Literature DB >> 35255481

Phase function estimation from a diffuse optical image via deep learning.

Yuxuan Liang1, Chuang Niu2, Chen Wei3, Shenghan Ren3, Wenxiang Cong2, Ge Wang2.   

Abstract

Objective.The phase function is a key element of a light propagation model for Monte Carlo (MC) simulation, which is usually fitted with an analytic function with associated parameters. In recent years, machine learning methods were reported to estimate the parameters of the phase function of a particular form such as the Henyey-Greenstein phase function but, to our knowledge, no studies have been performed to determine the form of the phase function.Approach.Here we design a convolutional neural network (CNN) to estimate the phase function from a diffuse optical image without any explicit assumption on the form of the phase function. Specifically, we use a Gaussian mixture model (GMM) as an example to represent the phase function generally and learn the model parameters accurately. The GMM is selected because it provides the analytic expression of phase function to facilitate deflection angle sampling in MC simulation, and does not significantly increase the number of free parameters.Main Results.Our proposed method is validated on MC-simulated reflectance images of typical biological tissues using the Henyey-Greenstein phase function with different anisotropy factors. The mean squared error of the phase function is 0.01 and the relative error of the anisotropy factor is 3.28%.Significance.We propose the first data-driven CNN-based inverse MC model to estimate the form of scattering phase function. The effects of field of view and spatial resolution are analyzed and the findings provide guidelines for optimizing the experimental protocol in practical applications.
© 2022 Institute of Physics and Engineering in Medicine.

Entities:  

Keywords:  Gaussian mixture model; Henyey–Greenstein phase function; Monte Carlo simulation; convolutional neural network; light propagation; phase function

Mesh:

Year:  2022        PMID: 35255481      PMCID: PMC9335120          DOI: 10.1088/1361-6560/ac5b21

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   4.174


  23 in total

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Review 2.  Optical tomographic imaging of small animals.

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3.  Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study.

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4.  Efficient estimation of subdiffusive optical parameters in real time from spatially resolved reflectance by artificial neural networks.

Authors:  Matic Ivančič; Peter Naglič; Franjo Pernuš; Boštjan Likar; Miran Bürmen
Journal:  Opt Lett       Date:  2018-06-15       Impact factor: 3.776

Review 5.  Optical properties of biological tissues: a review.

Authors:  Steven L Jacques
Journal:  Phys Med Biol       Date:  2013-05-10       Impact factor: 3.609

Review 6.  Influence of the phase function in generalized diffuse reflectance models: review of current formalisms and novel observations.

Authors:  Katherine W Calabro; Irving J Bigio
Journal:  J Biomed Opt       Date:  2014       Impact factor: 3.170

7.  Quantifying phase function influence in subdiffusively backscattered light.

Authors:  Nico Bodenschatz; Philipp Krauter; André Liemert; Alwin Kienle
Journal:  J Biomed Opt       Date:  2016-03       Impact factor: 3.170

8.  MCML--Monte Carlo modeling of light transport in multi-layered tissues.

Authors:  L Wang; S L Jacques; L Zheng
Journal:  Comput Methods Programs Biomed       Date:  1995-07       Impact factor: 5.428

9.  Machine learning estimation of tissue optical properties.

Authors:  Brett H Hokr; Joel N Bixler
Journal:  Sci Rep       Date:  2021-03-22       Impact factor: 4.996

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