiso(13COO) was found to vary between 171.8 and 177.7 ppm. Moreover, when
comparing the reported δiso(13C) values
of bridging carboxylates versus monodentate ones, a trend can be extracted.
Indeed, the δiso(13COO) values of monodentate
ligands are nearly systematically more deshielded than the δiso(13COO) of bridging ones. For example, Yuan et
al. reported values of δiso(13COO) = 176.7
and 177.3 ppm for two Zn-BDC phases exhibiting monodentate binding
modes (the first phase was actually the same as ZTA1,
while the second one was Zn(BDC)(H2O)), and
for a Zn-BDC·DMF MOF with bridging terephthalates, they reported
δiso(13COO) = 172.7 ppm.[50] Similarly, Julien et al. showed that the Zn(H2O)2(2,5-dihydroxyterephthalate) structure, which displays
a monodentate configuration, exhibits a 13C resonance at
δiso(13COO) = 176.0 ppm, while MOF-74,
with bridging 2,5-dihydroxyterephthalate ligands, shows signals at
δiso(13COO) = 173.2 and 173.9 ppm (for
compounds obtained by LAG using either H2O or DMF, respectively).[51] Habib et al. also studied two Zn-dicarboxylate
complexes, [Zn2(μ2-BDC)2(μ4-btre)] and [Zn2(μ3-ip)2(μ2-btre)(H2O)2]·2H2O (with btre = 1,2-bis(1,2,4- triazol-4-yl)ethane, ip = benzene-1,3-dicarboxylate).
Each structure exhibits two distinct δiso(13COO) by 13C ssNMR, corresponding to two monodentate binding
modes (δiso(13COO) = 174.4 and 173.3 ppm)
for the first one, while the second complex has a bridging and a monodentate
ligands (δiso(13COO) = 174.6 and 176.7
ppm).[49] In line with this literature survey,
which shows that the δiso(13COO) values
for monodentate binding modes are globally deshielded compared to
those for bidentate ones, it was found that the isotropic 13C shifts of the carboxylates in ZTA1, ZTA2b, and ZTA3 also appeared to follow this trend. In contrast,
for ZTA2a, there seemed to be discrepancies with what
one would have expected from the reported crystal structure, not only
in the number of 13C resonances (due to the additional
small peak—vide supra) but also in the 13C isotropic shift of the main resonance, which is rather
high for a “bridging mode”. Hence, overall, this points
once again to the issues related to the X-ray data available for this
phase.To go further in the study of these, we conducted various
DFT optimizations
of the different structures studied here. Starting from the reported
crystal structures, H-atoms were positioned (when missing). Then,
keeping cell parameters constant, geometry optimizations were performed
by optimizing either H positions only or all atomic positions. The
H-relaxed structures did not lead to satisfactory results after the
computation of NMR parameters, except for ZTA1 (as illustrated
for δiso(13COO) in Table ). A more complete geometry optimization was thus needed to
refine the various crystal data. Moreover, for some of the structures,
it was necessary to test various initial H orientations for the hydroxyls
before geometry optimization to converge toward a model that matches
best the experimental data; this will be further detailed for ZTA3 later in this article. In all cases, after these additional
geometry optimization steps, the GIPAW-calculated NMR parameters for 13C were found to be in relatively good agreement with the
experimentally extracted values. Notably, δiso(13COO)calc of the monodentate ZTA1 ligand
was the most deshielded of the series, with a calculated 13C chemical shift at 181.8 ppm, while δiso(13COO)calc from bridging ligands were ∼6–10
ppm lower in frequency. Moreover, the calculated chemical shift anisotropy
(CSA) parameters after full geometry optimization were also found
to be in relatively good agreement with the experimental values, as
further discussed below. These DFT-optimized structures can thus be
considered as more reliable structural models of the four Zn-BDC phases
studied here (see Supporting Information Figure S8).A systematic study
of 13C chemical shifts was performed in 2009 on 14 molecules
(aromatics
and carbohydrates) whose crystal structures have been precisely determined
by neutron diffraction. This study showed that the GIPAW 13C predictions are more accurate than a cluster approach, with an
error on the isotropic shift of ∼1 ppm.[95]Following this,
the structures after full relaxation of atom positions
were analyzed in detail, and relationships between calculated 13C NMR parameters and local environments of the carboxylates
(in the geometry-optimized structures) were looked into (see Supporting
Information Figure S9). Significant structural
modifications were observed upon full geometry optimization of some
of the phases. For example, the ZTA3 crystallographic
structure was found to undergo various changes, the major one being
the modification of one zinc coordination from a 5-fold O-coordination
environment (Zn2 in Table ) to a 4-fold one. In the case of ZTA2a, significant
variations in the carboxylate binding modes were observed during the
relaxation of all atom positions, which can explain the ∼20
ppm decrease in the δiso(13COO)calc value between H-relaxed and fully relaxed models (see Table ). Still for this phase, the
calculated 13C NMR parameters were found to be in good
agreement with those of the most intense 13C resonance
(i.e., δiso(13COO)exp = 176.4 ppm vs δiso(13COO)calc = 175.7 ppm), again with a relatively
high chemical shift compared to what one may have expected for bridging
carboxylates. Yet, when looking more closely at the local environment
of the carboxylate after full geometry optimization, the coordination
mode was actually found to be closer to a bridging syn,syn/anti configuration (see Figure a) than to monodentate or bridging syn,syn ones. In this configuration, one of the dZn···O distances was found to be shorter (in the range of dZn···O for syn,syn bridging
modes, i.e., ∼2.0 Å) than the two others
(which were measured between 2.2 and 2.3 Å). This may be one
of the reasons for the higher 13C shift of this phase,
compared to bridging modes involving only shorter Zn···O
bonds.To go even further in trying to relate 13C
NMR parameters
to structural/geometric information about carboxylate bindings, the
calculated data collected from the numerous geometry optimizations
on Zn-BDC phases (especially the ZTA3 structure) were
compiled. The most obvious trend we found was between the δiso(13COO)calc and the longest C–O
distance of the carboxylate, (dC–O)l: the highest chemical shifts are clearly related to
structures with the longest C–O distances (dC–O)l (see Supporting Information Figure S9). A contrario, no
unambiguous relationship relating δiso(13COO) and the type of carboxylate coordination could be extracted,
showing that this parameter actually depends on several factors.As 13C CSA parameters can also be used to describe the
local environment of carbon atoms, these were extracted from the experimental 13C NMR spectra recorded at two different spinning speeds (Table ). The most noticeable
difference between compounds was in the CSA span (Ω), which
was found to be experimentally higher by approximately 15–20
ppm for ZTA1 (monodentate binding) than for the carboxylates
of the three other compounds (155 vs 135–140
ppm, respectively) (see Supporting Information Figure S10 and Table S1). DFT-calculated values of spans also
followed the observed trend, the highest value being for ZTA1, with, however, the calculated span of ZTA2a now only
about 5 ppm lower than that calculated for ZTA1. Using
the data library obtained by optimizing the Zn-BDC structures and
also different structural models of ZTA3, attempts were
made to relate the various CSA parameters stemming from the calculations
to carboxylate binding modes. Here, a general trend was also observed
between the longest C–O distance (dC–O)l and Ωcalc (see Supporting Information Figure S11), but no direct relationship with
the carboxylate coordination.Overall, although hints about
carboxylate local environments could
be derived from 13C ssNMR spectra, no complete insight
into the carboxylate coordination mode could be obtained. Hence, we
then considered analyzing local environments of oxygen atoms because
they are directly coordinated to the Zn2+ ions in the Zn-BDC
structures and may help gain insights into the various binding modes.
17O NMR Analyses of Carboxylate and Hydroxyl Binding
Modes in Zn-BDC Structures
With the aim of directly probing
the binding modes of the terephthalate ligands by 17O ssNMR, 17O-labeled terephthalic acid was used as a starting material
to prepare Zn-BDC phases enriched on the carboxylate groups. Concerning
the bridging hydroxyls, a direct enrichment during the mechanochemical
synthesis of the Zn-BDC phases was envisaged using 17O-enriched
water as a starting reactant (instead of normal water).Both
labeling strategies were tested for each compound (ZTA1, 2a,
2b, and 3) to isolate Zn-BDC phases selectively
enriched on the carboxylates or on the hydroxyls/water and then perform
high-resolution NMR spectroscopy. All samples could be prepared by
mechanochemistry, with selective enrichment on the carboxylate part
(phases noted ZTA-*BDC) or the hydroxyl/water part (phases
noted ZTA-*OH), with the exception of ZTA2b, for which the carboxylate-enriched phase (ZTA2b-*BDC) could not be obtained with sufficient purity to be analyzed by 17O ssNMR. In total, six different enriched samples were thus
isolated with good purity, using the BM synthetic procedure developed
above thanks to the operando Raman setup. In all
cases, preliminary evidence of the success of the enrichment could
be assessed by FTIR, with the slight shifts of vibration modes such
as νas(COO–) and νs(COO–) (see Supporting Information Figure S4c). The corresponding 1D 17O MAS NMR spectra are presented in Figure , which could all be recorded with good sensitivity
in just a few hours.
Figure 4
17O MAS NMR spectra of 17O-labeled
Zn-BDC
compounds prepared by mechanochemistry, B0 = 14.1 T, νrot = 18 kHz, and T = 0 °C. (a) ZTA-*OH samples corresponding to the
enrichment of the hydroxyl/water groups. (b) ZTA-*BDC samples corresponding to the enrichment of the BDC moiety. For all
spectra, experimental spectra are in black, and the red dotted line
corresponds to the results of the fitting process.
17O MAS NMR spectra of 17O-labeled
Zn-BDC
compounds prepared by mechanochemistry, B0 = 14.1 T, νrot = 18 kHz, and T = 0 °C. (a) ZTA-*OH samples corresponding to the
enrichment of the hydroxyl/water groups. (b) ZTA-*BDC samples corresponding to the enrichment of the BDC moiety. For all
spectra, experimental spectra are in black, and the red dotted line
corresponds to the results of the fitting process.Because oxygen-17 is a quadrupolar nucleus, the NMR resonances
recorded on the 1D spectra show characteristic second-order quadrupolar
line shapes. To extract the 17O NMR parameters associated
with each oxygen environment (δiso, CQ, and ηQ), spectra were fitted at multiple
fields (see Supporting Information Figures S14–S17), since the second-order quadrupolar broadening decreases as the
magnetic field increases. Moreover, additional 2D high-resolution
MQMAS (multiple-quantum MAS) experiments were also recorded for some
of the phases, allowing the fits to be further refined (see Supporting
Information Figures S12 and S13).Regarding the ZTA-*OH phases labeled on the hydroxyl/water
positions, the NMR spectra were found to be generally easier to analyze
(Figure a). Only one
*OH site was observed for both ZTA2a-*OH and ZTA2b-*OH, as expected from the published crystal structures. In contrast, ZTA3-*OH was found to exhibit a more complex line shape consisting
of several inequivalent sites (Figure a). These were resolved using a 17O MQMAS
NMR experiment (see Supporting Information Figure S12). Moreover, the OH network of this compound was further
investigated through a 1H–17O dipolar
correlation experiment, as detailed below (see Figure ).
Figure 5
(a) 1H–17O D-HMQC
of ZTA3-*OH recorded at 20.0 T under a spinning speed
of 60 kHz. The 17O and 1H 1D spectra recorded
in the same condition as
the D-HMQC are shown in blue. Extracted slices (in black) are fitted
(red lines) with the experimental parameters presented in Table . The inset displays
the FTIR spectrum centered on the OH stretching region. H-bonded OH
groups are highlighted in orange, and isolated OH groups are shown
in green. (b) Close-up views of the DFT-optimized ZTA3 structure of the different hydroxyl environments; color code: brown
for carbon, red for oxygen, light pink for hydrogen, and purple for
zinc. (c) Comparison of experimental 1H MAS spectrum (recorded
at B0 = 20.0 T and νrot = 60 kHz, in black) and simulated spectrum from calculated 1H NMR parameters in dotted gray.
(a) 1H–17O D-HMQC
of ZTA3-*OH recorded at 20.0 T under a spinning speed
of 60 kHz. The 17O and 1H 1D spectra recorded
in the same condition as
the D-HMQC are shown in blue. Extracted slices (in black) are fitted
(red lines) with the experimental parameters presented in Table . The inset displays
the FTIR spectrum centered on the OH stretching region. H-bonded OH
groups are highlighted in orange, and isolated OH groups are shown
in green. (b) Close-up views of the DFT-optimized ZTA3 structure of the different hydroxyl environments; color code: brown
for carbon, red for oxygen, light pink for hydrogen, and purple for
zinc. (c) Comparison of experimental 1H MAS spectrum (recorded
at B0 = 20.0 T and νrot = 60 kHz, in black) and simulated spectrum from calculated 1H NMR parameters in dotted gray.
Table 5
17O ssNMR Parameters Extracted
from Experimental Spectra (Figure ) Recorded at Multiple Magnetic Fields and Calculated
Using DFT from Structural Models of the Phases
experimental
calculated
enrichment
compound
δiso(17O) (ppm)
CQa (MHz)
ηQ
Int (%)
δiso(17O) (ppm)
CQ (MHz)
ηQ
*OH
ZTA3
12.8 ± 0.6
5.59 ± 0.02
0.30 ± 0.02
27.2
6.1
–7.88
0.64
–1.9 ± 0.1
4.71 ± 0.04
0.43 ± 0.10
17.9
3.7
6.81
0.98
–8.5 ± 0.1
5.22 ± 0.01
0.23 ± 0.02
23.6
0.4
–4.31
0.53
–27.9 ± 0.2
5.92 ± 0.02
0.47 ± 0.01
31.3
–27.3
–7.98
0.51
ZTA2b
–5.6 ± 0.4
5.10 ± 0.10
0.36 ± 0.01
100
–9.9
–5.92
0.33
ZTA2a
5.5 ± 1.3
5.90 ± 0.12
0.25 ± 0.02
100
1.8
–6.89
0.34
ZTA1
–3.2 ± 3.0
7.66 ± 0.20
0.61 ± 0.04
100
–15.8
9.32
0.49
*BDC
ZTA3
258.4 ± 0.1
7.23 ± 0.01
0.56 ± 0.01
28.5
276.3
7.73
0.80
249.0 ± 0.7
6.97 ± 0.02
0.74 ± 0.03
25.3
273.4
7.93
0.84
237.3 ± 0.5
7.06 ± 0.01
0.75 ± 0.06
19.9
254.7
–6.77
0.97
205.2 ± 0.8
6.39 ± 0.05
0.90 ± 0.10
26.3
210.2
–7.26
0.63
ZTA2a
278.3 ± 1.6
7.07 ± 0.10
0.51 ± 0.11
32.3
298.1
7.37
0.69
261.3 ± 1.0
7.04 ± 0.02
0.56 ± 0.13
10.5
255.7 ± 1.5
6.70 ± 0.21
0.88 ± 0.12
5.2
240.3 ± 5.3
6.74 ± 0.30
0.85 ± 0.15
8.7
223.0 ± 1.1
7.85 ± 0.05
0.60 ± 0.08
43.3
253.0
8.79
0.62
ZTA1
286.6 ± 1.3
6.90 ± 0.05
0.46 ± 0.02
50.9
320.6
7.46
0.69
221.7 ± 2.1
5.83 ± 0.49
0.85 ± 0.01
49.1
251.3
–6.71
0.67
Experimental CQ values are given in absolute
values.
The D-HMQC experiment allows 1H···17O proximities to be probed and turned out to be highly useful
to help position the hydroxyl protons (which were absent from the
initial X-ray diffraction data). Here, a short recoupling time was
used (τrec = 100 μs) to observe the shortest
O···H contacts (i.e., the O–H
bonds). In these conditions, no correlation between hydroxyl oxygen
atoms and aromatic protons was observed (blue-shaded zone) but four
environments could be resolved for the hydroxyls, one per inequivalent
OH, in line with the published crystal structure (three being μ3-OH and one being μ2-OH). More interestingly,
when looking at the FTIR spectrum of ZTA3 (see the inset
of Figure a), four
environments of the hydroxyls could also be detected and separated
into two groups: two for isolated OH species (green-shaded zone) and
two for OH species involved in H-bonding (orange-shaded zone). A similar
distinction can be made using the D-HMQC data. Indeed, the most shielded
oxygen site (δiso(17O) = −27.9
ppm) and the most deshielded one (δiso(17O) = 12.8 ppm) are correlated to 1H resonances with low
chemical shift (close to 0 ppm), such 1H shifts being characteristic
of isolated OH groups (zone shaded in green).[97,98] On the other hand, the two remaining OH sites are correlated to 1H resonances, with δiso(1H) close
to 5 ppm, implying that they are involved in hydrogen bonds (orange-shaded
zone).[87−99]Using these high-resolution 1H–17O
experiments as a guideline, different configurations were tested to
position the four hydroxyl hydrogens in the ZTA3 structure,
which were then geometry-optimized by DFT. The resulting GIPAW-DFT-computed 1H ssNMR spectrum of the best model is highly comparable to
the high spinning speed 1H NMR spectrum (Figure c). The resulting refined ZTA3 structure exhibits two isolated hydroxyls: one (O5-H13)
is shared between Zn3–Zn2–Zn3 (μ3-OH),
while the second one (O7–H10) is located between Zn1–Zn2
(μ2-OH); both display a low δiso(1H) chemical shift (1.34 and 0.80 ppm, respectively).
In contrast, the hydroxyl protons denoted H11 and H12 have a higher
chemical shift, indicative of the presence of a hydrogen-bonding network,
as can be seen in the geometry-optimized structure (see Figure b): the H11···O7
and H12···O2 distances were found to be only ∼1.7
Å.Generally speaking, the calculated 17O NMR
parameters
were found to be in satisfactory agreement with those extracted from
experimental data. The overestimation of CQ, often observed in Table , is consistent with what has been recently
reported in the 17O NMR literature on MOFs.[59,100] However, unlike the calculated 13C NMR parameters, no
clear trend between 17O NMR parameters and structural geometric
parameters (dC–O, dZn···O, θZn···O–C...) could be derived (see Supporting Information Figures S18 and S19). This is probably due to the multifactorial
dependence between the 17O NMR parameters and the local
environment and geometry around the oxygen in these structures.Experimental CQ values are given in absolute
values.Concerning the phases
enriched on the carboxylates, the experimental
δiso(17O) arising from the BDC* ligands
of the different structures were found to span between 205.2 and 286.6
ppm (see Figure b). ZTA1-*BDC exhibits two clear inequivalent oxygen resonances,
as expected from the crystal structure. On the contrary, ZTA2a-*BDC and ZTA3-*BDC gave more complex signatures due to the
presence of several overlapping resonances. The 17O MAS
NMR spectra of ZTA3-*BDC could, for example, be fitted
considering the presence of four different 17O signals,
as expected from the crystal structure and resolved with the MQMAS
experiments (see Supporting Information S12). Concerning the ZTA2a-*BDC phase, only two carboxylate
oxygen resonances were expected according to the reported crystal
structure. However, it was not possible to obtain a satisfactorily
simulated spectrum with only two signals. This result supports the
observation made previously by 13C NMR for ZTA2a, where an additional 13C carboxylate resonance of weak
intensity was detected at 172.5 ppm (see Figure b).To learn more about the minor carboxylate
environments in ZTA2a, the 17O MQMAS spectrum
of ZTA2a-*BDC was recorded (Figure ). The two most intense resonances, which
are centered at δiso(17O) = 278.3 and
223.0 ppm, belong to the main
carboxylate group (i.e., with the 13C
signal at 175.7 ppm). Yet, several signals of weaker intensity can
also be observed (red-shaded circle), corresponding to multiple and
slightly different carboxylate local environments (such regions of
signals with lower intensity have been observed on two different batches
of ZTA2a-*BDC with two different NMR spectrometers).
Three examples of these additional oxygen environments were extracted
from this area for further study (Figure , right).
Figure 6
17O MQMAS spectrum of ZTA2a-*BDC recorded
at B0 = 18.8 T under νrot = 16 kHz. Extracted slices (in black) are fitted (red dotted lines)
with experimental parameters presented in Table . The red-shaded circle enlightens some of
the additional oxygen sites corresponding to structural defects.
17O MQMAS spectrum of ZTA2a-*BDC recorded
at B0 = 18.8 T under νrot = 16 kHz. Extracted slices (in black) are fitted (red dotted lines)
with experimental parameters presented in Table . The red-shaded circle enlightens some of
the additional oxygen sites corresponding to structural defects.Despite their low signal-to-noise ratio, the signals
from the three
different slices could be tentatively fitted using quadrupolar line
shapes, suggesting that they correspond to carboxylate oxygens in
a relatively well-ordered local environment. Using the NMR parameters
derived from the different 17O environments resolved by
MQMAS, it was then possible to propose a fit of the 17O
NMR spectra of ZTA2a-*BDC in the carboxylate region (see Figure b and Table ). However, it should be kept
in mind that additional weak-intensity carboxylate resonances may
also be overlapping with the two main resonances (which remained unresolved
at this stage). Interestingly, the 17O NMR data also show
that the main resonances for ZTA2a-*BDC (δiso(17O) = 278.3 and 223.0 ppm) are relatively close
in shift to those of ZTA1-*BDC (δiso(17O) = 286.6 and 221.7 ppm), further underscoring the
similarities between 17O ssNMR and 13C ssNMR
parameters (δiso(17O), δiso(13COO), and 13C CSA) for the two different
binding modes, i.e., syn,syn/anti bridging (ZTA2a) and monodentate (ZTA1). Regarding the weaker signals (red circle in Figure ), they are likely
to arise from the presence of the systematic defects inside the crystallographic
structure, as already hinted from the 13C NMR data.Thanks to the selective 17O-labeling of the various
Zn-BDC compounds by BM, it was possible to gain novel insights into
the local environment of the oxygen-containing ligands, as well as
refine one of the crystallographic structures (ZTA3)
by DFT calculations. Although no straightforward trend relating 17O NMR parameters to carboxylate binding modes could be derived,
most probably because of the influence of several geometrical features
(Zn···O and O–C distances, bond angles, positioning
of neighboring ligands, etc.), high-resolution 17O ssNMR spectroscopy, in conjunction with DFT calculations
and GIPAW calculations of NMR parameters, clearly appears as a crucial
asset to help confirm the structural models of these types of MOFs.
In particular, they will be useful in the future to help elucidate
the nature of the defect sites in ZTA2a in an NMR crystallography
type of approach.[101]
Outlook:
Isotope Labeling for Simplified In Situ Observations
of Evolutions in the Reaction Media
Because structural rearrangements
occur around the water molecules/hydroxyls during the Zn-BDC transformations
described above, being able to follow this by Raman spectroscopy appeared
to us as an important goal to increase our insight into the transformations
taking place. Unfortunately, it was not possible to follow the evolution
of the O–H stretching modes upon synthesis by BM with our Raman
setup because it only allowed spectra to be recorded from 220 to 3120
cm–1, while ν(OH) bands most often appears
at higher wavenumbers.[102−104]To circumvent this issue,
we thus decided to perform isotope labeling of Zn-BDC phases using
deuterium oxide rather than normal water as a starting material in
the syntheses. In doing so, the stretching modes arising from −OH
groups would correspond to -OD groups, which can be observed between
2400 and 2800 cm–1. Figure presents as an example the result of a synthesis
followed by operando Raman spectroscopy and performed
using an initial Zn/BDC ratio of 3/1 (i.e., one additional
equivalent of ZnO compared to the experiment presented in Figure ) and D2O instead of H2O. The corresponding temperature measurement
through the thermal imaging camera is placed on the side of the Raman
spectra (Figure a),
and the focus of the Raman data is set in the zone between 2600 and
2700 cm–1, where O–D stretching vibrations
appear.
Figure 7
(a) Top: starting compounds used for the operando experiment with their respective equivalents. Bottom: time-resolved operando Raman spectra of two selected areas: 2600–2700
cm–1 range on the left and 1380–1480 cm–1 range on the right, following the Raman spectroscopy
convention for displaying the data (high wavenumbers on the right).
The graph on the far right corresponds to the temperature measurement
recorded using the thermal imaging camera. (b) Experimental ex situ FTIR spectra of ZTA2b (in blue), ZTA2b-OD (in light blue), ZTA3 (in purple), and ZTA3-OD (in light purple), following the FTIR spectroscopy
convention for displaying the data (high wavenumbers on the left).
(a) Top: starting compounds used for the operando experiment with their respective equivalents. Bottom: time-resolved operando Raman spectra of two selected areas: 2600–2700
cm–1 range on the left and 1380–1480 cm–1 range on the right, following the Raman spectroscopy
convention for displaying the data (high wavenumbers on the right).
The graph on the far right corresponds to the temperature measurement
recorded using the thermal imaging camera. (b) Experimental ex situ FTIR spectra of ZTA2b (in blue), ZTA2b-OD (in light blue), ZTA3 (in purple), and ZTA3-OD (in light purple), following the FTIR spectroscopy
convention for displaying the data (high wavenumbers on the left).With the starting experimental conditions used
here, it is expected
to obtain a different final product (i.e., ZTA3) compared to the experiment presented in Figure (final product was ZTA2b). The formation and progressive transformation of the intermediates
into ZTA3 are indeed noticeable through the change in
temperature, as well as the modifications of the Raman spectra. It
should be noted that no signal from ZTA1 was observed
in the 2600–2700 cm–1 area (Figure ) because of the lack of isolated
OH environments in this phase, the water molecules being involved
in hydrogen bonds. The broad signal arising from these water molecules
is indeed too weak to be detected during the operando Raman experiment. Hence, in the 2600–2700 cm–1 range, when working with a 3/1 Zn/BDC ratio in D2O, we
observed first the formation of the ZTA2a-OD, through
the presence of the ν(OD) band (2660 cm–1).
As with the synthesis presented in Figure , it then transforms into the ZTA2b-OD structure (2618 cm–1). Then, the excess of zinc
oxide allows the formation of the ZTA3-OD compound as
the final form (ν(OD) = 2630 and 2671 cm–1). This final phase has a Zn/BDC stoichiometry of 3/1, consistent
with the one between the reagents introduced in the jar. The transformation
from H2BDC to ZTA3 can also be observed looking
at νs(COO–) band between 1380 and
1480 cm–1, the only difference with Figure being the final transformation
into the ZTA3 phase (ZTA3-OD here) in the
later synthesis. It is worth noting that we were able to observe the
two distinct sharp O–D bands in the final compound, corresponding
to the expected two isolated hydroxyls (Zn–O(H)–Zn).The interest of using deuterated precursors for operando Raman mechanochemistry was further demonstrated here, using ring-d4 terephthalic acid as a starting reagent. In
doing so, the ν(CH) Raman signals become ν(CD) signals,
which, in the case of ZTA1, for example, corresponds
to a shift of the stretching vibrations from 3064 and 3105 cm–1 to 2287 and 2321 cm–1 (see Supporting
Information Figure S20).[105] Therefore, isotope labeling by deuteration can be seen
as a way of shifting Raman vibrations in an area of the spectrum where
no signal from the jar is expected, allowing a more straightforward
observation of the evolving vibration modes as well as an easier postsynthesis
data treatment. Both methods, using D2O or d4-BDC, can also be combined to study the change of kinetics
for such reactions. Overall, this demonstrates, beyond the study of
reaction mechanisms in ball-milling,[106] how isotopic labeling by deuteration can be particularly useful
also for following the kinetics in mechanochemical reactions by shifting
vibration bands into regions where they become detectable (e.g., OD vs OH) and/or to avoid overlaps
with other vibration frequencies (including from the jar). Such strategies
may also turn out to be particularly valuable to refine kinetic data,
which may be ambiguous in other regions (as highlighted at the beginning
of this manuscript) and thereby help elucidate complex mechanochemical
reactions.
Conclusions
In this contribution,
we have performed the first in-depth study
of the formation and structure of four coordination polymers involving
Zn2+ cations and terephthalate ligands, noted ZTA1, ZTA2a, ZTA2b, and ZTA3.
Although each of these phases had been previously reported independently
(for instance, as part of investigations aiming at studying the formation
of the well-known MOF-5 structure), the details of their structure,
and in the case of ZTA2a, the possibility to isolate
it as phase-pure, were missing. Here, it is shown for the first time
how using mechanochemistry, in conjunction with operando Raman spectroscopy and thermal imaging, the evolution of the reaction
medium could be followed. Each of the phases could be isolated as
pure, either by adapting the stoichiometry of the Zn and BDC precursors
involved in the milling, or by stopping the milling synthesis at a
specific time point based on knowledge of the kinetics of the reactions.
The study of the formation of ZTA3 by mechanochemistry
was shown to proceed through the successive formation of the ZTA1, ZTA2a, and ZTA2b intermediates
(see Figure ).
Figure 8
Summary of
the structural evolution of the Zn-BDC compounds presented
in this article upon milling synthesis. The molecular schemes arise
from the DFT-optimized structures obtained in this article.
Summary of
the structural evolution of the Zn-BDC compounds presented
in this article upon milling synthesis. The molecular schemes arise
from the DFT-optimized structures obtained in this article.For each of the phases, an NMR crystallography
approach was then
used, combining high-resolution NMR spectroscopy with ab initio DFT calculations of NMR parameters, to help refine the crystal structures,
as much information was lacking in the crystallographic data available
to date. Regarding 13C ssNMR, a systematically lower δiso(13COO) was observed for syn,syn bridging ligands as opposed to monodentate and weaker syn,syn/anti bridging modes (∼4 ppm difference in
shifts). Moreover, δiso(13COO) and the
CSA span (Ω) parameter were found to correlate reasonably well
with the longest C–O distance of the carboxylate, making the
measurement of these parameters valuable for extracting structural
information in future studies of other unknown Zn-terephthalate coordination
networks. Furthermore, the 13C ssNMR study allowed an additional
carboxylate resonance to be detected for the ZTA2a compound
reflecting the likely presence of “defect” in that structure.Regarding 17O ssNMR, the key point to highlight is that
using the protocols developed here by mechanochemistry, it was possible
to produce, at low cost, selectively 17O-labeled phases
in high yield, with either enriched hydroxyls (Zn–O*(H)–Zn)
or enriched carboxylates (CO*O*–Zn) and no isotopic scrambling
during the milling (as shown in Figures S14 and S15). Such selective labeling was possible because reactions
were performed here by BM under “ambient” temperature
and pressure, and in short times (less than 3 h). Moreover, it is
important to highlight that the syntheses of these 17O-enriched
compounds would have been far too expensive if not for the BM procedures
optimized through the use of real-time monitoring Raman spectroscopy.
Indeed, the extent of enriched H2O* employed here was very
low (for ZTA-*OH, ∼45 μL for ∼300
mg of sample recovered and ∼20 μL for ∼110 mg
of sample recovered for ZTA-*BDC) and could not have
been matched for syntheses carried out using the hydrothermal or microwave
procedures proposed so far to prepare such compounds. Thanks to this
isotopic labeling, high-resolution 17O ssNMR spectra could
be recorded for each of the phases in just a few hours, allowing different
carboxylate oxygen and hydroxyl environments to be resolved. This
enabled, for example, a very precise positioning of hydroxyl hydrogens
in the case of the ZTA3 phase. Regarding terephthalate
ligands, however, no straightforward correlation between 17O NMR parameters and geometric features around the carboxylate oxygens
could be derived, showing that the 17O data in these phases
are very sensitive to the local environment of oxygen and depend on
many different factors (e.g., bond distances, angles).
This implies that combined experimental–computational approaches
involving various NMR-active nuclei, including 17O, are
a very valuable tool for validating structural models (and notably
carboxylate binding modes) of these materials.Among the four
phases studied, the ZTA2a compound
was proven to present a more complex structure than the one reported,
with the probable presence of “defect” sites, as evidenced
from both 13C and 17O ssNMR analyses. The information
derived from these spectra can serve as the basis for proposing structural
models of these defects, which can then be validated using DFT calculations
of NMR parameters. More generally speaking, considering the increasing
number of studies on MOF structures, which highlight the importance
of further refining structural data (beyond what is possible by using
powder X-ray diffraction) and to establish the nature and role of
defects on reactivity, the possibility of using approaches such as
the ones proposed herein, including selective 17O isotopic
enrichment, appears very valuable.Lastly, through the study
of the mechanochemical formation of the
four Zn-BDC phases using operando Raman spectroscopy,
we also demonstrate here for the first time how the use of deuterated
precursors can be useful to help follow the course of the reactions
by enabling the observation of specific vibration modes (e.g., ν(OD) and/or ν(CD)) and thereby avoiding cutoff of
high wavenumbers of the ν(OH) and/or ν(CH) modes due to
instrumentation, and/or avoiding their overlap with signals arising
from the milling jar in the Raman spectra. We foresee that on a more
general perspective, the study of deuterated compounds in operando Raman investigations by BM will be particularly
useful to refine the understanding of the reactions occurring in the
jars and may enable the more straightforward investigation and optimization
of reactions, which not only concern the formation of MOFs but may
actually more specifically involve the formation of C–D (instead
of C–H) bonds, as it is the case in reduction reactions in
organic chemistry.
Authors: Bahar Karadeniz; Dijana Žilić; Igor Huskić; Luzia S Germann; Athena M Fidelli; Senada Muratović; Ivor Lončarić; Martin Etter; Robert E Dinnebier; Dajana Barišić; Nikola Cindro; Timur Islamoglu; Omar K Farha; Tomislav Friščić; Krunoslav Užarević Journal: J Am Chem Soc Date: 2019-11-26 Impact factor: 15.419
Authors: Henryk T Flakus; Barbara Hachuła; Jakub T Hołaj-Krzak; Faisal A Al-Agel; Najeh Rekik Journal: Spectrochim Acta A Mol Biomol Spectrosc Date: 2016-08-29 Impact factor: 4.098
Authors: Saad Sene; Marc Reinholdt; Guillaume Renaudin; Dorothée Berthomieu; Claudio M Zicovich-Wilson; Christel Gervais; Philippe Gaveau; Christian Bonhomme; Yaroslav Filinchuk; Mark E Smith; Jean-Marie Nedelec; Sylvie Bégu; P Hubert Mutin; Danielle Laurencin Journal: Chemistry Date: 2012-12-27 Impact factor: 5.236
Authors: Giulia P M Bignami; Zachary H Davis; Daniel M Dawson; Samuel A Morris; Samantha E Russell; David McKay; Richard E Parke; Dinu Iuga; Russell E Morris; Sharon E Ashbrook Journal: Chem Sci Date: 2017-11-23 Impact factor: 9.825