| Literature DB >> 35193661 |
Cristian Răileanu1, Oliver Tauchmann1, Cornelia Silaghi2,3.
Abstract
BACKGROUND: Ixodid ticks from the Northern Hemisphere have registered a northward expansion in recent years, and Dermacentor reticulatus is such an example in Europe, its expansion being considered a result of climate change alongside other factors. The aim of this study was to identify the composition of questing tick species and the associated pathogens at different sites near the German Baltic coast.Entities:
Keywords: Co-infections; German Baltic coast; Ixodid ticks; Tick-borne pathogens
Mesh:
Year: 2022 PMID: 35193661 PMCID: PMC8862291 DOI: 10.1186/s13071-022-05173-2
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Fig. 1Sites in north-east of Germany from which questing ticks were collected. HD, Hohe Düne; UM, Ueckermünde; HN, Holländerei; TG, Torgelow; PZ, Putzar. Orange circle: sites where Ixodes ricinus and Dermacentor reticulatus were found; red circle: sites where I. ricinus and Haemaphysalis concinna were observed; green circle: site where I. ricinus, D. reticulatus and H. concinna were observed. The map is copyright free and it was built using Map Explorer version 2.0® 2010, FLI, Wusterhausen
Primers used for tick species confirmation and detection of pathogens in ticks
| Target gene | Reaction | Sequence (5′–3′) | Amplicon size (base pairs) | Annealing | Reference |
|---|---|---|---|---|---|
| Tick species identification | |||||
| PCR | cox1F: GGAACAATATATTTAATTTTTGG cox1R: ATCTATCCCTACTGTAAATATATGa | 849 | 55 °C | [ | |
| PCR | BJ1: GTCTTGTAATTGGAATGATGG BN2: TAGTTTATGGTTAGGACTACGa | 411–452 | 55 °C | [ | |
| PCR | Rsfg877: GGGGGCCTGCTCACGGCGG Rfsg1258: ATTGCAAAAAGTACAGTGAACAa | 381 | 56 °C | [ | |
| PCR | Rr190.70p: ATGGCGAATATTTCTCCAAAA Rr190.701n: GTTCCGTTAATGGCAGCATCTa | 631 | 46 °C | [ | |
| Nested PCR | PCR1: ompB-OF: GTAACCGGAAGTAATCGTTTCGTAA ompB-OR: CTTTATAACCAGCTAAACCACC Nested PCR: ompB SFG-IF: GTTTAATACGTGCTGCTAACCAAa ompB SFG/TG-IR: GGTTTGGCCCATATACCATAAGa | 489 425 | 54 °C 56 °C | [ | |
| Nested PCR | PCR1: Bospp-IGS-F: GTATGTTTAGTGAGGGGGGTG Bospp-IGS-R: GGATCATAGCTCAGGTGGTTAG Nested PCR: Bospp-IGS-Fi: AGGGGGGTGAAGTCGTAACAAG Bospp-IGS-Ri: GTCTGATAAACCTGAGGTCGGAa | 1007 388–685 | 56 °C 58 °C | [ | |
| Major surface protein 2 ( | qPCR | ApMSP2f: TGGAAGGTAGTGTTGGTTATGGTATT ApMSP2r: TTGGTCTTGAAGCGCTCGTA ApMSP2p: TGGTGCCAGGGTTGAGCTTGAGATTG | 77 | 60 °C | [ |
| Tick-borne encephalitis virus | |||||
| 3′non-coding region | RT-qPCR | F_TBE_1: GGGCGGTTCTTGTTCTCC R_TBE_1: ACACATCACCTCCTTGTCAGACT TBE-probe-WT: TGAGCCACCATCACCCAGACACA | 67 | 60 °C | [ |
aPrimers used in sequencing PCR
Questing ticks collected at five locations in Western Pomerania in 2020
| Tick species | Stage | Collection Sites | Total | ||||
|---|---|---|---|---|---|---|---|
| HD | TG | HN | UM | PZ | |||
| A | 306 | 159 | 3 | 55 | 1 | 524 | |
| N | 24 | 204 | 1 | 6 | 1 | 236 | |
| A | 116 | 3 | 0 | 0 | 206 | 325 | |
| N | 0 | 0 | 0 | 0 | 1 | 1 | |
| A | 0 | 8 | 6 | 1 | 0 | 15 | |
| N | 0 | 61 | 0 | 1 | 0 | 62 | |
| L | 0 | 11 | 0 | 0 | 0 | 11 | |
A adults, N nymphs, L larvae, HD Hohe Düne, TG Torgelow, HN Holländerei, UM Ueckermünde, PZ Putzar
Fig. 2Monthly distribution of collected ticks. a Ixodes ricinus monthly collected at four different locations: UM, Ueckermünde; HN, Holländerei; HD, Hohe Düne; TG, Torgelow. b Monthly records for Haemaphysalis concinna at three different locations (UM, HN and TG). c Dermacentor reticulatus monthly distribution from HD
Fig. 3Phylogenetic tree based on a part of the COX1 gene of Haemaphysalis concinna. The tree was constructed using the maximum likelihood method and Tamura–Nei model [50] with bootstrap support of 1000 replicates. The bootstrap values lower than 50 were omitted from the tree. Argas persicus sequence (GenBank access. no.: LC209196.1) served as outgroup. Entries preceded by a red triangle represent the sequences from the current study: samples from site UM: U6-50 and U6-51; samples from site HN: TH6-4, TH6-5 and TH6-6; samples from site TG: T5-1, T5-5 and T6-82. Low bootstrap values (usually < 50) should be omitted from the tree.
Fig. 4Phylogenetic tree based on a part of the COX1 gene of Dermacentor reticulatus. The tree was constructed using the maximum likelihood method and Tamura–Nei model [50] with bootstrap support of 1000 replicates. The bootstrap values lower than 50 were omitted from the tree. Argas persicus sequence (GenBank access. no.: LC209196.1) was used as outgroup. Entries marked with a red triangle represent the sequences from the current study: ticks from site TG: T9-9 and T9-10; ticks from site PZ: P10-1 and P11-38 and sample H5-161 from site HD. Low bootstrap values (usually <50) should be omitted from the tree.
Number of positive ticks and prevalence rates by pathogen, tick species and collection site
| Location | Tick species | Stage | Total tested ( | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Positive ( | % | 95% CI | Positive ( | % | 95% CI | Positive ( | % | 95% CI | Positive ( | % | 95% CI | ||||
| HD | A | 262 | 69 | 26.3 | 21.4–32.0 | 28 | 10.7 | 7.5–15.0 | 152 | 58.0 | 52.0–63.8 | 1 | 0.4 | 0.02–2.1 | |
| Na | 24 | 2 | 8.3 | 1.5–25.8 | 2 | 8.3 | 1.5–25.8 | 6 | 25.0 | 12.0–44.9 | 0 | 0 | 0 | ||
| A | 73 | 0 | 0 | 0 | 63 | 86.3 | 76.6–92.4 | 0 | 0 | 0 | 1 | 1.4 | 0.1–7.4 | ||
| TG | A | 159 | 10 | 6.3 | 3.5–11.2 | 34 | 21.4 | 15.7–28.4 | 55 | 34.6 | 27.6–42.3 | 5 | 3.1 | 1.4–7.1 | |
| Na | 204 | 3 | 1.5 | 0.4–4.2 | 16 | 7.8 | 4.9–12.4 | 20 | 9.8 | 6.4–14.7 | 3 | 1.5 | 0.4–4.2 | ||
| A | 3 | 0 | 0 | 0 | 3 | 100 | 43.9–100 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| A | 8 | 2 | 25.0 | 4.4–59.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| Na | 61 | 6 | 9.8 | 4.6–19.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| La | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| UM | A | 55 | 8 | 14.5 | 7.6–26.2 | 5 | 9.1 | 3.9–19.6 | 28 | 50.9 | 38.1–63.6 | 1 | 1.8 | 0.1–9.6 | |
| Na | 6 | 0 | 0 | 0 | 2 | 33.3 | 5.9–70.0 | 1 | 16.7 | 0.9–56.4 | 0 | 0 | 0 | ||
| A | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| Na | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| HN | A | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| Na | 1 | 0 | 0 | 0 | 1 | 100 | 5.1–100 | 1 | 100 | 5.1–100 | 0 | 0 | 0 | ||
| A | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| PZ | A | 85 | 0 | 0 | 0 | 66 | 77.6 | 67.7–85.2 | 0 | 0 | 0 | 0 | 0 | 0 | |
| Na | 1 | 0 | 0 | 0 | 1 | 100 | 5.1–100 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| Total | A | 479 | 87 | 18.2 | 15.0–21.9 | 67 | 14.0 | 11.2–17.4 | 235 | 49.1 | 44.6–53.5 | 7 | 1.5 | 0.7–3.0 | |
| Na | 235 | 5 | 2.1 | 0.9–4.9 | 21 | 8.9 | 5.9–13.3 | 28 | 11.9 | 8.4–16.7 | 3 | 1.3 | 0.3–3.7 | ||
| A | 161 | 0 | 0 | 0 | 132 | 82.0 | 75.3–87.2 | 0 | 0 | 0 | 1 | 0.6 | 0.03–3.4 | ||
| Na | 1 | 0 | 0 | 0 | 1 | 100 | 5.1–100 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| A | 15 | 2 | 13.3 | 2.4–37.9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| Na | 62 | 6 | 9.7 | 4.5–19.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
| La | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
HD Hohe Düne, TG Torgelow, HN Holländerei, UM Ueckermünde, PZ Putzar, A adults, N nymphs, L larvae
aThe results are calculated as minimum infection rate (MIR); %, prevalence registered in ticks
Co-detection rates observed in positive ticks for at least one pathogen by location, tick species and developmental stage
| HD | TG | UM | HN | PZ | Total | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IR | DR | IR | DR | HC | IR | HC | IR | HC | DR | IR | DR | HC | ||||||||
| A | N | A | A | N | A | A | N | A | N | N | A | A | N | A | N | A | N | A | N | |
| Total positive ticks | ||||||||||||||||||||
| 13.0 | 0 | 0 | 8.0 | 4.8 | 0 | 0 | 0 | 18.2 | 0 | 0 | 0 | 0 | 0 | 12.3 | 3.2 | 0 | 0 | 0 | 0 | |
| 5.4 | 33.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.4 | 6.5 | 0 | 0 | 0 | 0 | |
| 0.5 | 0 | 0 | 0 | 4.8 | 0 | 0 | 0 | 6.1 | 0 | 0 | 0 | 0 | 0 | 1.0 | 3.2 | 0 | 0 | 0 | 0 | |
| 1.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.7 | 0 | 0 | 0 | 0 | 0 | |
| 1.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.7 | 0 | 0 | 0 | 0 | 0 | |
| 0.5 | 0 | 0 | 0 | 4.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.7 | 0 | 0 | 0 | 0 | 0 | |
| 0.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0 | 0 | 0 | 0 | 0 | |
| 3.8 | 0 | 0 | 8 | 33.3 | 0 | 0 | 0 | 0 | 0 | 100 | 0 | 0 | 0 | 4.4 | 25.8 | 0 | 0 | 0 | 0 | |
| 0.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0 | 0 | 0 | 0 | 0 | |
| 0.5 | 16.7 | 0 | 0 | 4.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 6.5 | 0 | 0 | 0 | 0 | |
| 0 | 0 | 0 | 2.7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.7 | 0 | 0 | 0 | 0 | 0 | |
| 0 | 0 | 1.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.8 | 0 | 0 | 0 | |
| 0.5 | 0 | 0 | 1.3 | 4.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.7 | 3.2 | 0 | 0 | 0 | 0 | |
| 0.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0 | 0 | 0 | 0 | 0 | |
| 0 | 0 | 0 | 1.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0 | 0 | 0 | 0 | 0 | |
| 0.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0 | 0 | 0 | 0 | 0 | |
| 0.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0 | 0 | 0 | 0 | 0 | |
| 0 | 0 | 0 | 0 | 4.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.2 | 0 | 0 | 0 | 0 | |
| Total co-infections | 29.2 | 50 | 1.6 | 21.3 | 61.9 | 0 | 0 | 0 | 24.2 | 0 | 100 | 0 | 0 | 0 | 26.6 | 54.8 | 0.8 | 0 | 0 | 0 |
HD Hohe Düne, TG Torgelow, HN Holländerei, UM Ueckermünde, PZ Putzar, IR Ixodes ricinus, DR Dermacentor reticulatus, HC Haemaphysalis concinna, A adults, N nymphs