Literature DB >> 35239007

Genotype-phenotype association of TARDBP mutations in Chinese patients with amyotrophic lateral sclerosis: a single-center study and systematic review of published literature.

Jinyue Li1, Qing Liu2,3, Xiaohan Sun1, Kang Zhang1, Shuangwu Liu1, Zhili Wang1, Xunzhe Yang1, Mingsheng Liu1, Liying Cui4,5, Xue Zhang6,7.   

Abstract

BACKGROUND: This study aims to determine the genetic and clinical features of TARDBP-mutated patients in our cohort of Chinese patients with amyotrophic lateral sclerosis (ALS) combined with data in the literature.
METHODS: We performed TARDBP mutation screening in 1258 Chinese ALS patients, including 1204 sporadic ALS (sALS) and 54 familial ALS (fALS) patients. A systematic literature review was conducted by searching TARDBP-mutated patients from China in the online databases.
RESULTS: In our cohort, the mutant frequency of TARDBP variants was 0.3% (4/1258), with two recurrent variants (p.G294V, p.G298V) and one novel variant (p.S332G) identified. Combining with data in the literature review, the TARDBP-mutant frequency in the Chinese population was 1.4% (83/5998), with 0.8% (46/5470) in sALS and 7.0% (37/528) in fALS. Most patients had limb onset (63.0%), with an average life expectancy of 4.3 years (range 0.5-13). Disease durations significantly differed (p = 0.002), with p.M337V showing the longest duration (80 months) and p.N378D showing the shortest duration (16.7 months).
CONCLUSION: Our study found that TARDBP mutation was not rare in Chinese fALS patients. Different TARDBP mutations were associated with specific features in phenotypes.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany.

Entities:  

Keywords:  Amyotrophic lateral sclerosis; Chinese; Genotype; Phenotype; TARDBP

Mesh:

Substances:

Year:  2022        PMID: 35239007     DOI: 10.1007/s00415-022-11042-w

Source DB:  PubMed          Journal:  J Neurol        ISSN: 0340-5354            Impact factor:   6.682


  35 in total

Review 1.  Neuropathology of Amyotrophic Lateral Sclerosis and Its Variants.

Authors:  Shahram Saberi; Jennifer E Stauffer; Derek J Schulte; John Ravits
Journal:  Neurol Clin       Date:  2015-11       Impact factor: 3.806

2.  Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm.

Authors:  Prateek Kumar; Steven Henikoff; Pauline C Ng
Journal:  Nat Protoc       Date:  2009-06-25       Impact factor: 13.491

Review 3.  Genetic epidemiology of amyotrophic lateral sclerosis: a systematic review and meta-analysis.

Authors:  Zhang-Yu Zou; Zhi-Rui Zhou; Chun-Hui Che; Chang-Yun Liu; Rao-Li He; Hua-Pin Huang
Journal:  J Neurol Neurosurg Psychiatry       Date:  2017-01-05       Impact factor: 10.154

4.  bio-samtools 2: a package for analysis and visualization of sequence and alignment data with SAMtools in Ruby.

Authors:  Graham J Etherington; Ricardo H Ramirez-Gonzalez; Dan MacLean
Journal:  Bioinformatics       Date:  2015-03-29       Impact factor: 6.937

5.  MutationTaster2: mutation prediction for the deep-sequencing age.

Authors:  Jana Marie Schwarz; David N Cooper; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2014-04       Impact factor: 28.547

6.  Genetic analysis of patients with familial and sporadic amyotrophic lateral sclerosis in a Brazilian Research Center.

Authors:  Gerson Chadi; Jessica Ruivo Maximino; Frederico Mennucci de Haidar Jorge; Fabrício Castro de Borba; Joyce Meire Gilio; Dagoberto Callegaro; Camila Galvão Lopes; Samantha Nakamura Dos Santos; Gabriela Natania Sales Rebelo
Journal:  Amyotroph Lateral Scler Frontotemporal Degener       Date:  2016-12-15       Impact factor: 4.092

7.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Authors:  Ben Langmead; Cole Trapnell; Mihai Pop; Steven L Salzberg
Journal:  Genome Biol       Date:  2009-03-04       Impact factor: 13.583

Review 8.  Protein aggregation in amyotrophic lateral sclerosis.

Authors:  Anna M Blokhuis; Ewout J N Groen; Max Koppers; Leonard H van den Berg; R Jeroen Pasterkamp
Journal:  Acta Neuropathol       Date:  2013-05-15       Impact factor: 17.088

9.  Absence of mutations in exon 6 of the TARDBP gene in 207 Chinese patients with sporadic amyotrohic lateral sclerosis.

Authors:  Cheng-hui Ye; Xi-lin Lu; Min-ying Zheng; Jun Zhen; Zhi-Ping Li; Lei Shi; Zhi-yong Liu; Lu-yang Feng; Zhong Pei; Xiao-li Yao
Journal:  PLoS One       Date:  2013-07-09       Impact factor: 3.240

10.  Screening of SOD1, FUS and TARDBP genes in patients with amyotrophic lateral sclerosis in central-southern China.

Authors:  Lihua Hou; Bin Jiao; Tingting Xiao; Lu Zhou; Zhifan Zhou; Juan Du; Xinxiang Yan; Junling Wang; Beisha Tang; Lu Shen
Journal:  Sci Rep       Date:  2016-09-08       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.