Literature DB >> 35238201

Radical S-Adenosyl Methionine Enzyme BlsE Catalyzes a Radical-Mediated 1,2-Diol Dehydration during the Biosynthesis of Blasticidin S.

Yu-Hsuan Lee1, Xueli Hou2,3, Ridao Chen4,5, Jianqiang Feng6, Xiao Liu4,7, Mark W Ruszczycky4, Jin-Ming Gao2, Binju Wang6, Jiahai Zhou3,8, Hung-Wen Liu1,4.   

Abstract

The biosynthesis of blasticidin S has drawn attention due to the participation of the radical S-adenosyl methionine (SAM) enzyme BlsE. The original assignment of BlsE as a radical-mediated, redox-neutral decarboxylase is unusual because this reaction appears to serve no biosynthetic purpose and would need to be reversed by a subsequent carboxylation step. Furthermore, with the exception of BlsE, all other radical SAM decarboxylases reported to date are oxidative in nature. Careful analysis of the BlsE reaction, however, demonstrates that BlsE is not a decarboxylase but instead a lyase that catalyzes the dehydration of cytosylglucuronic acid (CGA) to form cytosyl-4'-keto-3'-deoxy-d-glucuronic acid, which can rapidly decarboxylate nonenzymatically in vitro. Analysis of substrate isotopologs, fluorinated analogues, as well as computational models based on X-ray crystal structures of the BlsE·SAM (2.09 Å) and BlsE·SAM·CGA (2.62 Å) complexes suggests that BlsE catalysis likely proceeds via direct elimination of water from the CGA C4' α-hydroxyalkyl radical as opposed to 1,2-migration of the C3'-hydroxyl prior to dehydration. Biosynthetic and mechanistic implications of the revised assignment of BlsE are discussed.

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Year:  2022        PMID: 35238201      PMCID: PMC8934444          DOI: 10.1021/jacs.1c12010

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  41 in total

1.  Blasticidin S, a new antibiotic.

Authors:  S TAKEUCHI; K HIRAYAMA; K UEDA; H SAKAI; H YONEHARA
Journal:  J Antibiot (Tokyo)       Date:  1958-01       Impact factor: 2.649

2.  Biosynthesis of TDP-D-desosamine: identification of a strategy for C4 deoxygenation.

Authors:  Ping-hui Szu; Xuemei He; Lishan Zhao; Hung-wen Liu
Journal:  Angew Chem Int Ed Engl       Date:  2005-10-21       Impact factor: 15.336

3.  Revisiting the Mechanism of the Anaerobic Coproporphyrinogen III Oxidase HemN.

Authors:  Xinjian Ji; Tianlu Mo; Wan-Qiu Liu; Wei Ding; Zixin Deng; Qi Zhang
Journal:  Angew Chem Int Ed Engl       Date:  2019-04-01       Impact factor: 15.336

4.  Mechanistic Investigation of the Radical S-Adenosyl-L-methionine Enzyme DesII Using Fluorinated Analogues.

Authors:  Geng-Min Lin; Sei-Hyun Choi; Mark W Ruszczycky; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2015-04-02       Impact factor: 15.419

5.  Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods.

Authors:  H J Sofia; G Chen; B G Hetzler; J F Reyes-Spindola; N E Miller
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

Review 6.  Auxiliary iron-sulfur cofactors in radical SAM enzymes.

Authors:  Nicholas D Lanz; Squire J Booker
Journal:  Biochim Biophys Acta       Date:  2015-01-15

7.  Computational exploration of rearrangements related to the vitamin B12-dependent ethanolamine ammonia lyase catalyzed transformation.

Authors:  Marija Semialjac; Helmut Schwarz
Journal:  J Am Chem Soc       Date:  2002-07-31       Impact factor: 15.419

8.  The blasticidin S biosynthesis gene cluster from Streptomyces griseochromogenes: sequence analysis, organization, and initial characterization.

Authors:  Martha C Cone; Xihou Yin; Laura L Grochowski; Morgan R Parker; T Mark Zabriskie
Journal:  Chembiochem       Date:  2003-09-05       Impact factor: 3.164

9.  7-Carboxy-7-deazaguanine Synthase: A Radical S-Adenosyl-l-methionine Enzyme with Polar Tendencies.

Authors:  Nathan A Bruender; Tsehai A J Grell; Daniel P Dowling; Reid M McCarty; Catherine L Drennan; Vahe Bandarian
Journal:  J Am Chem Soc       Date:  2017-01-25       Impact factor: 15.419

10.  A [3Fe-4S] cluster and tRNA-dependent aminoacyltransferase BlsK in the biosynthesis of Blasticidin S.

Authors:  Xiankun Wang; Yuchun Zhao; Yaojie Gao; Xiangkun Luo; Aiqin Du; Zixin Deng; T Mark Zabriskie; Xinyi He; Ming Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-27       Impact factor: 11.205

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