| Literature DB >> 35267236 |
Matus Stredansky1,2, Stefania Moro1, Manuel Corva1,2, Henning Sturmeit3, Valentin Mischke3, David Janas3, Iulia Cojocariu4, Matteo Jugovac4, Albano Cossaro2,5, Alberto Verdini2, Luca Floreano2, Zhijing Feng1,2, Alessandro Sala2, Giovanni Comelli1,2, Andreas Windischbacher6, Peter Puschnig6, Chantal Hohner7, Miroslav Kettner7, Jörg Libuda7, Mirko Cinchetti3, Claus Michael Schneider4,8, Vitaliy Feyer4,8, Erik Vesselli1,2, Giovanni Zamborlini3,4.
Abstract
Uncommon metal oxidation states in porphyrinoid cofactors are responsible for the activity of many enzymes. The F430 and P450nor co-factors, with their reduced NiI - and FeIII -containing tetrapyrrolic cores, are prototypical examples of biological systems involved in methane formation and in the reduction of nitric oxide, respectively. Herein, using a comprehensive range of experimental and theoretical methods, we raise evidence that nickel tetraphenyl porphyrins deposited in vacuo on a copper surface are reactive towards nitric oxide disproportionation at room temperature. The interpretation of the measurements is far from being straightforward due to the high reactivity of the different nitrogen oxides species (eventually present in the residual gas background) and of the possible reaction intermediates. The picture is detailed in order to disentangle the challenging complexity of the system, where even a small fraction of contamination can change the scenario.Entities:
Keywords: 2D Materials; Biomimetic Materials; Disproportionation; Nitrogen Monoxide; Porphyrins; Single-Atom Catalysts
Mesh:
Substances:
Year: 2022 PMID: 35267236 PMCID: PMC9314816 DOI: 10.1002/anie.202201916
Source DB: PubMed Journal: Angew Chem Int Ed Engl ISSN: 1433-7851 Impact factor: 16.823
Figure 1a) IR‐Vis SFG spectra of a pristine NiTPP/Cu(100) monolayer at room temperature before (top) and after exposure to NO (middle) and to NO2 (bottom). For the IR‐Vis SFG (IRAS) experiment the layer was exposed to 6×102 L (5×102 L) of NO and to 1 L (1.44 L) of NO2, respectively. Data are shown (grey markers) together with the best fit (black lines) and deconvolution (filled profiles) obtained according to the lineshape described in the Supporting Information. b) IRAS spectra corresponding to the IR‐Vis SFG spectra in (a). c) Constant‐height topographic STM image of the NiTPP/Cu(100) after saturation with NO with superimposed NiTPP models (bias +140 mV; bar corresponds to 2 nm). d–f) Inelastic electron tunneling d2I/dV2 maps at constant height of the same zone in (c) collected at 20, 140, and 170 mV bias, respectively.
Deconvolution parameters and assignment, according to the literature,[ , , ] of the IR‐Vis SFG resonances observed for the pristine monolayer of NiTPP/Cu(100) and of observed IRAS absorption lines for the same system (see Supporting Information for further data and details); in the bottom part of the table, IR‐Vis SFG and IRAS features specifically induced by the reaction with NO are reported.
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This work |
Literature |
Literature | ||||
|---|---|---|---|---|---|---|
|
IRAS |
IR‐Vis SFG |
Phenyl Modes |
Macrocycle Modes | |||
|
|
|
Δ |
|
Assignment |
|
Assignment |
|
1063 |
|
|
1050–1071 |
in‐plane, out‐of‐plane |
|
δ(Cβ‐H)sym |
|
1150 |
|
|
1152–1158 |
out‐of‐plane |
|
|
|
1172 |
|
|
1177 |
in‐plane |
1190 |
δ(Cβ‐H)asym |
|
|
1276–1279 |
288 |
1269 |
δ(CH) |
1269 |
ν(Cm‐Ph), ν(NCα) |
|
|
1304–1305 |
350 |
|
|
1302 |
ν(pyr half‐ring), ν(NCα), ν(CαCβ) |
|
1319 |
1315–1319 |
224 |
1317, 1318 |
out‐of‐plane B1u, A2u |
1313 |
ν(pyr quarter‐ring) |
|
1434 |
1434 |
246 |
1438 |
out‐of‐plane B1u |
|
|
|
|
1436–1437 |
97 |
1440 |
out‐of‐plane A2u |
|
|
|
1481 |
1482–1483 |
215 |
1470 |
δ(CCH), ν(CC) |
1470, 1473, 1485 |
ν(CαCm)sym, ν(CβCβ), ν(NCα), ν(CαCβ) |
|
1571 |
1573 |
105 |
1576, 1583, 1586 |
ν(CC), out‐of‐plane Eg, B1u, A2u |
1572 |
ν(CβCβ), ν(CαCm), δ(CαCm) |
|
1592 |
1593 |
238 |
1586 |
out‐of‐plane A2u |
1586, 1594 |
ν(CαCm)sym, ν(CαCm)asym, δ(CαCmPh) |
|
|
2856 |
280 |
|
|
|
|
|
|
2907 |
295 |
|
|
|
|
|
|
3007 |
87 |
3039, 3047, 3063, 3068, 3069, 3071, 3073, 3075 |
ν(CH), out‐of‐plane Eg, B1u, A2u |
|
|
|
3047 |
3046 |
97 |
|
|
|
|
|
3069 |
3069 |
131 |
|
|
|
|
|
|
3086 |
155 |
|
|
|
|
|
|
|
|
|
| ||
|
This work—NO Uptake |
Literature |
|
|
| ||
|
IRAS |
IR‐Vis SFG |
|
|
|
| |
|
|
|
Δ |
|
Assignment |
|
|
|
1319 |
1319 |
7 |
1304–1311 |
NO2 asymm. Stretch | ||
|
|
1365 |
250 |
1374, 1377 |
(only above ≈103 L NO) ν(pyr quarter/half‐ring) | ||
|
|
1602 |
215 |
1594, 1599 |
(only above ≈103 L NO) ν(CαCm)asym, in‐plane phenyl | ||
|
|
3097–3101 |
45 |
3095–3100 |
ν(CH) in‐plane | ||
Figure 2Combined IR‐Vis SFG (empty markers) and VB (filled markers) data of the NO uptakes on a NiTPP/Cu(100) monolayer at RT, showing the NO2/NiTPP formation rate as a function of the NO uptake background pressure (a) and pressure squared (b).
Figure 3a) Reaction pathway for NO disproportionation catalyzed by NiTPP/Cu(100) as suggested by DFT calculations: bond lengths obtained from the lowest energy configurations are indicated (see Table 2 for further details). Atoms color coding: oxygen (red), nitrogen (cyan), nickel (green), copper (orange). b) Calculated adsorption energies (eV—PBE‐D3/VASP) of NO species to NiTPP on the clean and passivated Cu surface.
Bond lengths (Å) of gas phase and adsorbed NO and (NO )‐NiTPP species calculated with PBE+D3/VASP. In the coordinated hyponitrite species, the two N−O bonds are not equivalent anymore: Here (*), the N−O distance is given for the Ni‐coordinated N, while the second N−O bond is 1.22 Å.
|
|
NO |
|
NO2 | ||||
|---|---|---|---|---|---|---|---|
|
|
N−O |
N−Ni |
N−O |
N−N |
N−Ni |
N−O |
N−Ni |
|
NOx |
1.17 |
– |
1.18 |
2.00 |
– |
1.21 |
– |
|
NOx‐NiTPP |
1.17 |
2.17 |
1.19 |
1.96 |
2.40 |
1.23 |
2.23 |
|
NOx‐NiTPP/O/Cu(100) |
1.18 |
2.21 |
1.18 |
1.98 |
2.26 |
1.24 |
2.21 |
|
NOx‐NiTPP/Cu(100) |
1.20 |
1.94 |
1.23 (*) |
1.58 |
1.99 |
1.25 |
2.00 |