Literature DB >> 23575682

A light-driven sodium ion pump in marine bacteria.

Keiichi Inoue1, Hikaru Ono, Rei Abe-Yoshizumi, Susumu Yoshizawa, Hiroyasu Ito, Kazuhiro Kogure, Hideki Kandori.   

Abstract

Light-driven proton-pumping rhodopsins are widely distributed in many microorganisms. They convert sunlight energy into proton gradients that serve as energy source of the cell. Here we report a new functional class of a microbial rhodopsin, a light-driven sodium ion pump. We discover that the marine flavobacterium Krokinobacter eikastus possesses two rhodopsins, the first, KR1, being a prototypical proton pump, while the second, KR2, pumps sodium ions outward. Rhodopsin KR2 can also pump lithium ions, but converts to a proton pump when presented with potassium chloride or salts of larger cations. These data indicate that KR2 is a compatible sodium ion-proton pump, and spectroscopic analysis showed it binds sodium ions in its extracellular domain. These findings suggest that light-driven sodium pumps may be as important in situ as their proton-pumping counterparts.

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Year:  2013        PMID: 23575682     DOI: 10.1038/ncomms2689

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  53 in total

1.  Channelrhodopsin engineering and exploration of new optogenetic tools.

Authors:  Peter Hegemann; Andreas Möglich
Journal:  Nat Methods       Date:  2010-12-20       Impact factor: 28.547

2.  Multimodal fast optical interrogation of neural circuitry.

Authors:  Feng Zhang; Li-Ping Wang; Martin Brauner; Jana F Liewald; Kenneth Kay; Natalie Watzke; Phillip G Wood; Ernst Bamberg; Georg Nagel; Alexander Gottschalk; Karl Deisseroth
Journal:  Nature       Date:  2007-04-05       Impact factor: 49.962

3.  High-speed atomic force microscopy shows dynamic molecular processes in photoactivated bacteriorhodopsin.

Authors:  Mikihiro Shibata; Hayato Yamashita; Takayuki Uchihashi; Hideki Kandori; Toshio Ando
Journal:  Nat Nanotechnol       Date:  2010-02-14       Impact factor: 39.213

4.  Structural changes in bacteriorhodopsin during proton translocation revealed by neutron diffraction.

Authors:  N A Dencher; D Dresselhaus; G Zaccai; G Büldt
Journal:  Proc Natl Acad Sci U S A       Date:  1989-10       Impact factor: 11.205

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Halorhodopsin is a light-driven chloride pump.

Authors:  B Schobert; J K Lanyi
Journal:  J Biol Chem       Date:  1982-09-10       Impact factor: 5.157

7.  Bacteriorhodopsin mutants containing single substitutions of serine or threonine residues are all active in proton translocation.

Authors:  T Marti; H Otto; T Mogi; S J Rösselet; M P Heyn; H G Khorana
Journal:  J Biol Chem       Date:  1991-04-15       Impact factor: 5.157

8.  Crystallographic structure of the K intermediate of bacteriorhodopsin: conservation of free energy after photoisomerization of the retinal.

Authors:  Brigitte Schobert; Jill Cupp-Vickery; Viktor Hornak; Steven Smith; Janos Lanyi
Journal:  J Mol Biol       Date:  2002-08-23       Impact factor: 5.469

9.  Aspartic acid substitutions affect proton translocation by bacteriorhodopsin.

Authors:  T Mogi; L J Stern; T Marti; B H Chao; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1988-06       Impact factor: 11.205

Review 10.  Mechanisms of sodium transport in bacteria.

Authors:  P Dimroth
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1990-01-30       Impact factor: 6.237

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  112 in total

1.  Characterization of a Cyanobacterial Chloride-pumping Rhodopsin and Its Conversion into a Proton Pump.

Authors:  Takatoshi Hasemi; Takashi Kikukawa; Naoki Kamo; Makoto Demura
Journal:  J Biol Chem       Date:  2015-11-17       Impact factor: 5.157

Review 2.  Microbial Surface Colonization and Biofilm Development in Marine Environments.

Authors:  Hongyue Dang; Charles R Lovell
Journal:  Microbiol Mol Biol Rev       Date:  2015-12-23       Impact factor: 11.056

Review 3.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

4.  Light-driven Na(+) pumps as next-generation inhibitory optogenetic tools.

Authors:  Przemyslaw Nogly; Jörg Standfuss
Journal:  Nat Struct Mol Biol       Date:  2015-05       Impact factor: 15.369

5.  A new class of marine Euryarchaeota group II from the Mediterranean deep chlorophyll maximum.

Authors:  Ana-Belen Martin-Cuadrado; Inmaculada Garcia-Heredia; Aitor Gonzaga Moltó; Rebeca López-Úbeda; Nikole Kimes; Purificación López-García; David Moreira; Francisco Rodriguez-Valera
Journal:  ISME J       Date:  2014-12-23       Impact factor: 10.302

6.  Crystal structure of a light-driven sodium pump.

Authors:  Ivan Gushchin; Vitaly Shevchenko; Vitaly Polovinkin; Kirill Kovalev; Alexey Alekseev; Ekaterina Round; Valentin Borshchevskiy; Taras Balandin; Alexander Popov; Thomas Gensch; Christoph Fahlke; Christian Bamann; Dieter Willbold; Georg Büldt; Ernst Bamberg; Valentin Gordeliy
Journal:  Nat Struct Mol Biol       Date:  2015-04-06       Impact factor: 15.369

7.  Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump.

Authors:  Hideaki E Kato; Keiichi Inoue; Rei Abe-Yoshizumi; Yoshitaka Kato; Hikaru Ono; Masae Konno; Shoko Hososhima; Toru Ishizuka; Mohammad Razuanul Hoque; Hirofumi Kunitomo; Jumpei Ito; Susumu Yoshizawa; Keitaro Yamashita; Mizuki Takemoto; Tomohiro Nishizawa; Reiya Taniguchi; Kazuhiro Kogure; Andrés D Maturana; Yuichi Iino; Hiromu Yawo; Ryuichiro Ishitani; Hideki Kandori; Osamu Nureki
Journal:  Nature       Date:  2015-04-06       Impact factor: 49.962

8.  Winter diversity and expression of proteorhodopsin genes in a polar ocean.

Authors:  Dan Nguyen; Roxane Maranger; Vanessa Balagué; Montserrat Coll-Lladó; Connie Lovejoy; Carlos Pedrós-Alió
Journal:  ISME J       Date:  2015-02-20       Impact factor: 10.302

9.  Using total internal reflection fluorescence microscopy to visualize rhodopsin-containing cells.

Authors:  J L Keffer; C R Sabanayagam; M E Lee; E F DeLong; M W Hahn; J A Maresca
Journal:  Appl Environ Microbiol       Date:  2015-03-13       Impact factor: 4.792

10.  Structural properties determining low K+ affinity of the selectivity filter in the TWIK1 K+ channel.

Authors:  Hisao Tsukamoto; Masahiro Higashi; Hideyoshi Motoki; Hiroki Watanabe; Christian Ganser; Koichi Nakajo; Yoshihiro Kubo; Takayuki Uchihashi; Yuji Furutani
Journal:  J Biol Chem       Date:  2018-03-15       Impact factor: 5.157

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