| Literature DB >> 35191192 |
Sarah Kim1, Gezim Lahu2, Majid Vakilynejad3, Theodoros G Soldatos4, David B Jackson4, Lawrence J Lesko1, Mirjam N Trame1.
Abstract
Immunotherapy became a key pillar of cancer therapeutics with the approvals of ipilimumab, nivolumab, and pembrolizumab, which inhibit either cytotoxic T-lymphocyte antigen-4 (CTLA-4) or programmed death-1 (PD-1) that are negative regulators of T-cell activation. However, boosting T-cell activation is often accompanied by autoimmunity, leading to adverse drug reactions (ADRs), including high grade 3-4 colitis and its severe complications whose prevalence may reach 14% for combination checkpoint inhibitors. In this research, we investigated how mechanistic differences between anti-CTLA-4 (ipilimumab) and anti-PD-1 (nivolumab and pembrolizumab) affect colitis, a general class toxicity. The data analytical platform Molecular Health Effect was utilized to map population ADR data from the US Food and Drug Administration (FDA) Adverse Event Reporting System to chemical and biological databases for hypothesis generation regarding the underlying molecular mechanisms causing colitis. Disproportionality analysis was used to assess the statistical relevance between adverse events of interest and molecular causation. We verified that the anti-CTLA-4 drug is associated with an approximately three-fold higher proportional reporting ratio associated with colitis than those of the anti-PD-1 drugs. The signal of the molecular mechanisms, including signaling pathways of inflammatory cytokines, was statistically insignificant to test the hypothesis that the severer rate of colitis associated with ipilimumab would be due to a greater magnitude of T-cell activation as a result of earlier response of the anti-CTLA-4 drug in the immune response. This patient-centered systems-based approach provides an exploratory process to better understand drug pair adverse events at pathway and target levels through reverse translation from postmarket surveillance safety reports.Entities:
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Year: 2022 PMID: 35191192 PMCID: PMC9199880 DOI: 10.1111/cts.13254
Source DB: PubMed Journal: Clin Transl Sci ISSN: 1752-8054 Impact factor: 4.438
FIGURE 1Overview of the mechanisms of action and toxicity. (a) Mechanistic differences between CTLA‐4 and PD‐1. , (b) The immune‐mediated toxicity, colitis, and the mechanism of action of the immune checkpoint inhibitors. Created in BioRender.com
FIGURE 2Overview of analysis workflow using Molecular Health Effect. This figure was adapted from Schotland et al. ADR, adverse drug reaction; AE, adverse event; ATC, Anatomic Therapeutic Chemical; PRR, proportional reporting ratio
Safety assessment overview presenting statistical associations between drug(s) and colitis
| Drug(s) |
|
| PRR associated with colitis (95% CI) |
|---|---|---|---|
| Ipilimumab | 14,448 | 1053 | 45.99 (43.31–48.82) |
| Nivolumab | 41,783 | 1144 | 17.32 (16.33–18.37) |
| Pembrolizumab | 19,022 | 404 | 12.96 (11.76–14.29) |
| Ipilimumab + nivolumab | 9864 | 613 | 38.35 (35.48–41.46) |
Abbreviations: ADR, adverse drug reaction; CI, confidence interval; N, number of case reports; PRR, Proportional Reporting Ratio and Data collection period, Q3/2015 to Q4/2019.
FIGURE 3Graphical overview of cohort characteristics. (a) Number of cohort A case reports per year; (b) number of cohort B case reports per year; (c) comparison of the PRRs associated with colitis between anti‐CTLA‐4 (ipilimumab), anti‐PD‐1 (nivolumab and pembrolizumab) drugs, and the ipilimumab plus nivolumab regimen – the dashed line represents PRR = 2.0; and (d) distribution of the most severe outcomes in cohort B (namely, “Death,” “Life‐Threatening,” and “Disability”) – a case may have more than one outcome reported. Data collection period = Q3/2015 to Q4/2019. PRR, proportional reporting ratio
Classification of inflammatory signaling
| Signaling type | |
|---|---|
| Pro‐inflammatory signaling | IFN |
| IFN | |
| IL1 | |
| IL6 | |
| IL8 | |
| TNF | |
| Anti‐inflammatory signaling | IFN |
| IL12 | |
| Pro and anti‐inflammatory signaling | IL2 (pro, |
| IL23 (pro, | |
| IL27 (pro and anti | |
| PI3K (pro, | |
| mTOR (pro and anti | |
Abbreviations: IFN, interferon; IL, interleukin; mTOR, mammalian target of rapamycin; PI3K, phosphoinositide 3‐kinase; TNF, tumor necrosis factor.
Protein and pathway mapping on pro‐ and anti‐inflammatory signaling pathways
| Drug | Total | PRR | 95% CI PRR |
|---|---|---|---|
| Pro‐inflammatory signaling | |||
| IL1‐mediated signaling events | |||
| Cohort A | |||
| Ipilimumab | 751 | 0.7 | 0.65–0.75 |
| Nivolumab | 1963 | 0.63 | 0.6–0.66 |
| Pembrolizumab | 828 | 0.59 | 0.55–0.63 |
| Ipilimumab + nivolumab | 606 | 0.83 | 0.77–0.89 |
| Cohort B | |||
| Ipilimumab | 64 | 0.82 | 0.65–1.04 |
| Nivolumab | 76 | 0.89 | 0.72–1.11 |
| Pembrolizumab | 27 | 0.9 | 0.62–1.3 |
| Ipilimumab + nivolumab | 51 | 1.12 | 0.86–1.46 |
| IL6‐mediated signaling events | |||
| Cohort A | |||
| Ipilimumab | 942 | 0.55 | 0.51–0.58 |
| Nivolumab | 2785 | 0.56 | 0.54–0.58 |
| Pembrolizumab | 1417 | 0.62 | 0.59–0.66 |
| Ipilimumab + nivolumab | 760 | 0.65 | 0.6–0.69 |
| Cohort B | |||
| Ipilimumab | 70 | 0.56 | 0.44–0.7 |
| Nivolumab | 98 | 0.72 | 0.59–0.87 |
| Pembrolizumab | 46 | 0.95 | 0.73–1.25 |
| Ipilimumab + nivolumab | 57 | 0.78 | 0.61–1.0 |
| TNF receptor signaling pathway | |||
| Cohort A | |||
| Ipilimumab | 1212 | 0.45 | 0.43–0.48 |
| Nivolumab | 3175 | 0.41 | 0.4–0.43 |
| Pembrolizumab | 1333 | 0.38 | 0.36–0.4 |
| Ipilimumab + nivolumab | 982 | 0.54 | 0.51–0.57 |
| Cohort B | |||
| Ipilimumab | 110 | 0.57 | 0.47–0.68 |
| Nivolumab | 139 | 0.66 | 0.56–0.77 |
| Pembrolizumab | 43 | 0.58 | 0.43–0.77 |
| Ipilimumab + nivolumab | 85 | 0.75 | 0.62–0.92 |
| Anti‐inflammatory signaling | |||
| IL12‐mediated signaling events | |||
| Cohort A | |||
| Ipilimumab | 623 | 0.6 | 0.56–0.65 |
| Nivolumab | 1964 | 0.65 | 0.63–0.68 |
| Pembrolizumab | 1055 | 0.77 | 0.73–0.82 |
| Ipilimumab + nivolumab | 538 | 0.76 | 0.7–0.82 |
| Cohort B | |||
| Ipilimumab | 38 | 0.5 | 0.37–0.69 |
| Nivolumab | 53 | 0.65 | 0.5–0.84 |
| Pembrolizumab | 20 | 0.69 | 0.45–1.06 |
| Ipilimumab + nivolumab | 35 | 0.8 | 0.58–1.1 |
| The information processing pathway at the IFN beta enhancer | |||
| Cohort A | |||
| Ipilimumab | 2221 | 1.25 | 1.2–1.3 |
| Nivolumab | 5255 | 1.02 | 0.99–1.05 |
| Pembrolizumab | 1898 | 0.81 | 0.78–0.84 |
| Ipilimumab + nivolumab | 1867 | 1.54 | 1.47–1.6 |
| Cohort B | |||
| Ipilimumab | 178 | 1.37 | 1.2–1.57 |
| Nivolumab | 209 | 1.48 | 1.31–1.68 |
| Pembrolizumab | 56 | 1.12 | 0.88–1.43 |
| Ipilimumab + nivolumab | 140 | 1.85 | 1.6–2.14 |
Data collection period, Q3/2015 to Q4/2019.
Abbreviations: ADR, adverse drug reaction; and IFN, interferon; CI, confidence interval; CXCR1, IL8 receptor alpha; CXCR2, IL8 receptor beta; IL, interleukin; N, number of case reports; PRR, Proportional Reporting Ratio; TNF, tumor necrosis factor.
Protein and pathway mapping on early stage of immune response
| Drug | Total | PRR | 95% CI PRR |
|---|---|---|---|
| TCR signaling in naïve CD8+T cells | |||
| Cohort A | |||
| Ipilimumab | 689 | 0.57 | 0.53–0.62 |
| Nivolumab | 1866 | 0.54 | 0.51–0.56 |
| Pembrolizumab | 912 | 0.58 | 0.54–0.62 |
| Ipilimumab + nivolumab | 548 | 0.67 | 0.62–0.73 |
| Cohort B | |||
| Ipilimumab | 52 | 0.6 | 0.46–0.78 |
| Nivolumab | 71 | 0.75 | 0.6–0.94 |
| Pembrolizumab | 23 | 0.69 | 0.46–1.02 |
| Ipilimumab + nivolumab | 39 | 0.77 | 0.57–1.04 |
| TCR signaling in naïve CD4+T cells | |||
| Cohort A | |||
| Ipilimumab | 726 | 0.58 | 0.54–0.62 |
| Nivolumab | 2073 | 0.57 | 0.55–0.59 |
| Pembrolizumab | 918 | 0.55 | 0.52–0.64 |
| Ipilimumab + nivolumab | 584 | 0.68 | 0.63–0.74 |
| Cohort B | |||
| Ipilimumab | 52 | 0.57 | 0.44–0.74 |
| Nivolumab | 77 | 0.77 | 0.62–0.96 |
| Pembrolizumab | 23 | 0.65 | 0.44–0.97 |
| Ipilimumab + nivolumab | 39 | 0.73 | 0.54–0.99 |
| Immunoregulatory interactions between a lymphoid and a non‐lymphoid cell | |||
| Cohort A | |||
| Ipilimumab | 664 | 0.37 | 0.35–0.4 |
| Nivolumab | 2142 | 0.41 | 0.4–0.43 |
| Pembrolizumab | 872 | 0.37 | 0.35–0.4 |
| Ipilimumab + nivolumab | 500 | 0.41 | 0.38–0.45 |
| Cohort B | |||
| Ipilimumab | 39 | 0.3 | 0.22–0.41 |
| Nivolumab | 56 | 0.4 | 0.31–0.51 |
| Pembrolizumab | 27 | 0.54 | 0.38–0.78 |
| Ipilimumab + nivolumab | 21 | 0.28 | 0.18–0.42 |
Abbreviations: ADR, adverse drug reaction; CI, confidence interval; N, number of case reports; PRR, Proportional Reporting Ratio and Data collection period, Q3/2015 to Q4/2019.