Literature DB >> 25523935

Proteomics in the investigation of HIV-1 interactions with host proteins.

Ming Li1.   

Abstract

Productive HIV-1 infection depends on host machinery, including a broad array of cellular proteins. Proteomics has played a significant role in the discovery of HIV-1 host proteins. In this review, after a brief survey of the HIV-1 host proteins that were discovered by proteomic analyses, I focus on analyzing the interactions between the virion and host proteins, as well as the technologies and strategies used in those proteomic studies. With the help of proteomics, the identification and characterization of HIV-1 host proteins can be translated into novel antiretroviral therapeutics.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Cellular factor; HIV-1; Host protein; MS; Viral protein

Mesh：

Substances：

Year:  2015        PMID： 25523935      PMCID： PMC4424045          DOI： 10.1002/prca.201400101

Source DB:  PubMed          Journal:  Proteomics Clin Appl        ISSN： 1862-8346            Impact factor:   3.494


  139 in total

Review 1.  Structure--function relationships in HIV-1 Nef.

Authors:  M Geyer; O T Fackler; B M Peterlin
Journal:  EMBO Rep       Date:  2001-07       Impact factor: 8.807

2.  The conserved set of host proteins incorporated into HIV-1 virions suggests a common egress pathway in multiple cell types.

Authors:  Michael E Linde; David R Colquhoun; Ceereena Ubaida Mohien; Thomas Kole; Veronica Aquino; Robert Cotter; Nathan Edwards; James E K Hildreth; David R Graham
Journal:  J Proteome Res       Date:  2013-03-29       Impact factor: 4.466

3.  A proteomic glimpse into the initial global epigenetic changes during HIV infection.

Authors:  Laura-Mae P Britton; Pavel Sova; Sarah Belisle; Shichong Liu; Eric Y Chan; Michael G Katze; Benjamin A Garcia
Journal:  Proteomics       Date:  2014-09-05       Impact factor: 3.984

Review 4.  The CD4 antigen: physiological ligand and HIV receptor.

Authors:  Q J Sattentau; R A Weiss
Journal:  Cell       Date:  1988-03-11       Impact factor: 41.582

5.  Utilization of host SR protein kinases and RNA-splicing machinery during viral replication.

Authors:  Takeshi Fukuhara; Takamitsu Hosoya; Saki Shimizu; Kengo Sumi; Takako Oshiro; Yoshiyuki Yoshinaka; Masaaki Suzuki; Naoki Yamamoto; Leonore A Herzenberg; Leonard A Herzenberg; Masatoshi Hagiwara
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-13       Impact factor: 11.205

6.  Proteomic studies reveal coordinated changes in T-cell expression patterns upon infection with human immunodeficiency virus type 1.

Authors:  Jeffrey H Ringrose; Rienk E Jeeninga; Ben Berkhout; Dave Speijer
Journal:  J Virol       Date:  2008-02-20       Impact factor: 5.103

7.  Acetylated Tat regulates human immunodeficiency virus type 1 splicing through its interaction with the splicing regulator p32.

Authors:  Reem Berro; Kylene Kehn; Cynthia de la Fuente; Anne Pumfery; Richard Adair; John Wade; Anamaris M Colberg-Poley; John Hiscott; Fatah Kashanchi
Journal:  J Virol       Date:  2006-04       Impact factor: 5.103

8.  Knockdown of the cellular protein LRPPRC attenuates HIV-1 infection.

Authors:  Cameron J Schweitzer; John M Matthews; Christian J Madson; Meghan R Donnellan; Ronald L Cerny; Michael Belshan
Journal:  PLoS One       Date:  2012-07-12       Impact factor: 3.240

Review 9.  Host cell factors in HIV replication: meta-analysis of genome-wide studies.

Authors:  Frederic D Bushman; Nirav Malani; Jason Fernandes; Iván D'Orso; Gerard Cagney; Tracy L Diamond; Honglin Zhou; Daria J Hazuda; Amy S Espeseth; Renate König; Sourav Bandyopadhyay; Trey Ideker; Stephen P Goff; Nevan J Krogan; Alan D Frankel; John A T Young; Sumit K Chanda
Journal:  PLoS Pathog       Date:  2009-05-29       Impact factor: 6.823

10.  HIV- 1 protease inhibits Cap- and poly(A)-dependent translation upon eIF4GI and PABP cleavage.

Authors:  Alfredo Castelló; David Franco; Pablo Moral-López; Juan J Berlanga; Enrique Alvarez; Eckard Wimmer; Luis Carrasco
Journal:  PLoS One       Date:  2009-11-24       Impact factor: 3.240
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  6 in total

1.  Exosome-associated release, uptake, and neurotoxicity of HIV-1 Tat protein.

Authors:  Pejman Rahimian; Johnny J He
Journal:  J Neurovirol       Date:  2016-05-12       Impact factor: 2.643

2.  Quantitative Temporal Viromics of an Inducible HIV-1 Model Yields Insight to Global Host Targets and Phospho-Dynamics Associated with Protein Vpr.

Authors:  John D Lapek; Mary K Lewinski; Jacob M Wozniak; John Guatelli; David J Gonzalez
Journal:  Mol Cell Proteomics       Date:  2017-06-12       Impact factor: 5.911

3.  Discovery of Dehydroamino Acid Residues in the Capsid and Matrix Structural Proteins of HIV-1.

Authors:  Rachel M Miller; Rachel A Knoener; Bayleigh E Benner; Brian L Frey; Mark Scalf; Michael R Shortreed; Nathan M Sherer; Lloyd M Smith
Journal:  J Proteome Res       Date:  2022-02-22       Impact factor: 4.466

Review 4.  Recent 5-year Findings and Technological Advances in the Proteomic Study of HIV-associated Disorders.

Authors:  Lijun Zhang; Xiaofang Jia; Jun-O Jin; Hongzhou Lu; Zhimi Tan
Journal:  Genomics Proteomics Bioinformatics       Date:  2017-04-06       Impact factor: 7.691

5.  Proteo-Transcriptomic Dynamics of Cellular Response to HIV-1 Infection.

Authors:  Monica Golumbeanu; Sébastien Desfarges; Céline Hernandez; Manfredo Quadroni; Sylvie Rato; Pejman Mohammadi; Amalio Telenti; Niko Beerenwinkel; Angela Ciuffi
Journal:  Sci Rep       Date:  2019-01-18       Impact factor: 4.379

6.  Plasma L-Carnitine and L-Lysine Concentrations in HIV-Infected Patients.

Authors:  Evgeny V Butorov
Journal:  Open Biochem J       Date:  2017-12-28
  6 in total

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