Literature DB >> 35265521

Identification of Lactate-Related Gene Signature for Prediction of Progression and Immunotherapeutic Response in Skin Cutaneous Melanoma.

Yalin Xie1, Jie Zhang1, Mengna Li1, Yu Zhang1, Qian Li1, Yue Zheng1, Wei Lai1.   

Abstract

Skin cutaneous melanoma (SKCM) is a skin cancer type characterized by a high degree of immune cell infiltration. The potential function of lactate, a main metabolic product in the tumor microenvironment (TME) of SKCM, remains unclear. In this study, we systemically analyzed the predictive value of lactate-related genes (LRGs) for prognosis and response to immune checkpoint inhibitors (ICIs) in SKCM patients included from The Cancer Genome Atlas (TCGA) database. Cluster 3, by consensus clustering for 61 LRGs, manifested a worse clinical outcome, attributed to the overexpression of malignancy marks. In addition, we created a prognostic prediction model for high- and low-risk patients and verified its performance in a validation cohort, GSE65904. Between TME and the risk model, we found a negative relation of the immunocyte infiltration levels with patients' risk scores. The low-risk cases had higher ICI expression and could benefit better from ICIs relative to the high-risk cases. Thus, the lactate-related prognosis risk signature may comprehensively provide a basis for future investigations on immunotherapeutic treatment for SKCM.
Copyright © 2022 Xie, Zhang, Li, Zhang, Li, Zheng and Lai.

Entities:  

Keywords:  GEO; TCGA; immunotherapy; lactate; prognostic signature; skin cutaneous melanoma

Year:  2022        PMID: 35265521      PMCID: PMC8898832          DOI: 10.3389/fonc.2022.818868

Source DB:  PubMed          Journal:  Front Oncol        ISSN: 2234-943X            Impact factor:   6.244


  69 in total

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  2 in total

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  2 in total

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