Literature DB >> 35220553

Validation of molecular diagnostics for the detection of pseudocowpox virus.

Antônio Augusto Fonseca Júnior1,2, Érica Eustáquia de Freitas Passos3, Jaqueline Silva de Oliveira4, Rafaella Starling Rocha5, Mateus Laguardia-Nascimento3, Giliane de Souza Trindade4.   

Abstract

The pseudocowpox virus (PCPV) is recognized for causing exanthematic lesions in cattle and humans. The diagnosis is important because it is a zoonosis and its clinical signs can be confused with foot-and-mouth disease, a high-impact bovine disease in livestock. The objective of this work is to validate a SYBR Green qPCR and a conventional PCR for virus detection in bovine samples. Detection limit tests, repeatability, reproducibility, sensitivity, and specificity were compared. When two analysts were compared, results demonstrated that training and pipetting influence the repeatability. The qPCR was more sensitive than conventional PCR but showed nonspecific reactions distinguishable by the melting curve. Both showed high repeatability and reproducibility.
© 2022. The Author(s) under exclusive licence to Sociedade Brasileira de Microbiologia.

Entities:  

Keywords:  Diagnostic; PCR; Parapoxvirus; Pseudocowpox virus

Mesh:

Year:  2022        PMID: 35220553      PMCID: PMC9151948          DOI: 10.1007/s42770-021-00664-3

Source DB:  PubMed          Journal:  Braz J Microbiol        ISSN: 1517-8382            Impact factor:   2.214


  12 in total

1.  The genome of pseudocowpoxvirus: comparison of a reindeer isolate and a reference strain.

Authors:  Maria Hautaniemi; Norihito Ueda; Jarno Tuimala; Andrew A Mercer; Juhani Lahdenperä; Colin J McInnes
Journal:  J Gen Virol       Date:  2010-01-27       Impact factor: 3.891

2.  Real-time PCR threshold cycle cutoffs help to identify agents causing acute childhood diarrhea in Zanzibar.

Authors:  Kristina Elfving; Maria Andersson; Mwinyi I Msellem; Christina Welinder-Olsson; Max Petzold; Anders Björkman; Birger Trollfors; Andreas Mårtensson; Magnus Lindh
Journal:  J Clin Microbiol       Date:  2014-01-08       Impact factor: 5.948

3.  Detection and diagnosis of parapoxvirus by the polymerase chain reaction.

Authors:  Y Inoshima; A Morooka; H Sentsui
Journal:  J Virol Methods       Date:  2000-02       Impact factor: 2.014

4.  Development and validation of rt-qpcr for vesicular stomatitis virus detection (Alagoas vesiculovirus).

Authors:  Anapolino Macedo de Oliveira; Antônio Augusto Fonseca; Marcelo Fernandes Camargos; Lívia Maria Orzil; Mateus Laguardia-Nascimento; Anna Gabriella Guimarães Oliveira; Jacqueline Gomes Rodrigues; Mariana Lázaro Sales; Tatiana Flávia Pinheiro de Oliveira; Cristiano Barros de Melo
Journal:  J Virol Methods       Date:  2018-03-27       Impact factor: 2.014

5.  Detection of pseudocowpox virus in water buffalo (Bubalus bubalis) with vesicular disease in the state of São Paulo, Brazil, in 2016.

Authors:  Mateus Laguardia-Nascimento; Ana Paula Ferreira de Oliveira; Fernanda Rodas Pires Fernandes; Anselmo Vasconcelos Rivetti; Marcelo Fernandes Camargos; Antônio Augusto Fonseca Júnior
Journal:  Vet Q       Date:  2016-11-08       Impact factor: 3.320

6.  Spread of poxviruses in livestock in Brazil associated with cases of double and triple infection.

Authors:  Mateus Laguardia-Nascimento; Ana Paula Ferreira de Oliveira; Isabela Ciarlini Azevedo; Anselmo Vasconcelos Rivetti Júnior; Marcelo Fernandes Camargos; Antônio Augusto Fonseca Júnior
Journal:  Arch Virol       Date:  2017-05-17       Impact factor: 2.574

7.  qPCR assay for the detection of pseudocowpox virus.

Authors:  Gabriel Augusto de Oliveira Lopes; Luciana Rabello Ferreira; Giliane de Souza Trindade; Antônio Augusto Fonseca; Jenner Karlisson Pimenta Dos Reis
Journal:  Arch Virol       Date:  2020-11-07       Impact factor: 2.574

8.  Specific qPCR assays for the detection of orf virus, pseudocowpox virus and bovine papular stomatitis virus.

Authors:  Hui Zhao; Kimberly Wilkins; Inger K Damon; Yu Li
Journal:  J Virol Methods       Date:  2013-09-12       Impact factor: 2.014

9.  Amplification of nonspecific products in quantitative polymerase chain reactions (qPCR).

Authors:  Adrián Ruiz-Villalba; Elizabeth van Pelt-Verkuil; Quinn D Gunst; Jan M Ruijter; Maurice Jb van den Hoff
Journal:  Biomol Detect Quantif       Date:  2017-11-01

10.  Primer3Plus, an enhanced web interface to Primer3.

Authors:  Andreas Untergasser; Harm Nijveen; Xiangyu Rao; Ton Bisseling; René Geurts; Jack A M Leunissen
Journal:  Nucleic Acids Res       Date:  2007-05-07       Impact factor: 16.971

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