Literature DB >> 3521491

Polysaccharide lyases.

R J Linhardt, P M Galliher, C L Cooney.   

Abstract

Polysaccharide lyases (or eliminases) are a class of enzymes (EC 4.2.2.-) that act to cleave certain activated glycosidic linkages present in acidic polysaccharides. These enzymes act through an eliminase mechanism, rather than through hydrolysis, resulting in unsaturated oligosaccharide products. Acidic polysaccharides are ubiquitous and so are the lyases that degrade them. This review article examines lyases that act on acidic polysaccharides of plant, animal, and microbial origin. These lyases are predominantly of microbial origin and come from a wide variety of both pathogenic and nonpathogenic bacteria and fungi. The lyases discussed include alginate lyase (EC 4.2.2.3), pectin lyase (EC 4.2.2.10), pectate lyase (EC 4.2.2.2), oligogalacturonide lyase (EC 4.2.2.6), exopolygalacturonate lyase (EC 4.2.2.9), chondroitin lyases (EC 4.2.2.4 and EC 4.2.2.5), hyaluronate lyase (EC 4.2.2.1), heparin lyase (EC 4.2.2.7), heparan lyase (EC 4.2.2.8), and other unclassified lyases. This review examines the sources, regulation, purification, and properties of these polysaccharide lyases.

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Year:  1986        PMID: 3521491     DOI: 10.1007/bf02798420

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   2.926


  110 in total

1.  Colorimetric determination of hyaluronidase activity.

Authors:  R L GREIF
Journal:  J Biol Chem       Date:  1952-02       Impact factor: 5.157

2.  Microbiology of wetwood: importance of pectin degradation and clostridium species in living trees.

Authors:  B Schink; J C Ward; J G Zeikus
Journal:  Appl Environ Microbiol       Date:  1981-09       Impact factor: 4.792

3.  Inducible pectate lyase synthesis and phytopathogenicity of Pseudomonas fluorescens.

Authors:  M Zucker; L Hankin
Journal:  Can J Microbiol       Date:  1971-10       Impact factor: 2.419

4.  Crystallization and some properties of chondroitinase from Arthrobacter aurescens.

Authors:  K Hiyama; S Okada
Journal:  J Biol Chem       Date:  1975-03-10       Impact factor: 5.157

5.  Substrate specificity of endo-polyguluronide lyases from Pseudomonas sp. on the basis of their kinetic properties.

Authors:  K H Min; S Sasaki; Y Kashiwabara; K Nisizawa
Journal:  J Biochem       Date:  1977-03       Impact factor: 3.387

6.  Structural studies on heparin. Tetrasaccharides obtained by heparinase degradation.

Authors:  A Linker; P Hovingh
Journal:  Carbohydr Res       Date:  1984-04-02       Impact factor: 2.104

7.  Molecular cloning of pectate lyase genes from Erwinia chrysanthemi and their expression in Escherichia coli.

Authors:  N T Keen; D Dahlbeck; B Staskawicz; W Belser
Journal:  J Bacteriol       Date:  1984-09       Impact factor: 3.490

8.  Isolation of poly-alpha-L-guluronate lyase from Klebsiella aerogenes.

Authors:  J Boyd; J R Turvey
Journal:  Carbohydr Res       Date:  1977-08       Impact factor: 2.104

9.  Degradation of even-numbered reduced and non-reduced hyaluronate oligosaccharides with D-glucuronic acid or N-acetyl-D-glucosamine as non-reducing terminal by chondroitin ABC and AC lyases.

Authors:  H P Ulrich; U Klein; K von Figura
Journal:  Hoppe Seylers Z Physiol Chem       Date:  1979-10

10.  Isolation, purification and assay of the macerating enzyme produced by Penicillium oxalicum Curie and Thom.

Authors:  T Ikotun
Journal:  Z Allg Mikrobiol       Date:  1984
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  61 in total

Review 1.  Bacteriophage resistance mechanisms.

Authors:  Simon J Labrie; Julie E Samson; Sylvain Moineau
Journal:  Nat Rev Microbiol       Date:  2010-03-29       Impact factor: 60.633

2.  Functional and structural characterization of a heparanase.

Authors:  Lisa Bohlmann; Gregory D Tredwell; Xing Yu; Chih-Wei Chang; Thomas Haselhorst; Moritz Winger; Jeffrey C Dyason; Robin J Thomson; Joe Tiralongo; Ifor R Beacham; Helen Blanchard; Mark von Itzstein
Journal:  Nat Chem Biol       Date:  2015-11-02       Impact factor: 15.040

3.  Crystallization and preliminary X-ray analysis of the rhamnogalacturonan lyase YesW from Bacillus subtilis strain 168, a member of polysaccharide lyase family 11.

Authors:  Akihito Ochiai; Masayuki Yamasaki; Takafumi Itoh; Bunzo Mikami; Wataru Hashimoto; Kousaku Murata
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-04-12

Review 4.  CS lyases: structure, activity, and applications in analysis and the treatment of diseases.

Authors:  Robert J Linhardt; Fikri Y Avci; Toshihiko Toida; Yeong Shik Kim; Miroslaw Cygler
Journal:  Adv Pharmacol       Date:  2006

Review 5.  Molecular engineering of glycosaminoglycan chemistry for biomolecule delivery.

Authors:  Tobias Miller; Melissa C Goude; Todd C McDevitt; Johnna S Temenoff
Journal:  Acta Biomater       Date:  2013-10-09       Impact factor: 8.947

6.  Capillary electrophoresis for total glycosaminoglycan analysis.

Authors:  Ebru Ucakturk; Chao Cai; Lingyun Li; Guoyun Li; Fuming Zhang; Robert J Linhardt
Journal:  Anal Bioanal Chem       Date:  2014-05-11       Impact factor: 4.142

7.  Chondroitin Lyase from a Marine Arthrobacter sp. MAT3885 for the Production of Chondroitin Sulfate Disaccharides.

Authors:  Varsha Kale; Ólafur Friðjónsson; Jón Óskar Jónsson; Hörður G Kristinsson; Sesselja Ómarsdóttir; Guðmundur Ó Hreggviðsson
Journal:  Mar Biotechnol (NY)       Date:  2015-04-28       Impact factor: 3.619

8.  Evolutionary differences in glycosaminoglycan fine structure detected by quantitative glycan reductive isotope labeling.

Authors:  Roger Lawrence; Sara K Olson; Robert E Steele; Lianchun Wang; Rahul Warrior; Richard D Cummings; Jeffrey D Esko
Journal:  J Biol Chem       Date:  2008-09-24       Impact factor: 5.157

9.  Liquid chromatography-mass spectrometry to study chondroitin lyase action pattern.

Authors:  Zhenqing Zhang; Youmie Park; Melissa M Kemp; Wenjing Zhao; A-Rang Im; David Shaya; Miroslaw Cygler; Yeong Shik Kim; Robert J Linhardt
Journal:  Anal Biochem       Date:  2008-10-17       Impact factor: 3.365

10.  Conformational flexibility of PL12 family heparinases: structure and substrate specificity of heparinase III from Bacteroides thetaiotaomicron (BT4657).

Authors:  ThirumalaiSelvi Ulaganathan; Rong Shi; Deqiang Yao; Ruo-Xu Gu; Marie-Line Garron; Maia Cherney; D Peter Tieleman; Eric Sterner; Guoyun Li; Lingyun Li; Robert J Linhardt; Miroslaw Cygler
Journal:  Glycobiology       Date:  2016-09-12       Impact factor: 4.313

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