Literature DB >> 35192358

Discovery of Dehydroamino Acid Residues in the Capsid and Matrix Structural Proteins of HIV-1.

Rachel M Miller1, Rachel A Knoener1,2, Bayleigh E Benner2, Brian L Frey1, Mark Scalf1, Michael R Shortreed1, Nathan M Sherer2, Lloyd M Smith1.   

Abstract

Human immunodeficiency virus type 1 (HIV-1) remains a deadly infectious disease despite existing antiretroviral therapies. A comprehensive understanding of the specific mechanisms of viral infectivity remains elusive and currently limits the development of new and effective therapies. Through in-depth proteomic analysis of HIV-1 virions, we discovered the novel post-translational modification of highly conserved residues within the viral matrix and capsid proteins to the dehydroamino acids, dehydroalanine and dehydrobutyrine. We further confirmed their presence by labeling the reactive alkene, characteristic of dehydroamino acids, with glutathione via Michael addition. Dehydroamino acids are rare, understudied, and have been observed mainly in select bacterial and fungal species. Until now, they have not been observed in HIV proteins. We hypothesize that these residues are important in viral particle maturation and could provide valuable insight into HIV infectivity mechanisms.

Entities:  

Keywords:  HIV-1; bottom-up proteomics; dehydroalanine; dehydrobutyrine; virion

Mesh:

Substances:

Year:  2022        PMID: 35192358      PMCID: PMC8976760          DOI: 10.1021/acs.jproteome.1c00867

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  41 in total

Review 1.  HIV-1 matrix protein: a mysterious regulator of the viral life cycle.

Authors:  Alissa Bukrinskaya
Journal:  Virus Res       Date:  2007-01-08       Impact factor: 3.303

Review 2.  HIV-1 capsid: the multifaceted key player in HIV-1 infection.

Authors:  Edward M Campbell; Thomas J Hope
Journal:  Nat Rev Microbiol       Date:  2015-08       Impact factor: 60.633

3.  Reverse transcription-associated dephosphorylation of hepadnavirus nucleocapsids.

Authors:  David H Perlman; Eric A Berg; Peter B O'connor; Catherine E Costello; Jianming Hu
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-10       Impact factor: 11.205

4.  Single amino acid changes in the human immunodeficiency virus type 1 matrix protein block virus particle production.

Authors:  E O Freed; J M Orenstein; A J Buckler-White; M A Martin
Journal:  J Virol       Date:  1994-08       Impact factor: 5.103

Review 5.  Proteomics in the investigation of HIV-1 interactions with host proteins.

Authors:  Ming Li
Journal:  Proteomics Clin Appl       Date:  2015-01-19       Impact factor: 3.494

6.  The cysteine residues of HIV-1 capsid regulate oligomerization and cyclophilin A-induced changes.

Authors:  Marjorie Bon Homme; Carol Carter; Suzanne Scarlata
Journal:  Biophys J       Date:  2004-12-30       Impact factor: 4.033

7.  HIV-1 matrix mutations that alter gag membrane binding modulate mature core formation and post-entry events.

Authors:  Yuta Hikichi; Eri Takeda; Masayuki Fujino; Emi Nakayama; Tetsuro Matano; Tsutomu Murakami
Journal:  Virology       Date:  2019-04-27       Impact factor: 3.616

8.  The human DNA-activated protein kinase phosphorylates simian virus 40 T antigen at amino- and carboxy-terminal sites.

Authors:  Y R Chen; S P Lees-Miller; P Tegtmeyer; C W Anderson
Journal:  J Virol       Date:  1991-10       Impact factor: 5.103

9.  A Chemical Probe for Dehydrobutyrine.

Authors:  Kaitlin A Chambers; Nile S Abularrage; Caitlin J Hill; Imran H Khan; Rebecca A Scheck
Journal:  Angew Chem Int Ed Engl       Date:  2020-04-06       Impact factor: 15.336

10.  Atomic-level modelling of the HIV capsid.

Authors:  Owen Pornillos; Barbie K Ganser-Pornillos; Mark Yeager
Journal:  Nature       Date:  2011-01-20       Impact factor: 49.962

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