| Literature DB >> 35267937 |
Minkyung Bae1,2, Mi-Bo Kim1, Ji-Young Lee1,3.
Abstract
We previously demonstrated that astaxanthin (ASTX), a xanthophyll carotenoid, has an antifibrogenic effect in hepatic stellate cells (HSC), primarily responsible for the accumulation of extracellular matrix protein during the development of liver fibrosis. Studies have shown that microRNAs (miRNAs) are involved in HSC activation. Therefore, we analyzed the expression of 84 miRNAs using miRNA arrays in primary mouse quiescent HSC (qHSC) and activated HSC (aHSC) treated with/without ASTX during their activation. Compared with qHSC, the expression of 14 miRNAs and 23 miRNAs was increased and decreased by more than 2-fold, respectively, in aHSC. Among the 14 miRNAs increased in aHSC, the expression of miR-192-5p, miR-382-5p, and miR-874-3p was reduced by ASTX. In addition, ASTX increased the expression of miR-19a-3p, miR-19b-3p, and miR-101a-3p among 23 miRNAs decreased in aHSC. Moreover, we confirmed miR-382-5p expression was ~15-fold higher in aHSC than qHSC, and ASTX markedly inhibited the induction measured by quantitative real-time PCR. We identified that the expression of Baz1a and Zfp462 from the predicted miR-382-5p target genes was significantly reduced in aHSC while increased by ASTX treatment similar to the levels in qHSC. The roles of Baz1a and Zfp462 in HSC activation and the antifibrogenic effect of ASTX need to be further investigated.Entities:
Keywords: astaxanthin; fibrogenesis; hepatic stellate cell; microRNA
Mesh:
Substances:
Year: 2022 PMID: 35267937 PMCID: PMC8912553 DOI: 10.3390/nu14050962
Source DB: PubMed Journal: Nutrients ISSN: 2072-6643 Impact factor: 5.717
Figure 1miRNA PCR array heatmaps. Primary mouse qHSC, aHSC, and aHSC treated with 25 µM of ASTX (aHSC + ASTX) were subjected to miRNA PCR array for mouse fibrosis. (A) Heatmaps of the miRNA array comparing miRNA profiles of aHSC vs. qHSC, and aHSC treated with ASTX (aHSC + ASTX) vs. aHSC. (B) Heatmap of miRNA expression in primary mouse HSC. Lanes 1, 2, and 3 show qHSC, aHSC, and aHSC + ASTX, respectively. The magnitude of expression is shown in the scale bar.
Figure 2Scatter plots of miRNA expressions by miRNA PCR array. The expression of 84 miRNAs and 6 small nucleolar RNAs as log10 (2^-DeltaCt) in primary mouse aHSC and in qHSC (A) and in aHSC + ASTX and aHSC (B). The midline indicates no difference in the expression between two groups, while lines above or under the midline indicate the boundary of 2-fold regulation in the expression. Red and green dots represent each miRNA or small nucleolar RNA, upregulated and downregulated, respectively.
Fold changes of the expression of miRNAs in primary mouse aHSC compared to qHSC. The lists of miRNAs overexpressed and underexpressed during HSC activation.
| Overexpressed | Fold Change | Underexpressed | Fold Change |
|---|---|---|---|
| miRNAs | (aHSC vs. qHSC) | miRNAs | (aHSC vs. qHSC) |
| mmu-miR-148a-3p | 17.35 | mmu-miR-122-5p | 0.02 |
| mmu-miR-192-5p | 9.83 | mmu-miR-126a-3p | 0.05 |
| mmu-miR-324-5p | 5.23 | mmu-miR-335-5p | 0.05 |
| mmu-miR-382-5p | 4.91 | mmu-miR-150-5p | 0.07 |
| mmu-miR-27b-3p | 4.31 | mmu-miR-19a-3p | 0.09 |
| mmu-miR-181b-5p | 3.91 | mmu-miR-19b-3p | 0.11 |
| mmu-miR-365-3p | 3.7 | mmu-miR-101a-3p | 0.13 |
| mmu-miR-744-5p | 2.9 | mmu-miR-200b-3p | 0.16 |
| mmu-miR-34a-5p | 2.63 | mmu-miR-146a-5p | 0.16 |
| mmu-miR-21a-5p | 2.58 | mmu-miR-223-3p | 0.18 |
| mmu-miR-125b-5p | 2.53 | mmu-miR-29b-3p | 0.19 |
| mmu-miR-15b-5p | 2.44 | mmu-miR-203-3p | 0.29 |
| mmu-miR-330-3p | 2.32 | mmu-miR-29a-3p | 0.3 |
| mmu-miR-874-3p | 2.14 | mmu-miR-338-5p | 0.31 |
| mmu-miR-3094-5p | 0.31 | ||
| mmu-miR-194-5p | 0.32 | ||
| mmu-miR-195a-5p | 0.34 | ||
| mmu-miR-29c-3p | 0.35 | ||
| mmu-miR-146b-5p | 0.37 | ||
| mmu-miR-143-3p | 0.39 | ||
| mmu-miR-129-5p | 0.43 | ||
| mmu-miR-17-5p | 0.45 | ||
| mmu-miR-322-5p | 0.47 |
Fold changes of the expression of miRNAs in primary mouse aHSC treated with ASTX compared with control aHSC 1.
| miRNAs | Fold Change | |
|---|---|---|
| Overexpressed | mmu-miR-138-5p | 29.75 |
| mmu-miR-19a-3p | 3.17 | |
| mmu-miR-101a-3p | 2.80 | |
| mmu-miR-19b-3p | 2.05 | |
| Underexpressed | mmu-miR-192-5p | 0.04 |
| mmu-miR-223-3p | 0.16 | |
| mmu-miR-150-5p | 0.33 | |
| mmu-miR-449a-5p | 0.37 | |
| mmu-miR-1a-3p | 0.37 | |
| mmu-miR-328-3p | 0.41 | |
| mmu-miR-874-3p | 0.42 | |
| mmu-miR-146b-5p | 0.43 | |
| mmu-miR-382-5p | 0.45 | |
| mmu-miR-3094-5p | 0.50 |
1 The lists of miRNAs overexpressed and underexpressed by ASTX treatment.
Figure 3The expression of miRNAs in primary mouse HSC. (A) The expression of miR-192-5p, miR-382-5p, miR-874-3p, miR-19a-3p, miR-19b-3p, and miR-101a-3p from miRNA array. (B) The expression of miR-192-5p, miR-382-5p, and miR-101a-3p measured by qRT-PCR. n = 3. Bars with a different letter are significantly different (p < 0.05). Mean ± SEM.
Figure 4The potential target genes of miR-382-5p in primary mouse HSC. (A) The expression of 12 target genes of miR-382-5p was analyzed by RNA sequencing in qHSC, aHSC, and aHSC treated with ASTX (aHSC + ASTX). Z-scores for the expression are shown in the scale bar. n = 4. (B) The expression of Hif3a, Crem, Baz1a, and Zfp462 measured by qRT-PCR. n = 6. Bars with a different letter are significantly different (p < 0.05). Mean ± SEM.
The potential target genes of miR-382-5p altered during HSC activation and ASTX treatment in HSC.
| Gene | Full Name | Function |
|---|---|---|
|
| Xin actin-binding repeat containing 2 | Xirp2 belongs to muscle-specific, actin-binding Xin gene family. It is expressed in cardiac and skeletal muscle interacting with filamentous actin and α-actinin via the actin-binding motif, the Xin repeat. |
|
| Histidine decarboxylase | HDC catalyzes the decarboxylation of histidine to form histamine. |
|
| Aldo-keto reductase family 1, member C6 | Akr1c6 encodes estradiol 17 β-dehydrogenase 5, which catalyzes the reduction of 4-androstenedione, 5-α-androstane-3,17-dione, androsterone and dehydroepiandrosterone to testosterone, dihydrotestosterone, 5-α-androstane-3-α,17-β-diol, and 5-androstene-3-β,17-β-diol, respectively. |
|
| Family with sequence similarity 169, member A | Soluble lamina-associated protein of 75 kD. |
|
| Elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 | ELOVL2 is a condensing enzyme catalyzing the elongation of long-chain polyunsaturated fatty acids. |
|
| Fibronectin leucine rich transmembrane protein 3 | FLRT3 is involved in cell–cell adhesion, cell migration, and axon guidance. |
|
| Exocyst complex component 6 | EXOC6 is a component of the exocyst complex involved in vesicle trafficking, specifically the tethering of secretory vesicles to the plasma membrane during exocytosis. |
|
| Hypoxia inducible factor 3, alpha subunit | HIF3A belongs to the transcription factor family of hypoxia-inducible factors, which regulate the cellular response to hypoxia. |
|
| Yy2 transcription factor | Yy2 acts as a multifunctional transcription factor regulating a large number of genes positively and negatively. It is involved in development and differentiation. |
|
| cAMP responsive element modulator | CREM is a component of cAMP-mediated signal transduction during various physiological processes, including spermatogenesis, cardiac function, and circadian rhythm. |
|
| Bromodomain adjacent to zinc finger domain 1A | BAZ1A is the accessory, noncatalytic subunit of the ATP-dependent chromatin assembly factor, which regulates spacing of nucleosomes using ATP to form evenly spaced nucleosomes along the chromatin. |
|
| Zinc finger protein 462 | ZFP462 or ZNF462 belongs to C2H2-type zinc finger family of proteins. |