Literature DB >> 35267236

Disproportionation of Nitric Oxide at a Surface-Bound Nickel Porphyrinoid.

Matus Stredansky1,2, Stefania Moro1, Manuel Corva1,2, Henning Sturmeit3, Valentin Mischke3, David Janas3, Iulia Cojocariu4, Matteo Jugovac4, Albano Cossaro2,5, Alberto Verdini2, Luca Floreano2, Zhijing Feng1,2, Alessandro Sala2, Giovanni Comelli1,2, Andreas Windischbacher6, Peter Puschnig6, Chantal Hohner7, Miroslav Kettner7, Jörg Libuda7, Mirko Cinchetti3, Claus Michael Schneider4,8, Vitaliy Feyer4,8, Erik Vesselli1,2, Giovanni Zamborlini3,4.   

Abstract

Uncommon metal oxidation states in porphyrinoid cofactors are responsible for the activity of many enzymes. The F430 and P450nor co-factors, with their reduced NiI - and FeIII -containing tetrapyrrolic cores, are prototypical examples of biological systems involved in methane formation and in the reduction of nitric oxide, respectively. Herein, using a comprehensive range of experimental and theoretical methods, we raise evidence that nickel tetraphenyl porphyrins deposited in vacuo on a copper surface are reactive towards nitric oxide disproportionation at room temperature. The interpretation of the measurements is far from being straightforward due to the high reactivity of the different nitrogen oxides species (eventually present in the residual gas background) and of the possible reaction intermediates. The picture is detailed in order to disentangle the challenging complexity of the system, where even a small fraction of contamination can change the scenario.
© 2022 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.

Entities:  

Keywords:  2D Materials; Biomimetic Materials; Disproportionation; Nitrogen Monoxide; Porphyrins; Single-Atom Catalysts

Mesh:

Substances:

Year:  2022        PMID: 35267236      PMCID: PMC9314816          DOI: 10.1002/anie.202201916

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   16.823


Introduction

Enzymes are considered as a blueprint for novel synthetic catalysts that emulate their binding selectivity and high efficiency. The key constituents of several enzymatic reaction centers involved e.g. in methanogenesis, catalytic oxidation, and nitric‐oxide reduction are metal‐containing tetrapyrroles. Nitric oxide reductase (NOR) enzymes, such as NorBC and cytochrome P450, take also advantage of the selectivity provided by these single metal atom cores and by the electronic and geometric architecture surrounding the reactive site. One of the mechanisms proposed in the description of the NO conversion process in NOR involves, in the intermediate step, the formation of a hyponitrite (N2O2) moiety, resulting from the coupling of two NO molecules. This elusive species is hard to stabilize and detect directly.[ , ] The production of nitrous oxide (N2O) by engineered myoglobins is found instead to proceed through a nitrosyl dimer (NO)2. More generally, when looking at the mechanistic aspects of the reactions of nitric oxide, either with transition metal (TM) complexes or at surfaces, it is observed that homomolecular reactions involve disproportionation mechanisms covering a variety of pathways and products.[ , ] In the former case (TM complexes), the atom transfer processes observed at Ni, Cu, Fe, Mn, and Ru centers can involve 3 to 4 NO molecules, yielding N2O+NO2 or N2+2 NO2, respectively. Conversely, in the case of surfaces, atomic products can be easily accommodated, thus opening the way to additional parallel or competing paths. NO adsorption and reaction at Cu single crystal terminations in Ultra‐High Vacuum (UHV) yield adsorbed atomic O and N, together with N2O, NO2, NO3, and N2O4 already below 110 K.[ , , , ] The origin of the complex chemistry of NO partly arises from its electronic structure, with an unpaired electron in its 2π* orbital, so that the molecule can act both as an electron donor or as an acceptor. However, this represents an oversimplified picture that does not account for many observations, e.g. reaction paths that involve NO dimers (NO)2 or hyponitrite intermediates (N2O2), making a thorough comprehension of this molecule's chemistry quite puzzling. Furthermore, experimental investigations involving NO as a reactant are challenging due to the presence of other N oxides as trace contaminants in the gas sources, thus making precise and clean measurements very complex, both in surface science and biochemistry.[ , ] In the latter case, the first single‐site heterogeneous material to promote NO disproportionation into N2O and NO2 was reported only recently. The process was found to occur with low rate at Fe sites already at room temperature. Computational investigations of the observed 3 NO→N2O+NO2 reaction confirmed the role of a monoanionic hyponitrite radical intermediate in an exothermic pathway (3 eV) to gaseous N2O and adsorbed NO2 at the Fe site.[ , ] In a biomimetic picture at surfaces, novel model systems for heterogeneous catalysis may be built by exploiting tetrapyrrolic compounds,[ , ] such as metal‐containing tetraphenyl porphyrins (MTPP). MTPP form a rich variety of 2‐dimensional self‐assembled structures when adsorbed at proper templating surfaces. These supramolecular assemblies act as a network, stabilizing ordered arrays of single metal atom active sites.[ , ] In fact, within the macrocycle moiety of the porphyrin, the incorporated transition metal is considered a single‐atom catalyst (SAC), which offers axial coordination for the anchoring of ligands,[ , ] and for the chemical conversion of small molecules.[ , , ] In the specific case of NO adsorption at 2D arrays of surface‐supported porphyrins, it is commonly accepted that only a single NO molecule coordinates to the metal center under UHV conditions.[ , , , ] In the present work, instead, we present the results obtained upon exposure of a Ni tetraphenyl porphyrin (NiTPP) film deposited on the Cu(100) surface to NO at room temperature, providing a first evidence of NO disproportionation observed at tetrapyrroles in UHV, yielding the NO2‐NiTPP complex. By means of vibronic and vibrational spectroscopies and scanning tunneling microscopy (STM), we unequivocally identify the ligand coordinated with the Ni atom of the porphyrin to be the NO2 molecule. Independent photoemission‐based experiments allow to draw the same conclusions. Density Functional Theory (DFT) calculations indicate that the disproportionation reaction path (3 NO→NO2+N2O) is extremely exothermic so that the formation of the NO2‐NiTPP complex is energetically favorable, although kinetically hindered, being a high order reaction. In the following we will report in detail the results obtained by means of each of the many techniques, both experimental and theoretical, that we exploited to investigate this complex system (see Supporting Information for further details about the adopted methodologies). We will also discuss our observations in light of the well‐known, unavoidable, and non‐trivial issues associated with the role of contaminants in NO experiments, critically considering the role of pathways including: i) NO2 contamination of the NO bottles, ii) NO2 formation at the UHV chamber walls, iii) NO2 formation at the Cu substrate, iv) NO2 formation at the single‐atom Ni sites.

Results and Discussion

It has been demonstrated that the charge transfer taking place at the NiTPP/Cu(100) interface yields population of the molecular orbitals up to the LUMO+3, strongly affecting the metal oxidation state. This results in a unique electronic configuration of the single metal atom site with potentially high reactivity, associated with thermal stabilization and a strong surface trans‐effect. NiTPP molecules self‐assemble on the Cu(100) surface at monolayer coverage forming two long‐range ordered domains that are commensurate with the underlying substrate. Infrared‐Visible Sum‐Frequency Generation (IR‐Vis SFG) and Infrared Reflection Absorption Spectroscopy (IRAS) spectra reveal the presence of several resonances (Figure 1a, b, top), associated with the vibrational modes of the different porphyrin moieties (Table 1),[ , , ] in agreement with previous observations. When exposing the system to NO, a sharp and intense resonance grows in the IR‐Vis SFG spectra at 1319 cm−1 (Figure 1a, middle, red envelope), evolving both in amplitude and phase with NO exposure (101–103 L) and showing a lineshape dependence on the initial NiTPP surface coverage (Figures S1, S2, Tables S1–S5). IRAS spectra confirm the growth of a strong absorption feature at the same energy (Figure 1b, middle, red envelope), indicating a strong dipole mode with a significant component in the direction orthogonal to the surface plane. However, the stretching contribution of terminal NO would be expected above 1700 cm−1. Comparison with literature data leads instead to an unexpected conclusion, associating the vibration at 1319 cm−1 with the asymmetric stretch of an adsorbed NO2 species. As a counter experiment, we expose the pristine NiTPP monolayer at room temperature directly to 1 L of NO2. The growth of the same features is readily observed both in IR‐Vis SFG and IRAS experiments (Figure 1a, b, bottom, cyan envelopes, and Figure S3). By comparing the STM images acquired before and after the NO uptake, we note that the dark depression at the macrocycle center, which is associated with the Ni atom,[ , ] is replaced with a bright protrusion (Figure 1c), similarly to what has been observed upon direct exposure to NO2 (Figure S4). The NO2 ligand coordinates to the Ni atom at the center of the macrocycle, as further confirmed by the STM d2I/dV2 maps. Inelastic Electron Tunneling Spectroscopy localizes indeed the mode low‐frequency mode (Figure 1d) and the mode detected by means of both IR‐Vis SFG and IRAS (Figure 1f) on top of the Ni atoms, whereas no vibrational feature was localized at intermediate bias (Figure 1e). The scenario depicted above is confirmed by X‐ray Photoemission Spectroscopy (XPS) (Figure S5). The main Ni 2p 3/2 peak at a binding energy of 852.9±0.3 eV, assigned to the core level of the central Ni ion in a formal +1 oxidation state of the pristine system,[ , ] is progressively replaced by a new feature at higher binding energy (854.6±0.3 eV) after exposure of the NiTPP film to NO or, equivalently, to NO2. The observed binding energy shift witnesses the NO2‐induced oxidation of the nickel atom, confirming ligation at the single metal atom site. Consistently, while the N 1s spectrum of the pristine NiTPP‐covered surface shows a single, sharp peak at 398.65±0.2 eV, assigned to the four equivalent nitrogen atoms of the macrocycle,[ , ] a new spectral feature adds at 402.55±0.2 eV upon exposure of the molecular film to NO or NO2, associated with the N atom of the NO2 ligand. As both vibrational and electronic properties are unique for the specific molecule, all experimental techniques therefore point towards the adsorption of NO2 at the NiTPP/Cu(100) layer, even after exposure to NO.
Figure 1

a) IR‐Vis SFG spectra of a pristine NiTPP/Cu(100) monolayer at room temperature before (top) and after exposure to NO (middle) and to NO2 (bottom). For the IR‐Vis SFG (IRAS) experiment the layer was exposed to 6×102 L (5×102 L) of NO and to 1 L (1.44 L) of NO2, respectively. Data are shown (grey markers) together with the best fit (black lines) and deconvolution (filled profiles) obtained according to the lineshape described in the Supporting Information. b) IRAS spectra corresponding to the IR‐Vis SFG spectra in (a). c) Constant‐height topographic STM image of the NiTPP/Cu(100) after saturation with NO with superimposed NiTPP models (bias +140 mV; bar corresponds to 2 nm). d–f) Inelastic electron tunneling d2I/dV2 maps at constant height of the same zone in (c) collected at 20, 140, and 170 mV bias, respectively.

Table 1

Deconvolution parameters and assignment, according to the literature,[ , , ] of the IR‐Vis SFG resonances observed for the pristine monolayer of NiTPP/Cu(100) and of observed IRAS absorption lines for the same system (see Supporting Information for further data and details); in the bottom part of the table, IR‐Vis SFG and IRAS features specifically induced by the reaction with NO are reported.

This work

Literature

Literature

IRAS

IR‐Vis SFG

Phenyl Modes

Macrocycle Modes

ω [cm−1]

ω [cm−1]

Δϕ [°]

ω [cm−1]

Assignment

ω [cm−1]

Assignment

1063

1050–1071

in‐plane, out‐of‐plane

δ(Cβ‐H)sym

1150

1152–1158

out‐of‐plane

1172

1177

in‐plane

1190

δ(Cβ‐H)asym

1276–1279

288

1269

δ(CH)

1269

ν(Cm‐Ph), ν(NCα)

1304–1305

350

1302

ν(pyr half‐ring), ν(NCα), ν(CαCβ)

1319

1315–1319

224

1317, 1318

out‐of‐plane B1u, A2u

1313

ν(pyr quarter‐ring)

1434

1434

246

1438

out‐of‐plane B1u

1436–1437

97

1440

out‐of‐plane A2u

1481

1482–1483

215

1470

δ(CCH), ν(CC)

1470, 1473, 1485

ν(CαCm)sym, ν(CβCβ), ν(NCα), ν(CαCβ)

1571

1573

105

1576, 1583, 1586

ν(CC), out‐of‐plane Eg, B1u, A2u

1572

ν(CβCβ), ν(CαCm), δ(CαCm)

1592

1593

238

1586

out‐of‐plane A2u

1586, 1594

ν(CαCm)sym, ν(CαCm)asym, δ(CαCmPh)

2856

280

2907

295

3007

87

3039, 3047, 3063, 3068, 3069, 3071, 3073, 3075

ν(CH), out‐of‐plane Eg, B1u, A2u

3047

3046

97

3069

3069

131

3086

155

This work—NO Uptake

Literature

IRAS

IR‐Vis SFG

ω [cm−1]

ω [cm−1]

Δϕ [°]

ω [cm−1]

Assignment

1319

1319

7

1304–1311

NO2 asymm. Stretch

1365

250

1374, 1377

(only above ≈103 L NO) ν(pyr quarter/half‐ring)

1602

215

1594, 1599

(only above ≈103 L NO) ν(CαCm)asym, in‐plane phenyl

3097–3101

45

3095–3100

ν(CH) in‐plane

a) IR‐Vis SFG spectra of a pristine NiTPP/Cu(100) monolayer at room temperature before (top) and after exposure to NO (middle) and to NO2 (bottom). For the IR‐Vis SFG (IRAS) experiment the layer was exposed to 6×102 L (5×102 L) of NO and to 1 L (1.44 L) of NO2, respectively. Data are shown (grey markers) together with the best fit (black lines) and deconvolution (filled profiles) obtained according to the lineshape described in the Supporting Information. b) IRAS spectra corresponding to the IR‐Vis SFG spectra in (a). c) Constant‐height topographic STM image of the NiTPP/Cu(100) after saturation with NO with superimposed NiTPP models (bias +140 mV; bar corresponds to 2 nm). d–f) Inelastic electron tunneling d2I/dV2 maps at constant height of the same zone in (c) collected at 20, 140, and 170 mV bias, respectively. Deconvolution parameters and assignment, according to the literature,[ , , ] of the IR‐Vis SFG resonances observed for the pristine monolayer of NiTPP/Cu(100) and of observed IRAS absorption lines for the same system (see Supporting Information for further data and details); in the bottom part of the table, IR‐Vis SFG and IRAS features specifically induced by the reaction with NO are reported. This work Literature Literature IRAS IR‐Vis SFG Phenyl Modes Macrocycle Modes ω [cm−1] ω [cm−1] Δϕ [°] ω [cm−1] Assignment ω [cm−1] Assignment 1063 1050–1071 in‐plane, out‐of‐plane δ(Cβ‐H)sym 1150 1152–1158 out‐of‐plane 1172 1177 in‐plane 1190 δ(Cβ‐H)asym 1276–1279 288 1269 δ(CH) 1269 ν(Cm‐Ph), ν(NCα) 1304–1305 350 1302 ν(pyr half‐ring), ν(NCα), ν(CαCβ) 1319 1315–1319 224 1317, 1318 out‐of‐plane B1u, A2u 1313 ν(pyr quarter‐ring) 1434 1434 246 1438 out‐of‐plane B1u 1436–1437 97 1440 out‐of‐plane A2u 1481 1482–1483 215 1470 δ(CCH), ν(CC) 1470, 1473, 1485 ν(CαCm)sym, ν(CβCβ), ν(NCα), ν(CαCβ) 1571 1573 105 1576, 1583, 1586 ν(CC), out‐of‐plane Eg, B1u, A2u 1572 ν(CβCβ), ν(CαCm), δ(CαCm) 1592 1593 238 1586 out‐of‐plane A2u 1586, 1594 ν(CαCm)sym, ν(CαCm)asym, δ(CαCmPh) 2856 280 2907 295 3007 87 3039, 3047, 3063, 3068, 3069, 3071, 3073, 3075 ν(CH), out‐of‐plane Eg, B1u, A2u 3047 3046 97 3069 3069 131 3086 155 This work—NO Uptake Literature IRAS IR‐Vis SFG ω [cm−1] ω [cm−1] Δϕ [°] ω [cm−1] Assignment 1319 1319 7 1304–1311 NO2 asymm. Stretch 1365 250 1374, 1377 (only above ≈103 L NO) ν(pyr quarter/half‐ring) 1602 215 1594, 1599 (only above ≈103 L NO) ν(CαCm)asym, in‐plane phenyl 3097–3101 45 3095–3100 ν(CH) in‐plane In the case of larger exposures to NO, (>103 L), the IR‐Vis SFG resonance lineshape at 1319 cm−1 considerably evolves due to a phase rotation (Figure S2 and Tables S1–S3). The latter is accompanied by the appearance of additional resonances associated with the NiTPP molecules at 1365, 1602, and at about 3100 cm−1. This behavior is explained by a distortion of the macrocycle and phenyl moieties, yielding a change in the orientation of the dipole moments pertaining to the corresponding vibrational modes (see Table 1). The relative phase rotation of the spectroscopic resonances with respect to the non‐resonant background reflects a change of the density of states in an energy range around the Fermi level that is compatible with the visible photon energy (532 nm, 2.33 eV) exploited in the measurements.[ , , ] The modifications induced in the IR‐Vis SFG NiTPP resonances by large doses of NO are in line with what previously observed for adsorption of NiTPPs directly on an oxygen pre‐covered Cu(100) termination, associated with a decoupling effect induced by the underlying (2√2×√2)R45°‐O/Cu(100) superstructure. Thus, we observe the parallel, progressive oxidation of the supporting Cu(100) surface occurring with prolonged exposures to NO (of the order of 103 L) of the NiTPP/Cu(100) system. XPS measurements of the O 1s core level (Figures S5, S6) agree with the oxygen‐induced passivation of the copper surface. Indeed, whereas it is straightforward that the as‐deposited NiTPP film does not show any trace of oxygen, after exposing the molecular layer to NO (NO2), two components grow at 531.1 and 529.7±0.2 (530.1±0.2) eV, with very different relative intensities. By comparing the data with the exposure of the bare Cu(100) surface, on which NO is known to dissociate readily (Figure S6), we conclude that the high binding energy feature is associated with the NO2 ligand at the Ni sites, while the low energy peak is assigned to atomic O at the copper surface, with binding energy shifts depending on the O coverage.[ , , ] The actual intensity ratio of the two O 1s components—NO2/NiTPP vs. O/Cu(100)—is ultimately determined by i) the initial NiTPP coverage, eventually leaving bare Cu(100) islands when less than a monolayer is deposited, and ii) by the degree of oxidation of the Cu substrate that is reached upon prolonged exposures, in perfect agreement with the IR‐Vis SFG and IRAS (Figure S7) results. Accordingly, we exclude formation of NO2 at the bare Cu(100) termination. As pinpointed in the introduction, the chemistry of nitrogen oxides deserves particular attention due to the high reactivity of these molecules, in association with the possible presence/formation of contaminants during the experiment. The IR‐Vis SFG, IRAS, STM, and XPS measurements presented here were performed in different setups (see Methods), using different NO bottles and with different NO purification and handling recipes, nevertheless always yielding the same conclusions, i.e. the formation of NO2 at the Ni sites after exposure of the NiTPP/Cu(100) layer to NO at room temperature. Concerning the results presented here, the remaining alternative interpretation pathways are: i) since there is no way to get rid of NO2 contamination, always present in NO bottles, and considering the extremely NO2 high sticking coefficient, impurities of the order of 0.1 % or even less could give rise to a signal intensity (XPS, VB, IR‐Vis SFG, IRAS) or STM features compatible with the observed ones; ii) NO reacts at the internal walls of the UHV setups, generating a whole family of nitrogen oxides,[ , , , , , ] including NO2 that ultimately sticks at the sample's surface; iii) NO disproportionation effectively occurs at the Ni sites of the single‐atom biomimetic catalyst layer. Despite the large set of experimental techniques and approaches adopted up to here, yet it was not possible to discriminate among the possible different pathways. Thus, to address this issue, we designed a combined experiment that was performed independently in two different experimental setups by means of time‐dependent IR‐Vis SFG and Valence Band (VB) measurements, respectively. In particular, the evolution of the NiTPP/Cu(100) monolayer was followed as a function of time during a series of NO uptakes performed at room temperature and different (constant) pressure values. IR‐Vis SFG spectra were collected in situ in NO background in the 1280–1340 cm−1 range (Figure S8a) to monitor the evolution of the resonance at 1319 cm−1, associated with the formation/adsorption of NO2. Several uptakes were performed at different NO background pressure values (Figure S8b) and the initial NO2 formation rate was measured. Similarly, but independently, the same information was obtained by stepwise exposures to NO alternating with VB measurements in UHV (Figures S9, S10). The combined results (empty and filled markers) reported in Figure 2 both as a function of pNO and pNO 2, reveal that the NO uptake rate is non‐linear as a function of the reactant pressure, so that the NO2 formation rate is proportional to the square of pNO. This supports a disproportionation process, in the direction of excluding a possible role of contaminants in the gas sources.
Figure 2

Combined IR‐Vis SFG (empty markers) and VB (filled markers) data of the NO uptakes on a NiTPP/Cu(100) monolayer at RT, showing the NO2/NiTPP formation rate as a function of the NO uptake background pressure (a) and pressure squared (b).

Combined IR‐Vis SFG (empty markers) and VB (filled markers) data of the NO uptakes on a NiTPP/Cu(100) monolayer at RT, showing the NO2/NiTPP formation rate as a function of the NO uptake background pressure (a) and pressure squared (b). So far, we have narrowed our potential NO2 source down disproportionation reactions at the UHV chamber walls or at our Ni‐catalyst layer. At this point, further corroboration comes from theory. We performed a thorough set of ab initio calculations within the framework of Density Functional Theory (DFT) to shed light on the proposed NO disproportionation mechanism (Figure 3 and Tables S6–S8. Following pathways similar to those suggested for NO conversion in metal‐organic biochemical systems,[ , , , , ] our set includes different NO intermediates along the stepwise addition of NO to the Ni site (Figure 3a). Of course, not all intermediates are expected to be observable and to yield a sizeable surface coverage, depending on the configuration lifetime in relation with reaction barriers and other kinetic parameters (pre‐exponentials, coverage, reactant pressure and temperature, surface temperature…). After the adsorption of the first NO molecule, we assume formation of the (NO)2 dimer,[ , , , ] which is firstly converted into hyponitrite and then to NO2 (and N2O) consuming a third NO. We start by discussing the influence of both the NiTPP complex and the Cu‐surface on such a pathway and link the observations to the changes induced in the ligated NO species. Table 2 compares the bond lengths of NO, (NO)2, and NO2 in different environments. In absence of the surface trans‐effect, i.e. without the Cu surface below the porphyrin, the ligands are negligibly influenced, nor geometrically distorted by the NiTPP molecule (Table 2, rows 1 and 2). Accordingly, the local magnetic moments and projected density of states resemble the isolated NO and NiTPP species (Table S6). This behavior is preserved also when including an oxygen reconstructed Cu‐surface in the simulations (3rd row of Table 2), which in turn underlines the capability of decoupling porphyrin and surface by oxygen passivation, as recently observed.[ , ] On the metallic Cu(100) surface, however, the situation is fundamentally different due to the strong trans‐effect, associated with charge transfer from the substrate to the metal–organic complex, with the Ni atom changing from a formally d 8 to a d 9 configuration. The increased electron density at the Ni center allows for electron donation from the Ni d‐orbital to an empty π*‐antibonding orbital of the NO ligand. Thus, in the simulations, the NO ligands are better described as their anionic counterparts. As common for such a π‐back‐bonding, the Ni−NO bond is strengthened, while the ligand's NiN−O bonds are weakened compared to the gas phase (or to the oxygen‐passivated) case. In terms of bond lengths, this is reflected in a severe decrease of the Ni−NO distance from 2.2 to 2.0 Å, accompanied by an increased NiN−O bond length for all species. NO is found to coordinate in a bent conformation, which is often seen as characteristic for an increased anionic character of the ligand in metal‐nitrosyl complexes. Note that the fundamental role of Cu(100) in enabling charge donation towards a Ni d 9 configuration is further confirmed by simulations of the charged NO /NiTPP complex in the gas phase, yielding similar geometric distortions when compared to the neutral counterpart. The most intriguing effect of back‐bonding, however, can be observed for the adsorption of the (NO)2 dimer. In the gas phase, the weak interaction between the two NO moieties results in an unusually long N−N distance of 2 Å. This weak bonding in the dimer remains unchanged upon interaction with a Ni d 8 center. However, upon adding an additional electron to the metal, thus taking into account the charge transfer induced by the metallic Cu surface, the N−N distance decreases to 1.6 Å, stabilizing a monoanionic hyponitrite (N2O2 −) species.[ , ] While formation of (NO)2 is hardly observed at ambient conditions, the stabilization of a hyponitrite intermediate is a reasonable first step in the NO disproportionation reaction. Note that (NO)2 as well as N2O2 may be present in their cis‐ or trans‐configurations with the corresponding isomers close in energy. The already bent coordination of the first NO at the Ni center may initially facilitate the adsorption of the second NO in a cis‐configuration. However, we cannot explicitly conclude the occurrence of a (short‐lived) di‐nitrosyl species at NiTPP, making a clear distinction between Langmuir–Hinshelwood and Eley–Rideal reaction mechanisms hard to address. A possible pathway could then include the isomerization to the trans‐form and reaction with a third NO, similarly to what proposed for other systems. The energetic consequence of the π‐back‐bonding capability of the active NiTPP/Cu(100) phase (at variance with the NiTPP/O/Cu(100) case) is the increasingly favorable adsorption of each NO species along the reaction coordinate (Figure 3b and Table S7). The calculated NO adsorption energies point toward an increased fixation of each species at the Ni center, which in turn facilitates the addition of the next NO. Independently, inferred from the relative electronic energies, the thermodynamic equilibrium of the reaction 3 NO→NO2+N2O favors NO disproportionation (compare lines in Table S8), although in the gas phase this reaction is kinetically hindered. A full mechanistic study is, however, beyond the scope of this work, especially as many intermediates are expected to be short‐lived, hard to access, and thus difficult to detect experimentally. Regardless of the exact pathway, NO2 is anyway formed along the way together with possible side products such as N2O or N2. In contrast to NO2, those side products, however, do not interact with the Ni d 9 center, with equilibrium N−Ni distances beyond 3 Å in our calculations. While the calculations do not specifically exclude the formation of NO2 at the chamber walls, the show the increasing stabilization of possible disproportionation intermediates at the NiTPP due to the unique electronic configuration of the Ni center. Moreover, our calculations support the experimental finding of stable NO2 as a result of NO conversion, while other reaction products go undetected.
Figure 3

a) Reaction pathway for NO disproportionation catalyzed by NiTPP/Cu(100) as suggested by DFT calculations: bond lengths obtained from the lowest energy configurations are indicated (see Table 2 for further details). Atoms color coding: oxygen (red), nitrogen (cyan), nickel (green), copper (orange). b) Calculated adsorption energies (eV—PBE‐D3/VASP) of NO species to NiTPP on the clean and passivated Cu surface.

Table 2

Bond lengths (Å) of gas phase and adsorbed NO and (NO )‐NiTPP species calculated with PBE+D3/VASP. In the coordinated hyponitrite species, the two N−O bonds are not equivalent anymore: Here (*), the N−O distance is given for the Ni‐coordinated N, while the second N−O bond is 1.22 Å.

NO

cis‐(NO)2

NO2

N−O

N−Ni

N−O

N−N

N−Ni

N−O

N−Ni

NOx

1.17

1.18

2.00

1.21

NOx‐NiTPP

1.17

2.17

1.19

1.96

2.40

1.23

2.23

NOx‐NiTPP/O/Cu(100)

1.18

2.21

1.18

1.98

2.26

1.24

2.21

NOx‐NiTPP/Cu(100)

1.20

1.94

1.23 (*)

1.58

1.99

1.25

2.00

a) Reaction pathway for NO disproportionation catalyzed by NiTPP/Cu(100) as suggested by DFT calculations: bond lengths obtained from the lowest energy configurations are indicated (see Table 2 for further details). Atoms color coding: oxygen (red), nitrogen (cyan), nickel (green), copper (orange). b) Calculated adsorption energies (eV—PBE‐D3/VASP) of NO species to NiTPP on the clean and passivated Cu surface. Bond lengths (Å) of gas phase and adsorbed NO and (NO )‐NiTPP species calculated with PBE+D3/VASP. In the coordinated hyponitrite species, the two N−O bonds are not equivalent anymore: Here (*), the N−O distance is given for the Ni‐coordinated N, while the second N−O bond is 1.22 Å. NO cis‐(NO)2 NO2 N−O N−Ni N−O N−N N−Ni N−O N−Ni NOx 1.17 1.18 2.00 1.21 NOx‐NiTPP 1.17 2.17 1.19 1.96 2.40 1.23 2.23 NOx‐NiTPP/O/Cu(100) 1.18 2.21 1.18 1.98 2.26 1.24 2.21 NOx‐NiTPP/Cu(100) 1.20 1.94 1.23 (*) 1.58 1.99 1.25 2.00

Conclusion

We have reported experimental evidence, obtained by exploiting several, independent approaches, that a stable NO2 species forms at the Ni sites at room temperature upon exposure of a NiTPP/Cu(100) monolayer to NO. The presence and stability of the ligand is solid and was proven by means of a counter‐experiment, where NO2 was directly dosed. However, we analyzed in detail the NO2 formation pathway by considering all possible routes, starting from contribution of the Cu(100) substrate, gas contamination, reactivity of the walls of the experimental setups, and ending by considering the effective catalytic activity of the SAC Ni sites. The NO uptake was characterized by a quantitative analysis of the NO2 formation rates as a function of the NO exposure conditions. As a consequence, we could disentangle the mechanism of NO2 formation from any interpretation due to possible NO2 residual contamination, putting in evidence the tough challenges related with nitrogen oxides and their reaction products associated with the misinterpretation of experimental results. We conclude that NO2 origins through a disproportionation mechanism. Nevertheless, despite the adoption of many gimmicks (pre‐conditioning of the UHV setup, gas sniffer, different gas line materials, lines flushing, traps, different pressure gauges…), still, a contribution from the chamber walls could not be ultimately ruled out. Together with the support of ab initio simulations, we propose an atomistic model of the reaction that is compatible with our observations. It is based on the initial step of coordination of one nitric oxide molecule to the NiI reactive site, followed by the intermediate capture of two additional NO molecules, and by the final release of N2O, which leaves a stable NO2 molecule at the Ni site. This model paves the way towards further investigations on NO disproportionation at biomimetic single‐atom sites within the framework of surface science.

Conflict of interest

The authors declare no conflict of interest. As a service to our authors and readers, this journal provides supporting information supplied by the authors. Such materials are peer reviewed and may be re‐organized for online delivery, but are not copy‐edited or typeset. Technical support issues arising from supporting information (other than missing files) should be addressed to the authors. Supporting Information Click here for additional data file.
  36 in total

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Authors:  Chenyue Sun; Luming Yang; Manuel A Ortuño; Ashley M Wright; Tianyang Chen; Ashley R Head; Núria López; Mircea Dincă
Journal:  Angew Chem Int Ed Engl       Date:  2021-03-01       Impact factor: 15.336

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Authors:  L Dalstein; A Revel; C Humbert; B Busson
Journal:  J Chem Phys       Date:  2018-04-07       Impact factor: 3.488

3.  Understanding the role of hyponitrite in nitric oxide reduction.

Authors:  Ashley M Wright; Trevor W Hayton
Journal:  Inorg Chem       Date:  2015-04-30       Impact factor: 5.165

4.  N2O Formation via Reductive Disproportionation of NO by Mononuclear Copper Complexes: A Mechanistic DFT Study.

Authors:  Sebastian Metz
Journal:  Inorg Chem       Date:  2017-03-14       Impact factor: 5.165

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Authors:  Wolfgang Hieringer; Ken Flechtner; Andreas Kretschmann; Knud Seufert; Willi Auwärter; Johannes V Barth; Andreas Görling; Hans-Peter Steinrück; J Michael Gottfried
Journal:  J Am Chem Soc       Date:  2011-04-04       Impact factor: 15.419

6.  Structural basis of biological N2O generation by bacterial nitric oxide reductase.

Authors:  Tomoya Hino; Yushi Matsumoto; Shingo Nagano; Hiroshi Sugimoto; Yoshihiro Fukumori; Takeshi Murata; So Iwata; Yoshitsugu Shiro
Journal:  Science       Date:  2010-11-25       Impact factor: 47.728

7.  NO disproportionation at a mononuclear site-isolated Fe(2+) center in Fe(2+)-MOF-5.

Authors:  Carl K Brozek; Jeffrey T Miller; Sebastian A Stoian; Mircea Dincă
Journal:  J Am Chem Soc       Date:  2015-06-02       Impact factor: 15.419

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Journal:  Nat Commun       Date:  2010-08-24       Impact factor: 14.919

9.  Nonlinear optical response of a gold surface in the visible range: A study by two-color sum-frequency generation spectroscopy. II. Model for metal nonlinear susceptibility.

Authors:  B Busson; L Dalstein
Journal:  J Chem Phys       Date:  2018-07-21       Impact factor: 3.488

10.  Multi-orbital charge transfer at highly oriented organic/metal interfaces.

Authors:  Giovanni Zamborlini; Daniel Lüftner; Zhijing Feng; Bernd Kollmann; Peter Puschnig; Carlo Dri; Mirko Panighel; Giovanni Di Santo; Andrea Goldoni; Giovanni Comelli; Matteo Jugovac; Vitaliy Feyer; Claus Michael Schneider
Journal:  Nat Commun       Date:  2017-08-25       Impact factor: 14.919

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1.  Disproportionation of Nitric Oxide at a Surface-Bound Nickel Porphyrinoid.

Authors:  Matus Stredansky; Stefania Moro; Manuel Corva; Henning Sturmeit; Valentin Mischke; David Janas; Iulia Cojocariu; Matteo Jugovac; Albano Cossaro; Alberto Verdini; Luca Floreano; Zhijing Feng; Alessandro Sala; Giovanni Comelli; Andreas Windischbacher; Peter Puschnig; Chantal Hohner; Miroslav Kettner; Jörg Libuda; Mirko Cinchetti; Claus Michael Schneider; Vitaliy Feyer; Erik Vesselli; Giovanni Zamborlini
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-21       Impact factor: 16.823

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