| Literature DB >> 35269966 |
Kinga Paruch1, Anna Biernasiuk2, Dmytro Khylyuk1, Roman Paduch3, Monika Wujec1, Łukasz Popiołek1.
Abstract
In our research, we used nicotinic acid as a starting compound, which was subjected to a series of condensation reactions with appropriate aldehydes. As a result of these reactions, we were able to obtain a series of twelve acylhydrazones, two of which showed promising activity against Gram-positive bacteria (MIC = 1.95-15.62 µg/mL), especially against Staphylococcus epidermidis ATCC 12228 (MIC = 1.95 µg/mL). Moreover, the activity of compound 13 against the Staphylococcus aureus ATCC 43300 strain, i.e., the MRSA strain, was MIC = 7.81 µg/mL. Then, we subjected the entire series of acylhydrazones to a cyclization reaction in the acetic anhydride, thanks to which we were able to obtain twelve new 3-acetyl-2,5-disubstituted-1,3,4-oxadiazoline derivatives. Obtained 1,3,4-oxadiazolines were also tested for antimicrobial activity. The results showed high activity of compound 25 with a 5-nitrofuran substituent, which was active against all tested strains. The most promising activity of this compound was found against Gram-positive bacteria, in particular against Bacillus subtilis ATCC 6633 and Staphylococcus aureus ATCC 6538 (MIC = 7.81 µg/mL) and ATCC 43300 MRSA strains (MIC = 15.62 µg/mL). Importantly, the best performing compounds did not show cytotoxicity against normal cell lines. It seems practical to use some of these compounds or their derivatives in the future in the prevention and treatment of infections caused by some pathogenic or opportunistic microorganisms.Entities:
Keywords: N-acetyl-1,3,4-oxadiazoline derivatives; acylhydrazones; antimicrobial activity; cytotoxicity; molecular modelling
Mesh:
Substances:
Year: 2022 PMID: 35269966 PMCID: PMC8911400 DOI: 10.3390/ijms23052823
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Lists of common microorganisms with high antibiotic resistance.
| Microorganisms | Antibiotic Resistance | Type of Caused Infections/Diseases | References |
|---|---|---|---|
| methicillin (methicillin-resistant | skin and soft-tissue infections (furuncles, carbuncles), abscesses, osteomyelitis, surgical site infections, bloodstream infections, sepsis, pneumonia, endocarditis, meningitis, urinary tract infections, bone and joint infections, osteoarticular infections, | [ | |
| vancomycin (VRE—vancomycin-resistant enterococci) | bloodstream infections, urinary tract infections, surgical site infections, | [ | |
| penicillin (PRP—penicillin-resistant | bloodstream infections, surgical site infections, pneumonia, upper respiratory tract infections, meningitis, ear and sinus infections | [ | |
| beta-lactams (ESBL—extended spectrum beta-lactamase producing | intra-abdominal infections and diseases of abdomen, bloodstream infections, urinary tract infections, surgical site infections, pneumonia, upper respiratory tract infections, meningeal, eye, bone infections, skin and soft-tissue infections, febrile neutropenia, surgical wound infections | [ | |
| Non-fermenting Gram-negative rods | carbapenems (multi-drug resistant | pneumonia, bloodstream infections, skin and soft-tissue infection (burns), complicated urinary tract infections and abdominal infections, heart, brain, catheter-related, and at surgical sites | [ |
| azoles | bloodstream infections, urinary tract infections, pneumonia, superficial and mucosal infections, life-threatening disseminated candidiasis | [ |
Scheme 1Reaction leading to novel 3-acetyl-2,5-disubstituted-1,3,4-oxadiazoline derivatives.
The activity data of acylhydrazones and 3-acetyl-1,3,4-oxadiazoline derivatives expressed as MIC (MBC or MFC) (µg/mL) and {MBC/MIC or MFC/MIC} values against the reference strains of microorganisms.
| Species/ | MIC (MBC or MFC) (µg/mL) and {MBC/MIC or MFC/MIC} of Compounds and Reference Substances | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5 | 7 | 9 | 13 | 14 | 15 | 16 | 17 | 18 | 23 | 24 | 25 | CIP/ | NIT | CFX | APC | ||
|
| 7.81 | - | 500 | 3.91 | 1000 | 125 | 1000 | 15.62 | - | - | 500 | 7.81 | 0.24 | 15.62 | 0.98 | nd | |
| 15.62 | - | - | 7.81 | - | 250 | - | 31.25 | - | - | - | 15.62 | 0.24 | 7.81 | nd | nd | ||
| 7.81 | - | - | 7.81 | - | 1000 | 1000 | 31.25 | - | - | - | 15.62 | 0.48 | nd | nd | nd | ||
| 7.81 | - | 62.5 | 1.95 | - | 500 | - | 7.81 | - | - | - | 15.62 | 0.12 | 3.91 | 0.24 | nd | ||
| 7.81 | - | - | 15.62 | - | - | - | 31.25 | - | - | - | 62.5 | 0.98 * | nd | nd | nd | ||
| 7.81 | 1000 | 1000 | 15.62 | 500 | 1000 | 500 | 31.25 | - | 500 | 250 | 15.62 | 0.98 | 62.5 | 0.98 | nd | ||
| 15.62 | - | - | 7.81 | - | 1000 | - | 62.5 | - | - | 1000 | 7.81 | 0.03 | 3.91 | 15.62 | 62.5 | ||
| 7.81 | - | - | 15.62 | - | 500 | - | 31.25 | - | - | - | 31.25 | 0.06 | 7.81 | 31.25 | nd | ||
|
| 62.5 | - | - | 500 | - | - | - | - | - | - | - | 125 | 0.98 | 125 | nd | nd | |
| - | - | - | 250 | - | - | - | - | - | - | - | 125 | 0.12 | 15.62 | nd | nd | ||
| - | - | - | 62.5 | - | - | - | - | - | - | - | 62.5 | 0.03 | 62.5 | nd | nd | ||
| - | - | - | 31.25 | - | - | - | - | - | - | - | 62.5 | 0.06 | 31.25 | nd | nd | ||
| - | - | - | 31.25 | - | - | - | - | - | - | - | 31.25 | 0.004 | 7.81 | nd | nd | ||
| - | - | - | 250 | - | - | - | - | - | - | - | 250 | 0.48 | nd | nd | nd | ||
|
| 250 | - | - | - | 1000 | 1000 | - | - | 1000 | 1000 | 500 | 125 | 0.24 ** | na | na | na | |
| 125 | - | - | - | 1000 | 1000 | - | - | 1000 | 500 | 500 | 15.62 | 0.48 ** | na | na | na | ||
| 250 | - | - | - | 1000 | 1000 | - | - | 500 | 1000 | 500 | 15.62 | 0.24 ** | na | na | na | ||
| 62.5 | - | - | - | 1000 | - | - | - | - | 1000 | 500 | 500 | 0.24 ** | na | na | na | ||
| 250 | - | - | - | 1000 | 1000 | - | - | - | - | 500 | 250 | 0.24 ** | na | na | na | ||
‘-‘: no activity; nd: not determined; na: not applicable. The standard chemotherapeutics used as positive controls: ciprofloxacin (CIP), nitrofurantoin (NIT), cefuroxime (CFX) and ampicillin (APC) for bacteria except Enterococcus faecalis ATCC 29212, vancomycin (VA*) for Enterococcus faecalis ATCC 29212 and nystatin (NY**) for fungi. Compounds with bactericidal effect (MBC/MIC ≤ 4) or fungicidal effect (MFC/MIC ≤ 4) are marked with bold font; No bioactivity—MIC > 1000 μg/mL; mild bioactivity—MIC = 501–1000 μg/mL; moderate bioactivity—MIC = 126–500 μg/mL; good bioactivity—MIC = 26–125 μg/mL; strong bioactivity—MIC = 10–25 μg/mL; very strong bioactivity—MIC < 10 μg/mL; *: vancomycin activity; **: nystatin activity.
Figure 1MTT assay results for compounds 17, 20, 21 and 22. MTT HT29: human colon adenocarcinoma cell line (ATCC No. HTB-38) MTT test results; MTT CCD 841 CoTr: human normal colon epithelial cells (ATCC No. CRL-1807) MTT test results.
Figure 2Graphs showing activity of compounds 17, 20, 21 and 22 during the neutral red uptake NR assay. NR HT29: human colon adenocarcinoma cell line (ATCC No. HTB-38) neutral red uptake NR assay results; NR CCD 841 CoTr: human normal colon epithelial cells (ATCC No. CRL-1807) neutral red uptake NR assay results.
Figure 3Nitric oxide (NO) measurement results for compounds 17, 20, 21, 22. HT29 Nitric oxide: human colon adenocarcinoma cell line (ATCC No. HTB-38) nitric oxide (NO) measurement results; CCD 841 CoTr Nitric oxide: human normal colon epithelial cells (ATCC No. CRL-1807) nitric oxide (NO) measurement results.
DPPH scavenging effect of tested compounds.
| Concentration | Reduction Value, which Corresponds to the following Trolox Concentration (μg/mL) | |||
|---|---|---|---|---|
| 17 | 20 | 21 | 22 | |
| Control | 0 | 0 | 0 | 0 |
| 25 | 2.037 ± 0.210 | 0.418 ± 0.154 | 0.264 ± 0.256 | 0.227 ± 0.205 |
| 75 | 2.472 ± 0.307 | 0.748 ± 0.512 | 1.060 ± 0.051 | 0.336 ± 0.263 |
| 150 | 3.558 ± 0.717 | 0.662 ± 0.410 | 1.241 ± 0.102 | 0.698 ± 0.154 |
| 200 | 2.725 ± 0.256 | 0.879 ± 0.768 | 2.037 ± 0.307 | 1.205 ± 0.870 |
The value of reduced DPPH radical by compounds (17, 20, 21, 22) is compared to the control (0% of reduction). As a control, methanol anhydrous, 99.8% was used. The results are presented as reduction values (μg/mL) corresponding to the appropriate concentration of Trolox.
Ferric-reducing antioxidant power assay (FRAP) results of tested compounds.
| Concentration | Reduction Value, which Corresponds to the following—Ascorbic Acid Concentration (μg/mL) | |||
|---|---|---|---|---|
| 17 | 20 | 21 | 22 | |
| Control | 0 | 0 | 0 | 0 |
| 25 | 0.81 ± 0.54 | 1.08 ± 0.54 | 0.54 ± 0.01 | 0.27 ± 0.14 |
| 75 | 0.81 ± 0.54 | 1.89 ± 0.27 | 0.81 ± 0.14 | 0.81 ± 0.27 |
| 150 | 1.08 ± 0.54 | 2.97 ± 1.89 | 1.35 ± 0.54 | 0.54 ± 0.14 |
| 200 | 1.35 ± 0.90 | 3.51 ± 1.35 | 1.62 ± 0.27 | 0.81 ± 0.14 |
The value of conversed Fe (III) to Fe (II) by compounds (17, 20, 21, 22) is compared to the control (0% of reduction). As a control, methanol anhydrous, 99.8% was used. The results are presented as reduction values (μg/mL) corresponding to the appropriate concentration of ascorbic acid.
Binding energies for compounds 13 and 25 (Escherichia coli Nitroreductase PDB code: 1YKI).
| Compound | 13 | 25 | Nitrofurazone | Nitrofuratoin |
|---|---|---|---|---|
| Binding Energy (kcal/mol) | −7.1 | −8.5 | −6.5 | −7.3 |
Figure 4Docked conformation of compound 13 with Nitroreductase (PDB code: 1YKI).
Figure 5Docked conformation of compound 25 with Nitroreductase (PDB code: 1YKI).
The binding energies for compounds 5, 13, 17 and 25 to dihydrofolate reductase (PDB code: 5ISP) and tyrosyl-tRNA synthetase (PDB code: 1JIJ).
| Comp./PDB code: | 5 | 17 | Ligand | 13 | 25 | Ligand |
|---|---|---|---|---|---|---|
|
| −7.5 | −7.7 | −9.5 | −6.9 | −8.2 | _ |
|
| −8.4 | −8.2 | _ | −8.8 | −8.9 | −8.7 |
Figure 6The interaction between compound 5 and tyrosyl-tRNA synthetase (PDB code: 1YKI).
Figure 7The interaction between compound 17 and tyrosyl-tRNA synthetase (PDB code: 1YKI).
Predicted properties of the most active compounds and two reference chemotherapeutics.
| Compounds | MW a | TPSA b | XlogP c | GA d | BBB e | LR f | TC g | LD50 h |
|---|---|---|---|---|---|---|---|---|
|
| 493.04 | 74.58 | 2.71 | High | Yes | Yes | 4 | 375 |
|
| 260.21 | 113.31 | 1.39 | High | No | Yes | 4 | 1500 |
|
| 535.08 | 75.02 | 2.82 | High | Yes | Yes, 1 violation | 5 | 2930 |
|
| 302.24 | 113.75 | 1.14 | High | No | Yes | 5 | 3200 |
|
| 331.34 | 74.57 | −1.08 | High | No | Yes | 4 | 2000 |
|
| 238.16 | 120.73 | −0.47 | High | No | Yes | 4 | 1000 |
a: molecular weight; b: topological polar surface area Å2; c: lipophilicity: computed by XlogP3 program; d: gastrointestinal adsorption; e: blood–brain barrier permeant; f: accordance to Lipinski rules; g: predicted toxicity class; h: predicted LD50 mg/kg.