Literature DB >> 35202586

SRSF1 governs progenitor-specific alternative splicing to maintain adult epithelial tissue homeostasis and renewal.

Tingsheng Yu1, Oscar Cazares1, Alison D Tang2, Hyun-Yi Kim3, Tomas Wald1, Adya Verma1, Qi Liu4, Mary Helen Barcellos-Hoff4, Stephen N Floor5, Han-Sung Jung3, Angela N Brooks2, Ophir D Klein6.   

Abstract

Alternative splicing generates distinct mRNA variants and is essential for development, homeostasis, and renewal. Proteins of the serine/arginine (SR)-rich splicing factor family are major splicing regulators that are broadly required for organ development as well as cell and organism viability. However, how these proteins support adult organ function remains largely unknown. Here, we used the continuously growing mouse incisor as a model to dissect the functions of the prototypical SR family protein SRSF1 during tissue homeostasis and renewal. We identified an SRSF1-governed alternative splicing network that is specifically required for dental proliferation and survival of progenitors but dispensable for the viability of differentiated cells. We also observed a similar progenitor-specific role of SRSF1 in the small intestinal epithelium, indicating a conserved function of SRSF1 across adult epithelial tissues. Thus, our findings define a regulatory mechanism by which SRSF1 specifically controls progenitor-specific alternative splicing events to support adult tissue homeostasis and renewal.
Copyright © 2022 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  alternative splicing; incisor; intestine; mouse; progenitor; splicing factor; tissue homeostasis; tissue renewal

Mesh:

Substances:

Year:  2022        PMID: 35202586      PMCID: PMC8974236          DOI: 10.1016/j.devcel.2022.01.011

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  60 in total

Review 1.  Molecular and cellular mechanisms of tooth development, homeostasis and repair.

Authors:  Tingsheng Yu; Ophir D Klein
Journal:  Development       Date:  2020-01-24       Impact factor: 6.868

Review 2.  Mammalian G1- and S-phase checkpoints in response to DNA damage.

Authors:  J Bartek; J Lukas
Journal:  Curr Opin Cell Biol       Date:  2001-12       Impact factor: 8.382

3.  A vertebrate-specific and essential role for osterix in osteogenesis revealed by gene knockout in the teleost medaka.

Authors:  Tingsheng Yu; Martin Graf; Joerg Renn; Manfred Schartl; Daria Larionova; Ann Huysseune; Paul Eckhard Witten; Christoph Winkler
Journal:  Development       Date:  2016-12-19       Impact factor: 6.868

4.  An FAK-YAP-mTOR Signaling Axis Regulates Stem Cell-Based Tissue Renewal in Mice.

Authors:  Jimmy Kuang-Hsien Hu; Wei Du; Samuel J Shelton; Michael C Oldham; C Michael DiPersio; Ophir D Klein
Journal:  Cell Stem Cell       Date:  2017-04-27       Impact factor: 24.633

5.  A postnatal switch of CELF and MBNL proteins reprograms alternative splicing in the developing heart.

Authors:  Auinash Kalsotra; Xinshu Xiao; Amanda J Ward; John C Castle; Jason M Johnson; Christopher B Burge; Thomas A Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-15       Impact factor: 11.205

6.  SRp38 regulates alternative splicing and is required for Ca(2+) handling in the embryonic heart.

Authors:  Ying Feng; Matthew T Valley; Josef Lazar; Allison L Yang; Roderick T Bronson; Stuart Firestein; William A Coetzee; James L Manley
Journal:  Dev Cell       Date:  2009-04       Impact factor: 12.270

7.  Tissue-specific and inducible Cre-mediated recombination in the gut epithelium.

Authors:  Fatima el Marjou; Klaus-Peter Janssen; Benny Hung-Junn Chang; Mei Li; Valérie Hindie; Lawrence Chan; Daniel Louvard; Pierre Chambon; Daniel Metzger; Sylvie Robine
Journal:  Genesis       Date:  2004-07       Impact factor: 2.487

8.  DRIMSeq: a Dirichlet-multinomial framework for multivariate count outcomes in genomics.

Authors:  Malgorzata Nowicka; Mark D Robinson
Journal:  F1000Res       Date:  2016-06-13

9.  Detecting differential alternative splicing events in scRNA-seq with or without Unique Molecular Identifiers.

Authors:  Yu Hu; Kai Wang; Mingyao Li
Journal:  PLoS Comput Biol       Date:  2020-06-05       Impact factor: 4.475

Review 10.  The SR protein family.

Authors:  Peter J Shepard; Klemens J Hertel
Journal:  Genome Biol       Date:  2009-10-27       Impact factor: 13.583

View more
  1 in total

1.  An antisense Alu transposon insertion/deletion polymorphism of ALDH1A1 may functionally associate with Parkinson's disease.

Authors:  Hui-Hui Fan; Jing Zheng; Xiao-Ya Huang; Ke-Yun Wu; Lei Cui; Hao-Jia Dong; Zhen Wang; Xiong Zhang; Jian-Hong Zhu
Journal:  BMC Geriatr       Date:  2022-05-16       Impact factor: 4.070

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.