| Literature DB >> 35273952 |
Ali Dai1, Zhiguo Zheng1, Lijiao Yu1, Yuanqin Huang1, Jian Wu1.
Abstract
A series of 1,3,4-oxadiazole contained sesquiterpene derivatives were synthesized, and the activity of the target compounds against Xanthomonas oryzae pv. oryzae (Xoo), Xanthomonas axonopodis pv. citri (Xac), and tobacco mosaic virus (TMV) were evaluated. The biological activity results showed that the EC50 values of compounds H4, H8, H11, H12, H14, H16, and H19 for Xac inhibitory activity were 33.3, 42.7, 56.1, 74.5, 37.8, 43.8, and 38.4 μg/ml, respectively. Compounds H4, H8, H15, H19, H22, and H23 had inhibitory effects on Xoo, with EC50 values of 51.0, 43.3, 43.4, 50.5, 74.6, and 51.4 μg/ml, respectively. In particular, the curative and protective activities of compound H8 against Xoo in vivo were 51.9 and 49.3%, respectively. In addition, the EC50 values of the inactivation activity of compounds H4, H5, H9, H10, and H16 against TMV were 69.6, 58.9, 69.4, 43.9, and 60.5 μg/ml, respectively. The results of molecular docking indicated that compound H10 exhibited a strong affinity for TMV-coat protein, with a binding energy of -8.88 kcal/mol. It may inhibit the self-assembly and replication of TMV particles and have an anti-TMV effect, which supports its potential usefulness as an antiviral agent.Entities:
Keywords: 1,3,4-oxadiazole; biological activity; rice bacterial blight; sesquiterpene derivatives; synthesis; tobacco mosaic virus
Year: 2022 PMID: 35273952 PMCID: PMC8902154 DOI: 10.3389/fchem.2022.854274
Source DB: PubMed Journal: Front Chem ISSN: 2296-2646 Impact factor: 5.221
FIGURE 1Design strategy of the target compounds.
In vitro antibacterial activity of the target compounds against Xoo and Xac .
| Compd |
|
| ||
|---|---|---|---|---|
| 100 μg/ml | 50 μg/ml | 100 μg/ml | 50 μg/ml | |
|
| 46.3 ± 4.6 | 23.8 ± 3.9 | 53.2 ± 3.4 | 45.3 ± 4.5 |
|
| 20.9 ± 4.8 | 14.5 ± 3.4 | 49.6 ± 4.4 | 40.4 ± 2.9 |
|
| 30.9 ± 3.2 | 22.7 ± 3.4 | 41.1 ± 2.7 | 39.1 ± 0.1 |
|
| 64.5 ± 1.2 | 48.6 ± 2.3 | 73.3 ± 3.4 | 55.6 ± 3.1 |
|
| 49.5 ± 3.0 | 22.9 ± 3.0 | 58.5 ± 1.8 | 36.1 ± 1.6 |
|
| 21.1 ± 4.4 | 15.6 ± 1.6 | 46.7 ± 1.6 | 38.7 ± 4.0 |
|
| 34.4 ± 3.2 | 33.7 ± 2.5 | 53.6 ± 1.9 | 34.5 ± 4.6 |
|
| 70.2 ± 4.9 | 52.2 ± 1.1 | 65.1 ± 4.1 | 44.5 ± 3.1 |
|
| 40.6 ± 3.4 | 25.5 ± 0.6 | 37.2 ± 4.3 | 24.1 ± 2.7 |
|
| 16.6 ± 4.1 | 14.8 ± 0.6 | 47.7 ± 4.1 | 43.3 ± 3.9 |
|
| 43.2 ± 3.2 | 19.0 ± 3.0 | 62.4 ± 3.2 | 45.9 ± 3.6 |
|
| 24.6 ± 4.7 | 22.4 ± 3.4 | 58.7 ± 4.7 | 36.3 ± 1.5 |
|
| 38.0 ± 1.1 | 22.5 ± 4.5 | 53.5 ± 3.4 | 35.4 ± 1.6 |
|
| 38.0 ± 4.2 | 26.8 ± 3.2 | 70.5 ± 3.9 | 47.2 ± 0.5 |
|
| 69.5 ± 4.5 | 42.3 ± 2.4 | 44.7 ± 1.1 | 40.6 ± 4.5 |
|
| 28.6 ± 3.6 | 20.2 ± 1.1 | 62.8 ± 1.3 | 43.7 ± 4.9 |
|
| 28.1 ± 1.1 | 25.4 ± 1.6 | 52.0 ± 1.2 | 46.5 ± 1.4 |
|
| 50.2 ± 2.0 | 32.4 ± 3.3 | 50.5 ± 3.8 | 29.0 ± 2.8 |
|
| 65.7 ± 4.7 | 47.1 ± 3.3 | 66.6 ± 1.5 | 48.4 ± 1.8 |
|
| 53.1 ± 1.8 | 42.0 ± 3.9 | 42.5 ± 2.2 | 41.8 ± 2.3 |
|
| 48.7 ± 4.6 | 47.8 ± 3.0 | 35.5 ± 2.8 | 34.1 ± 2.9 |
|
| 60.1 ± 4.6 | 46.7 ± 2.2 | 48.4 ± 2.1 | 32.3 ± 4.4 |
|
| 57.3 ± 2.2 | 38.7 ± 3.1 | 32.7 ± 3.4 | 30.9 ± 3.8 |
|
| 73.5 ± 0.7 | 56.6 ± 4.7 | 64.6 ± 1.9 | 51.2 ± 1.4 |
|
| 56.7 ± 3.8 | 48.5 ± 1.3 | 76.8 ± 0.7 | 65.2 ± 2.0 |
Average of three replicates.
The commercial agricultural antibacterial agents bismerthiazol. (BT) and thiodiazole copper (TC) were used as positive control.
Antibacterial activities of some target compounds against Xoo and Xac in Vitro .
| Compd |
|
| ||||
|---|---|---|---|---|---|---|
| Regression equation |
| EC50 ( | Regression equation |
| EC50 ( | |
|
| y = 1.22x + 2.9 | 0.99 | 51.0 ± 3.3 | y = 1.15x + 3.2 | 0.98 | 33.3 ± 1.0 |
|
| y = 1.20x + 3.0 | 0.97 | 43.3 ± 4.3 | y = 0.74x + 3.7 | 0.96 | 42.7 ± 1.8 |
|
| y = 0.89x + 3.4 | 0.97 | 56.1 ± 3.5 | |||
|
| y = 0.78x + 3.5 | 0.94 | 74.5 ± 3.4 | |||
|
| y = 0.90x + 3.5 | 0.90 | 37.8 ± 3.1 | |||
|
| y = 1.54x + 2.4 | 0.92 | 43.4 ± 3.0 | |||
|
| y = 0.83x + 3.6 | 0.98 | 43.8 ± 3.3 | |||
|
| y = 1.12x + 3.0 | 0.98 | 50.5 ± 4.0 | y = 0.90x + 3.5 | 0.97 | 38.4 ± 4.6 |
|
| y = 1.00x + 3.1 | 0.94 | 74.6 ± 2.2 | |||
|
| y = 1.41x + 2.5 | 0.99 | 51.4 ± 3.3 | |||
|
| y = 1.63x + 2.3 | 0.98 | 41.8 ± 4.1 | y = 0.76x + 3.7 | 0.98 | 38.2 ± 3.1 |
|
| y = 1.04x + 3.1 | 0.99 | 61.4 ± 1.8 | y = 1.07x + 3.4 | 0.97 | 25.1 ± 1.9 |
Average of three replicates.
The commercial agricultural antibacterial agents bismerthiazol (BT) and thiodiazole copper (TC) were used as positive control.
The curative activity of compound H8 against Xanthomonas oryzae pv. oryzae in Vivo at 200 μg/ml.
| Treatment | 14 Days after spraying | ||
|---|---|---|---|
| Morbidity (%) | Disease index (%) | Control efficiency (%) | |
|
| 100 | 41.7C | 51.9A |
|
| 100 | 45.8B | 47.1B |
|
| 100 | 46.6B | 46.1B |
|
| 100 | 86.7A | |
Statistical analysis was conducted by the analysis of variance method under the conditions of equal variances assumed (p > 0.05) and equal variances not assumed (p < 0.05). Different uppercase letters indicate the values of curative activity with significant difference among different treatment groups at p < 0.05.
Commercial bactericides bismerthiazol (BT) and thiodiazole copper (TC) were used as positive control agents.
Negative control.
The Protective activity of compound H8 against Xanthomonas oryzae pv. oryzae in Vivo at 200 μg/ml
| Treatment | 14 Days after spraying | ||
|---|---|---|---|
| Morbidity (%) | Disease index (%) | Control efficiency (%) | |
|
| 100 | 42.8D | 49.3A |
|
| 100 | 45.8C | 45.8B |
|
| 100 | 47.6B | 43.7C |
|
| 100 | 84.6A | |
Statistical analysis was conducted by the analysis of variance method under the conditions of equal variances assumed (p > 0.05) and equal variances not assumed (p < 0.05). Different uppercase letters indicate the values of protective activity with significant difference among different treatment groups at p < 0.05.
Commercial bactericides bismerthiazol (BT) and thiodiazole copper (TC) were used as positive control agents.
Negative control.
FIGURE 2Curative and protective activities of compound H8 against rice bacterial leaf blight under greenhouse conditions at 200 μg/ml, with BT and TC as the positive control agents.
Antiviral activities of target compounds against TMV in Vivo at 500 μg/mL .
| Compd | Curative activityb (%) | Inactivation activity |
|---|---|---|
|
| 59.1 ± 2.1 | 52.3 ± 3.8 |
|
| 50.5 ± 4.5 | 63.2 ± 2.7 |
|
| 58.7 ± 4.0 | 81.7 ± 2.3 |
|
| 54.3 ± 2.8 | 82.0 ± 5.0 |
|
| 53.2 ± 3.2 | 87.5 ± 0.5 |
|
| 48.3 ± 5.0 | 71.0 ± 2.0 |
|
| 55.5 ± 4.5 | 64.3 ± 5.0 |
|
| 68.3 ± 4.1 | 45.7 ± 3.2 |
|
| 77.5 ± 0.5 | 82.0 ± 3.7 |
|
| 58.4 ± 1.8 | 90.5 ± 1.0 |
|
| 55.4 ± 1.2 | 74.8 ± 1.5 |
|
| 63.5 ± 2.5 | 36.3 ± 4.4 |
|
| 51.3 ± 2.3 | 56.0 ± 4.0 |
|
| 46.7 ± 1.6 | 72.5 ± 2.5 |
|
| 49.9 ± 4.6 | 61.7 ± 2.6 |
|
| 67.5 ± 4.5 | 87.3 ± 1.6 |
|
| 46.9 ± 0.2 | 64.5 ± 0.5 |
|
| 36.4 ± 0.7 | 61.5 ± 1.5 |
|
| 63.3 ± 4.7 | 76.0 ± 2.0 |
|
| 50.4 ± 1.2 | 54.5 ± 2.5 |
|
| 57.8 ± 3.6 | 77.0 ± 2.0 |
|
| 57.6 ± 0.7 | 75.0 ± 5.0 |
|
| 59.6 ± 0.1 | 40.3 ± 1.8 |
|
| 45.4 ± 1.6 | 72.3 ± 0.5 |
|
| 70.0 ± 3.8 | 90.0 ± 1.5 |
Average of three replicates.
Concentration of compounds is 500 μg/ml
Commercial antiviral agent ribavirin and ningnanmycin.
EC50 of inactivation activity of some target compounds against TMV.
| Compd | Regression equation |
| EC50
|
|---|---|---|---|
|
| y = 1.01x + 3.1 | 0.99 | 69.6 ± 4.6 |
|
| y = 1.18x + 2.9 | 0.96 | 58.9 ± 3.5 |
|
| y = 1.02x + 3.1 | 0.99 | 69.4 ± 4.5 |
|
| y = 1.23x + 2.9 | 0.99 | 43.9 ± 4.2 |
|
| y = 1.15x + 2.9 | 0.97 | 60.5 ± 2.9 |
|
| y = 1.22x + 2.9 | 0.99 | 44.8 ± 2.8 |
Average of three replicates.
Ningnanmycin was used as the control.
FIGURE 3Molecule docking and MD simulation studies: (A) molecule docking of ningnanmycin, (B) molecule docking of compound H10, (C) MD simulation of ningnanmycin, (D) MD simulation of compound H10.
SCHEME 1The synthetic route of the target compounds H1-H23.