Liping He1,2, Steeve Boulant3, Megan Stanifer3, Cuncai Guo3, Anna Nießen1, Mingyi Chen1,4, Klaus Felix1, Frank Bergmann5, Oliver Strobel1, Simon Schimmack1. 1. Department of General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Heidelberg, Germany. 2. Department of Medical Oncology, The First Affiliated Hospital of Zhejiang University School of Medicine, Hangzhou, China. 3. Center for Integrative Infectious Disease Research, Heidelberg University, Heidelberg, Germany. 4. Department of Breast Surgery, The First Affiliated Hospital of Zhejiang University School of Medicine, Hangzhou, China. 5. Institute of Pathology, Heidelberg University, Heidelberg, Germany.
Abstract
MEN1, which encodes menin protein, is the most frequently mutated gene in pancreatic neuroendocrine neoplasms (pNEN). Pleiotrophin (PTN) has been reported as a downstream factor of menin that promotes metastasis in different tumor entities. In this study, the effect of menin and its link to PTN were assessed using features of pNEN cells and the outcome of patients with pNEN. The expression levels of menin and PTN in tissues from patients with pNEN were examined using qRT-PCR and western blot and compared with their metastasis status. Functional assays, including transwell migration/invasion and scratch wound-healing assays, were performed on specifically designed CRISPR/Cas9-mediated MEN1-knockout (MEN1-KO) pNEN cell lines (BON1MEN1-KO and QGP1MEN1-KO ) to study the metastasis of pNEN. Among 30 patients with menin-negative pNEN, 21 revealed a strong protein expression of PTN. This combination was associated with metastasis and shorter disease-free survival. Accordingly, in BON1MEN1-KO and QGP1MEN1-KO cells, PTN protein expression was positively associated with enhanced cell migration and invasion, which could be reversed using PTN silencing. PTN is a predicting factor of metastatic behavior of menin-deficient-pNEN. In vitro, menin is able to both promote and suppress the metastasis of pNEN by regulating PTN expression depending on the tumoral origin of pNEN cells.
MEN1, which encodes menin protein, is the most frequently mutated gene in pancreatic neuroendocrine neoplasms (pNEN). Pleiotrophin (PTN) has been reported as a downstream factor of menin that promotes metastasis in different tumor entities. In this study, the effect of menin and its link to PTN were assessed using features of pNEN cells and the outcome of patients with pNEN. The expression levels of menin and PTN in tissues from patients with pNEN were examined using qRT-PCR and western blot and compared with their metastasis status. Functional assays, including transwell migration/invasion and scratch wound-healing assays, were performed on specifically designed CRISPR/Cas9-mediated MEN1-knockout (MEN1-KO) pNEN cell lines (BON1MEN1-KO and QGP1MEN1-KO ) to study the metastasis of pNEN. Among 30 patients with menin-negative pNEN, 21 revealed a strong protein expression of PTN. This combination was associated with metastasis and shorter disease-free survival. Accordingly, in BON1MEN1-KO and QGP1MEN1-KO cells, PTN protein expression was positively associated with enhanced cell migration and invasion, which could be reversed using PTN silencing. PTN is a predicting factor of metastatic behavior of menin-deficient-pNEN. In vitro, menin is able to both promote and suppress the metastasis of pNEN by regulating PTN expression depending on the tumoral origin of pNEN cells.
Biomaterial Bank HeidelbergNon‐specific single guide ribonucleic acid generated CRISPR/Cas9 BON1 cell lineMEN1‐knockout CRISPR/Cas9 BON1 cell lineMEN1‐knockout CRISPR/Cas9 BON1 cell line treated with pleiotrophin‐small interfering ribonucleic acidBON1 treated with negative control‐small interfering ribonucleic acidBON1 treated with pleiotrophin‐small interfering ribonucleic acidClustered regularly interspaced short palindromic repeats‐associated nuclease 9Clustered regularly interspaced short palindromic repeatsC‐reactive proteindisease‐free survivalgradingJapanese Cancer Research Resources Banklymphatic vessel invasiondistant metastasismicrotubule‐associated protein 2mouse double minute 2multiple endocrine neoplasia 1MEN1‐knockout CRISPR/Cas9 pNEN cell linespancreatic neuroendocrine neoplasms with lymph node metastasis or/and liver metastasis positiveO6‐methylguanine deoxyribonucleic acid methyltransferaselymph node metastasispancreatic neuroendocrine neoplasms without lymph node metastasis or/and liver metastasis positiveoverall survivalliver metastasislymph node metastasispancreatic neuroendocrine neoplasmspancreatic neuroendocrine neoplasms with negative protein expression of meninpancreatic neuroendocrine neoplasms with negative protein expression of menin and pleiotrophinpancreatic neuroendocrine neoplasms with negative protein expression of menin but positive pleiotrophin expressionpancreatic neuroendocrine tumorspleiotrophinNon‐specific single guide ribonucleic acid generated CRISPR/Cas9 QGP1 cell lineMEN1‐knockout CRISPR/Cas9 QGP1 cell lineQGP1 treated with negative control‐small interfering ribonucleic acidQGP1 treated with pleiotrophin‐small interfering ribonucleic acidquantitative real‐time PCRresection marginreceptor‐like protein tyrosine phosphatasesingle guide RNAinvasion to veinWorld Health Organization
INTRODUCTION
Pancreatic neuroendocrine neoplasms (pNEN) are a heterogeneous group of malignancies arising from different cell types within the pancreas.
According to the most recent WHO classification,
pNEN are categorized into well differentiated pancreatic neuroendocrine tumors (pNET Grade G1, G2 and G3) as well as poorly differentiated pancreatic neuroendocrine carcinoma (pNEC G3). The grading depends on the proliferation rate, which is measured in Ki67‐positive cells within 10 high‐powered fields (G1: <3%, G2: 3%–20%, G3: >20%) and is the strongest prognostic factor.
Further effective prognostic tools are the TNM classification,
presenting a strong correlation of size and metastasis with unfavorable prognosis, metastasis in lymph nodes
/distant metastasis,
as well as markers such as preoperative dysglycemia (blood glucose ≥140 mg% and/or HbA1c ≥6.5%)
or peroperative CRP (>5 mg/L).
Furthermore, pNENs in combination with lymph node
or distant metastasis
,
are associated with worse prognosis.Pancreatic neuroendocrine neoplasms can be inherited (as in MEN1 syndrome) or developed due to germline mutations within the MEN1 gene that is located on 11q13.
MEN1 translates into the protein menin, which is known to be a tumor suppressor in the development of different endocrine tumors.
,
However, the vast majority (60%–90%) of pNEN arise sporadically.
,
,
,
Frequently occurring genetic alterations in pNEN are LOH of MEN1(50%)
and/or MEN1 mutations (40%).
MEN1 mutations often include nonsense and missense mutations as well as in‐frame deletions distributed across the gene locus.
,
Those alterations often result in menin protein degradation and inactivation revealing that menin may play an important role in tumorigenesis and tumor progression of all pNEN. However, the mechanism of how menin inactivation initiates tumorigenesis of pNEN is not well understood.The heparin‐binding growth factor pleiotrophin (PTN) is a secreted 19‐kDa regulatory peptide with angiogenic properties that is considered as a proto‐oncogene and is overexpressed in various malignancies such as breast, prostate, colon, and skin cancer.
,
,
,
Menin has been shown to repress PTN expression in non–small‐cell lung cancer
and malignant melanoma.
As there is currently no literature on the role of PTN in pNEN, this study aimed to evaluate the link between menin and PTN in pNEN. For this purpose, CRISPR/Cas9 MEN1‐knockout BON1 and QGP1 cells were developed and subsequent functional alternations were analyzed. The association between menin and PTN was further examined in pNEN tissue.
MATERIALS AND METHODS
Clinical samples
For this study, frozen pNEN tumor tissues (n = 67) were used for western blot and qRT‐PCR analysis. All pNEN tumor tissues were provided from the Pancobank of the European Pancreas Center (EPZ/Department of Surgery, University Hospital Heidelberg; Ethical Approval Vote No. S‐708/2019), which is part of the BMBH. An experienced pancreas pathologist (FB) performed the histological examination for paraffin‐embedded and H&E‐stained pancreatic tissue. Only tumor samples containing more than 90% tumor tissue were used in this study.
Origin and culture of BON1 and QGP1 cells
The human pNEN cell line BON1, which was derived from a lymph node metastasized site of pNEN,
was given as a gift from Dr. M. Kidd, Yale University School of Medicine and had already been authenticated using short tandem repeat (STR) analysis. The human pNEN cell line QGP1 (pNEN primary) was purchased from the JCRB (Japan). The adherent monolayer BON1 and QGP1 cells were cultured as described previously.
Whole exome sequencing of both cell lines has shown significant genetic differences.
,
Generation of MEN1‐knockout pNEN cell lines with CRISPR/Cas9 editing system
Single guide RNA (sgRNA) sequences for CRISPR/Cas9 were designed by CRISPOR (http://crispor.tefor.net/). Three insert oligonucleotides were positioned at the second exon of MEN1: Human MEN1 sgRNA 1: 5′‐CACCGGCTGCGCTCCATCGACGACG‐3′,Human MEN1 sgRNA 2: 5′‐CCAGGCGCACCACGTCGTCGACAAA‐3′ andHuman MEN1 sgRNA 3: 5′‐CGTCGACGGCGCCTCGGATCTCAAA‐3′.The fourth insert oligonucleotide was positioned at the fourth exon of MEN1: Human MEN1 sgRNA 4: 5′‐CACCGCATGCGCTGTGACCGCAAGA‐3′. A negative control sgRNA 5′‐CACCGGTATTACTGATATTGGTGGG‐3′, was selected without the overlapping sequence of the MEN1 gene. Complementary oligonucleotides were ligated into the lentiCRISPRv2 plasmid no. 52961 (Addgene) as described previously by Ran et al.
BON1 and QGP1 were infected with MEN1 lentiCRISPRv2 lentivirus or the negative control lentivirus according to a standard protocol.
Transfected cells were cultured including 10 μg/ml puromycin (InvioGen).
Sanger sequencing
Sanger sequencing was used to confirm the synthesized sgRNA‐lentiCRISPRv2 vector with the U6 primer before infection of pNEN cells and the MEN1‐knockout in CRISPR/Cas9 cell lines using the primer (AAATTGGACAGCTCCGGTGT) (Invitrogen) as previously described.
Quantitative real‐time PCR (qRT‐PCR)
The mRNA of frozen tissues was extracted and reverse transcribed using the RNeasy mini kit (Qiagen) and the 1st Strand cDNA Synthesis Kit (AMV) (Roche) according to the manufacturer's instructions. The primers used are shown as follows (Qiagen): Human MEN1 forward primer 5′‐ATCACAGGCACCAAATTGGACAGC‐3′; Human MEN1 reverse primer 5′‐AACACTACCCAGGCATGATCCTCA‐3′; Human PTN forward primer 5′‐TGAAGACCCAGAGATGTAAGAT‐3′; Human PTN reverse primer 5′‐TCTTCTGGCATTCGGCATTG‐3′; Human GAPDH forward primer 5′‐GTCTCCTCTGACTTCAACAGCG‐3′; and Human GAPDH reverse primer 5′‐ACCACCCTGTTGCTGTAGCCAA‐3′.qRT‐PCR analysis was performed as previously described.
GAPDH was used as an internal reference for normalization and the relative mRNA expression of each gene was analyzed using the ΔΔCT method as recommended.
Protein extraction and western blot analysis
Protein was extracted by RIPA buffer supplemented with complete protease inhibitors (Roche) from frozen pNEN tissue specimen (60–80 mg) or from pNEN cell pellets. Protein expression was assessed as previously described
using the primary antibodies Monoclonal Rabbit anti‐Human‐Menin (Abcam, ab92443, dilution 1:200), Monoclonal Mouse anti‐Human‐Pleiotrophin (Antibodies‐online, ABIN 562528, dilution 1:50, Nordrhein‐Westfalen, Germany) and Monoclonal Rabbit anti‐Human‐Beta‐actin (Abcam, dilution 1:200). The secondary antibodies were HRP Goat Anti‐Rabbit (IgG) and HRP Goat Anti‐Mouse (IgG) (Abcam). Protein expression was quantified using ImageJ (NIH, US). Negative protein expression of patient tissue was defined as a protein expression level <5% measured by grayscale analysis in ImageJ.
Small interfering RNA (siRNA) transfection
To investigate the impact of PTN on pNEN, the PTN translation was specifically suppressed by introduction of siRNA. The sequences of siRNA to reduce PTN expression were as follows: PTN siRNA1: 5′‐GGACUGGAGCUGAGUGCAtt‐3′ (Ambion) and PTN siRNA2: 5′‐GGAGCUGAGUGCAAGCAAAtt‐3′ (Ambion). Negative control siRNA was purchased from AmbionCells were plated on 6‐well plates (Falcon, Colorado, USA) at a density of 500 000 cells per well, supplementing with 0.24 nM per well of siRNAs using HiPerFect Transfection Reagent (Qiagen) according to the manufacturer's suggestions. To confirm the downregulation of each protein, the transfected cells were collected for the western blot analysis 48 h after the transfection.
Scratch wound‐healing and migration/invasion assay
Scratch wound‐healing assay was used to assess the cell migration ability. A 10‐μl pipette tip (Eppendorf) was used to perform a vertical scratch in each well of 6‐well plates (Falcon, Colorado, USA) which was filled with more than 90% confluency monolayer cells. After removing non‐adherent cells, the cell‐free area was measured. At ×100 magnification, photographic documentation of cell‐free areas was taken every 24 h. The wound‐healing rate was calculated using the formula: wound‐healing rate (%) = [(width at 0 h − width at 120 h)/(width at 0 h)] × 100.The migration and invasion potential were assessed by transwell migration/invasion assay as described previously.
All experiments were repeated three times.
Statistical analysis
Statistical analyses were performed using GraphPad Prism 5 (GraphPad Software). Relative expression and number of cells were recorded as mean ±SD. n describes the number of replicates. The OS time of patients with pNEN was defined as the time from resection to either death or last follow‐up. Survival curves were plotted using the Kaplan–Meier method. The difference between the Kaplan–Meier curves was tested for significance applying the log‐rank test. For experiments involving MTT assay, transwell migration assay, transwell invasion assay, and scratch wound‐healing assay, data from a minimum of three independent experiments were used for statistical analysis. Results from three independent experiments were averaged prior to statistical analysis. A two‐tailed, unpaired Student t‐test or two‐way ANOVA were used to analyze data and determine significant differences. All the analyses were considered statistically significant at a p < 0.05 level and p‐values are indicated with asterisks (*p ≤ 0.05; **p ≤ 0.01; ***p ≤ 0.001).
RESULTS
Downregulation of relative MEN1 mRNA expression in metastasized patients with pNEN
Relative mRNA expression levels of MEN1 and PTN were assessed using qRT‐PCR in 40 random G1 and G2 pNEN tissues. All samples were divided into two groups regarding their N (lymph node metastasis) and M (distant metastasis) stages. In total, 22 samples were either N and/or M positive (N+ and/or M+) (MET group) whereas 18 samples showed no metastasis (Non‐MET group) during their entire follow‐up of 71.86 ± 45.85 months (mean ±SD). As shown in Figure 1A, relative mRNA expression of MEN1 was significantly downregulated in the MET group compared with the Non‐MET group (p < 0.05).
FIGURE 1
Expression and consequence of menin and PTN expression in patients with pNEN. (A) Relative mRNA expression of MEN1 is significantly lower in the Non‐MET group (n = 22) than in the MET group (n = 18) (p < 0.05). (B–D) Representative western blots (ImageJ software analysis below) of menin and PTN protein expression in pNENm− tissues. Two samples from the pNENm+p+ group, eight samples from the pNENm−p+ group and seven samples from the pNENm−p− group are displayed. (E) Kaplan–Meier analysis of disease‐free survival rate shows a significantly longer DFS in pNENm−p− patients (n = 9, 5‐year DFS = 88.89%, median DFS = 48.3 months) compared with pNENm−p+ patients (n = 21, 5‐year DFS = 57.14%, median DFS = 46.2 months) (Log‐rank, p < 0.05). (F) Kaplan–Meier analysis of OS rate shows no significant difference between pNENm−p+ patients (n = 21, 5‐year OS = 61.9%) and pNENm−p− patients (n = 9, 5‐year OS = 66.7%) (Log‐rank, p > 0.05). MET: patients with pNEN with either lymph node metastasis or/and distant metastases. Non‐MET: patients with pNEN with no metastasis. pNENm+p+: patients with positive menin and PTN protein expression. pNENm−p+: patients with no menin but positive PTN protein expression. pNENm−p−: patients with neither menin nor PTN protein expression
Expression and consequence of menin and PTN expression in patients with pNEN. (A) Relative mRNA expression of MEN1 is significantly lower in the Non‐MET group (n = 22) than in the MET group (n = 18) (p < 0.05). (B–D) Representative western blots (ImageJ software analysis below) of menin and PTN protein expression in pNENm− tissues. Two samples from the pNENm+p+ group, eight samples from the pNENm−p+ group and seven samples from the pNENm−p− group are displayed. (E) Kaplan–Meier analysis of disease‐free survival rate shows a significantly longer DFS in pNENm−p− patients (n = 9, 5‐year DFS = 88.89%, median DFS = 48.3 months) compared with pNENm−p+ patients (n = 21, 5‐year DFS = 57.14%, median DFS = 46.2 months) (Log‐rank, p < 0.05). (F) Kaplan–Meier analysis of OS rate shows no significant difference between pNENm−p+ patients (n = 21, 5‐year OS = 61.9%) and pNENm−p− patients (n = 9, 5‐year OS = 66.7%) (Log‐rank, p > 0.05). MET: patients with pNEN with either lymph node metastasis or/and distant metastases. Non‐MET: patients with pNEN with no metastasis. pNENm+p+: patients with positive menin and PTN protein expression. pNENm−p+: patients with no menin but positive PTN protein expression. pNENm−p−: patients with neither menin nor PTN protein expression
PTN protein expression in menin‐negative pNEN
As MEN1 mRNA was downregulated in metastasized pNEN, tumors with negative protein expression of menin (pNENm−, no detectable protein expression on grayscale analysis using ImageJ software <5%) were analyzed further (n = 30). In all 30 pNENm−, PTN expression was examined. As shown in Table 1 and Figure 1B–D, 21 of 30 pNENm− were PTN positive (pNENm−p+ group), whereas 9 of 30 pNENm− had no detectable PTN protein expression (pNENm−p− group). Whereas invasion to vein (V), resection margin (R) as well as grading (G) did not differ between the groups, pNENm−p+ patients showed a significantly higher rate of lymph node metastasis (pN), liver metastasis (pM), lymphatic vessel invasion (L), infiltration into adjacent tissues, and recurrences compared with pNENm−p− patients (Table 1; p < 0.05), suggesting that PTN plays an important role in the development of metastasis and aggressiveness in pNEN. Consistently, pNENm−p+ patients demonstrated a significantly worse 5‐year disease‐free survival (n = 21, 5‐year DFS = 57.1%) compared with pNENm−p− patients (n = 9, 5‐year DFS = 88.9%) (p < 0.05; Figure 1E). However, OS did not differ between pNENm−p+ patients (n = 21, 5‐year OS = 61.9%) and pNENm−p− patients (n = 9, 5‐year OS = 66.7%) (Figure 1F). Taken together, the combination of negative menin and positive PTN protein expression might be a potential predictive factor for metastatic behavior and represented by decreased disease‐free survival of patients with pNEN.
TABLE 1
The correlation between PTN and clinicopathological characteristics of pNENm− patients
pNENm−
p‐value
pNENm−p+(n = 21)
pNENm−p−(n = 9)
n
Percentage (%)
n
Percentage (%)
pN: Lymph node metastasis
Negative
6
28.57
8
88.89
0.0043**
Positive
15
71.43
1
11.11
pM (HEP): Liver metastasis
Negative
17
80.95
9
100
<0.0001***
Positive
4
19.05
0
0
V: Invasion to vein
Negative
9
42.86
7
77.78
0.1184
Positive
12
57.14
2
22.22
L: Invasion to lymphatic vessels
Negative
10
47.62
8
88.89
0.0492*
Positive
11
52.38
1
11.11
Infiltrate in adjacent tissues
Negative
5
23.81
6
66.67
0.0419*
Positive
16
76.19
3
33.33
R: Resection margins
Negative (0)
10
47.62
7
77.78
0.2293
Positive (1/2)
11
52.38
2
22.22
Recurrence
No
12
57.14
9
88.89
0.0289*
Yes
9
42.86
0
11.11
Grade
G1
4
19.05
4
44.44
0.3498
G2
13
61.90
4
44.44
G3
4
19.05
1
11.12
Gender
Male
12
57.14
5
55.56
0.9898
Female
9
42.86
4
44.44
Age: median (min‐max)
68.6 (40–96)
59.4 (26–80)
Abbreviations: Metastatic neoplasms, pN+ or/and pM+; p−, no PTN expression; p+, PTN positive expression; pNENm−, No menin patients with pNEN. Bold values are highlight significance.
*p < 0.05, **p < 0.01, ***p < 0.001.
The correlation between PTN and clinicopathological characteristics of pNENm− patientsAbbreviations: Metastatic neoplasms, pN+ or/and pM+; p−, no PTN expression; p+, PTN positive expression; pNENm−, No menin patients with pNEN. Bold values are highlight significance.*p < 0.05, **p < 0.01, ***p < 0.001.
Given the clinical relevance of menin deficiency in pNEN, menin protein expression was analyzed in two pNEN cell lines BON1 and QGP1 and compared with HEK293T
,
,
,
and HeLa cells
that are known to express high menin protein levels (please refer to Figure 2A). Having proven significant menin expression, MEN1‐knockout CRISPR/Cas9 pNEN cell lines (MEN1‐KO) were established for further investigations. The absence of menin and MEN1 in pNEN cells and CRISPR/Cas9 negative control cells was confirmed at the protein level using western blot analysis and at the gene level using Sanger sequencing analysis. The final cell lines BON1MEN1‐KO and QGP1MEN1‐KO were transfected using the same synthesized sgRNA4‐lentiCRISPRv2 vector, the sgRNA sequence of which was 5′‐CACCGCATGCGCTGTGACCGCAAGA‐3′ and located at position 806–825 of the MEN1 gene (NM_000244.3) (Figure 2B). Sanger sequencing was used to verify the correct insertion of the sgRNA into the plasmid before pNEN cell lines were transfected (Figure 2C). Both BON1MEN1‐KO and QGP1MEN1‐KO showed a complete and stable absence of menin at the protein level (Figure 2D–G). At the gene level, the Sanger sequencing results for MEN1‐KO cell lines further verified the complete and stable fragment deletion of the MEN1 gene (NM_000244.3) at ~780 bp to 910 bp in BON1MEN1‐KO cells and from 763 bp onwards in QGP1MEN1‐KO cells (Figure 2H,I). At the protein level, PTN was increased in BON1MEN1‐KO but decreased in QGP1MEN1‐KO (Figure 2D–G), showing a similarity to the increased PTN expression in pNENm−p+ and decreased PTN in pNENm−p− patients (please refer to Figure 1B–D), suggesting the use of BON1MEN1‐KO and QGP1MEN1‐KO as a representative model for pNENm−p+ and pNENm−p− patients, respectively.
FIGURE 2
Design of CRISPR/Cas9 MEN1‐knockout in BON1 and QGP1 cells. (A) HEK293T cells
and HeLa cells
,
,
,
are used as a menin‐positive control. All lines HEK293T, HeLa, QGP1 and BON1 showed high menin and PTN protein expression. (B) Components of the lentiCRISPRv2 plasmid. The lentiCRISPRv2 plasmid includes a U6 promoter, sgRNA, Cas9, and puromycin‐resistance component. The primer for the U6 promoter is used for Sanger sequencing to confirm that the candidate sgRNA is inserted into lentiCRISPRv2. sgRNA is an artificial complementary sequence of ~20 bp, which is designed according to the mRNA sequence of MEN1 and helping the lentiCRISPRv2 plasmid to locate at the specific area of the MEN1 gene. The puromycin‐resistance component allows selection of plasmid‐infected cells after puromycin treatment. (C) Sanger sequencing confirms the correctly inserted sgRNA. (D–G) Western blot of both BON1MEN1‐KO and QGP1MEN1‐KO cell lines demonstrates no detectable menin protein expression in comparison with their CRISPR control (BON1Con/QGP1Con) cell lines, respectively (p < 0.05). PTN protein expression increased in BON1MEN1‐KO but is reduced in QGP1MEN1‐KO compared with their CRISPR control group (p < 0.05). NM: normal untreated pNEN cells. (H) Sanger sequencing of BON1MEN1‐KO cell line shows a 780 bp to 910 bp deletion in the MEN1 gene. (The sgRNA targeted the 806–825 bp region of the MEN1 mRNA gene.) (I) Sanger sequencing of QGP1MEN1‐KO cell line shows complete MEN1 mRNA deletion from 763 bp onward. (The sgRNA targeted the 806‐825 bp region of the MEN1 mRNA gene.)
Design of CRISPR/Cas9 MEN1‐knockout in BON1 and QGP1 cells. (A) HEK293T cells
and HeLa cells
,
,
,
are used as a menin‐positive control. All lines HEK293T, HeLa, QGP1 and BON1 showed high menin and PTN protein expression. (B) Components of the lentiCRISPRv2 plasmid. The lentiCRISPRv2 plasmid includes a U6 promoter, sgRNA, Cas9, and puromycin‐resistance component. The primer for the U6 promoter is used for Sanger sequencing to confirm that the candidate sgRNA is inserted into lentiCRISPRv2. sgRNA is an artificial complementary sequence of ~20 bp, which is designed according to the mRNA sequence of MEN1 and helping the lentiCRISPRv2 plasmid to locate at the specific area of the MEN1 gene. The puromycin‐resistance component allows selection of plasmid‐infected cells after puromycin treatment. (C) Sanger sequencing confirms the correctly inserted sgRNA. (D–G) Western blot of both BON1MEN1‐KO and QGP1MEN1‐KO cell lines demonstrates no detectable menin protein expression in comparison with their CRISPR control (BON1Con/QGP1Con) cell lines, respectively (p < 0.05). PTN protein expression increased in BON1MEN1‐KO but is reduced in QGP1MEN1‐KO compared with their CRISPR control group (p < 0.05). NM: normal untreated pNEN cells. (H) Sanger sequencing of BON1MEN1‐KO cell line shows a 780 bp to 910 bp deletion in the MEN1 gene. (The sgRNA targeted the 806–825 bp region of the MEN1 mRNA gene.) (I) Sanger sequencing of QGP1MEN1‐KO cell line shows complete MEN1 mRNA deletion from 763 bp onward. (The sgRNA targeted the 806‐825 bp region of the MEN1 mRNA gene.)
Impact of menin absence in metastasis of BON1 and QGP1 cells
To determine whether the lack of menin was associated with migration and invasion of pNEN cells, transwell migration and scratch wound‐healing assays were performed in both BON1MEN1‐KO and QGP1MEN1‐KO. In transwell migration and invasion assays, cell migration and invasion were markedly accelerated in BON1MEN1‐KO (p < 0.01; Figure 3A,B), but significantly weakened in QGP1MEN1‐KO (p < 0.01; Figure 3C,D). The scratch wound‐healing assay further confirmed that the absence of menin significantly promoted the migration abilities of BON1 (p < 0.001; Figure 3E,F), but statistically suppressed cell migration of QGP1 (p < 0.01; Figure 3G,H). Taken together, these data suggested that knockout of MEN1, accelerated cell migration and invasion in the more aggressive BON1 cells, but suppressed the abilities of migration and invasion of QGP1 cells, reflecting the different regulation of menin on metastasis of different pNEN entities.
FIGURE 3
Different impact of menin knockout on migration and invasion between BON1 and QGP1 cells. (A, B) Transwell migration/invasion assays reveal more migratory and invasive cells in BON1MEN1‐KO in comparison with BON1Con cells (p < 0.01). (C, D) In contrast, both the numbers of migratory and invasive cells are statistically reduced in QGP1MEN1‐KO compared with the QGP1Con group (p < 0.01). (E, F) Scratch wound‐healing assay demonstrates a significantly increased rate for wound healing in BON1MEN1‐KO compared with BON1Con (p < 0.001). (G, H) In contrast, QGP1MEN1‐KO has a reduced wound‐healing rate in comparison with QGP1Con (p < 0.01)
Different impact of menin knockout on migration and invasion between BON1 and QGP1 cells. (A, B) Transwell migration/invasion assays reveal more migratory and invasive cells in BON1MEN1‐KO in comparison with BON1Con cells (p < 0.01). (C, D) In contrast, both the numbers of migratory and invasive cells are statistically reduced in QGP1MEN1‐KO compared with the QGP1Con group (p < 0.01). (E, F) Scratch wound‐healing assay demonstrates a significantly increased rate for wound healing in BON1MEN1‐KO compared with BON1Con (p < 0.001). (G, H) In contrast, QGP1MEN1‐KO has a reduced wound‐healing rate in comparison with QGP1Con (p < 0.01)
Downregulation of PTN on invasion and migration of pNEN cell lines
Having seen the importance of PTN in the clinical outcome of pNEN (please refer to Figure 1), inhibition of this protein was investigated using PTN siRNA transfection in all the normal untreated pNEN cells and BON1MEN1‐KO cells (si_PTN1 and si_PTN2; p < 0.05; Figures 4A–D and 5A,B). Loss of PTN alone (using siRNA/lipofectamine) had no impact on BON1 and QGP1 cell proliferation (data not shown).
FIGURE 4
Impact of PTN siRNA silencing on migration and invasion of pNEN cells. (A–D) Western blot analysis shows normal menin, but reduced PTN, protein expression after PTN siRNA treatment of BON1 and QGP1 cells (p < 0.05). (E, F) Transwell migration/invasion assays demonstrate that cell migration and invasion of both BON1 and QGP1 are significantly reduced after PTN siRNA treatment (si_PTN1, si_PTN2) (p < 0.001). (G–J) Scratch wound‐healing assays display that cell migration of both BON1 and QGP1 are suppressed after PTN siRNA (BON1si_PTN/QGP1si_PTN) treatment compared with their negative control siRNA (BON1si_neg/QGP1si_neg) (p < 0.001)
FIGURE 5
Impact of PTN siRNA silencing on BON1MEN1‐KO cell migration and invasion. (A, B) Western blot analysis confirms the downregulation of PTN protein expression also in BON1MEN1‐KO by PTN siRNA treatment (p < 0.05). (C, D) Both transwell migration assay and transwell invasion assay show that lack of menin results in a significant enhanced cell migration and invasion of BON1MEN1‐KO compared with BONCon (p < 0.01). However, this enhanced cell migration and invasion is statistically suppressed after using PTN siRNA (BON1MEN1‐KO+si_PTN; p < 0.001). (E, F) Scratch wound‐healing assay reveals that PTN siRNA treatment on menin‐deficient BON1 cells (BON1MEN1‐KO+si_PTN) alleviated the cell migration that resulted from menin deficiency (p < 0.001)
Impact of PTN siRNA silencing on migration and invasion of pNEN cells. (A–D) Western blot analysis shows normal menin, but reduced PTN, protein expression after PTN siRNA treatment of BON1 and QGP1 cells (p < 0.05). (E, F) Transwell migration/invasion assays demonstrate that cell migration and invasion of both BON1 and QGP1 are significantly reduced after PTN siRNA treatment (si_PTN1, si_PTN2) (p < 0.001). (G–J) Scratch wound‐healing assays display that cell migration of both BON1 and QGP1 are suppressed after PTN siRNA (BON1si_PTN/QGP1si_PTN) treatment compared with their negative control siRNA (BON1si_neg/QGP1si_neg) (p < 0.001)Impact of PTN siRNA silencing on BON1MEN1‐KO cell migration and invasion. (A, B) Western blot analysis confirms the downregulation of PTN protein expression also in BON1MEN1‐KO by PTN siRNA treatment (p < 0.05). (C, D) Both transwell migration assay and transwell invasion assay show that lack of menin results in a significant enhanced cell migration and invasion of BON1MEN1‐KO compared with BONCon (p < 0.01). However, this enhanced cell migration and invasion is statistically suppressed after using PTN siRNA (BON1MEN1‐KO+si_PTN; p < 0.001). (E, F) Scratch wound‐healing assay reveals that PTN siRNA treatment on menin‐deficient BON1 cells (BON1MEN1‐KO+si_PTN) alleviated the cell migration that resulted from menin deficiency (p < 0.001)In transwell migration and invasion assays, the decreased PTN expression led to a significant reduction of cell invasion and migration in both BON1 and QGP1 (p < 0.05; Figure 4E,F). Similarly, the scratch wound‐healing assay further confirmed that a lack of PTN alone suppressed the cell migration of both BON1 and QGP1 (p < 0.001; Figure 4G–J), indicating that PTN promoted cell migration and invasion of pNEN cells.Moreover, the significant activated cell migration and invasion by lack of menin in BON1MEN1‐KO (BON1Con and BON1MEN1‐KO, p < 0.01; Figure 5C,D), was markedly decreased after PTN siRNA silencing (BON1MEN1‐KO and BON1MEN1‐KO+si_PTN; p < 0.001; Figure 5C,D), suggesting that menin impacted pNEN cell migration and invasion through regulating PTN expression. Furthermore, the scratch wound‐healing assay confirmed that the increased cell migration of BON1MEN1‐KO was abrogated by PTN siRNA (p < 0.001; Figure 5E,F), revealing that the absence of menin resulted in a more aggressive tumor biology mainly through an increase in PTN.
DISCUSSION
As MEN1 is the most frequently mutated gene in sporadic pNEN,
this study examined the loss of MEN1 coding protein menin and its consequences, particularly on its potential downstream gene PTN, both in tissues from patients with pNEN and cell lines.The relative mRNA expression of MEN1 was decreased in metastasized patients with pNEN, and, in patients with menin‐negative pNEN, PTN expression was increased and associated with metastasis and worse disease‐free survival. Similar changes were also observed in BON1 cells, where the absence of menin (BON1MEN1‐KO) led to an increase in PTN expression and subsequently to an increase in cell migration and invasion. Importantly, silencing of PTN reversed the observed effects and therefore confirmed the downstream effect of menin on cell metastasis through PTN. Importantly, no significant difference between pNENm−p+ and pNENm−p− patients was seen in regard to grading, which was classified using the Ki67 index, a proliferation marker, reflecting that PTN enabled the pNEN cells to migrate rather than to proliferate. This was confirmed by our in vitro studies that showed no differences in the proliferation assay. As resection margin (R) is an indicator for local tumor advancement or surgical quality, no association with PTN expression was expected. The combination of the absence of menin and PTN overexpression may, therefore, have the potential to predicting the metastasized clinical behavior of pNEN tumors. We here confirm one previous study showing that the absence of menin was related to a more advanced tumor stage and an increase in lymph node metastasis in gastroenteropancreatic neuroendocrine neoplasms.Whereas a recent study characterized CRISPR/Cas9‐mediated MEN1 knockout BON1 cells regarding its morphology, hormone secretion and proliferation,
this study mainly focused on their migration and invasion capability depending on menin and PTN expression and, for the first time, established a stable CRISPR/Cas9‐mediated MEN1‐knockout QGP1 cell line.Most previous studies on tumor biology of pNEN have focused on the role of menin in pNEN cell growth,
,
,
but its effect on metastasis of pNEN is mainly unknown.
This study demonstrated that the absence of menin activated the migration and invasion abilities of BON1 cells by increasing PTN expression. Similar results in previous studies on different cancer entities have demonstrated that PTN was increased after reduction of menin and led to cell migration through different regulatory factors such as integrin αvβ
in non–small‐cell lung cancer, polycomb gene Enhancer of Zeste homolog 2,
and histone H3 lysine 27 trimethylation
in lung adenocarcinoma, and protein tyrosine phosphatase (RPTP) β/ζ in melanoma.In contrast with the metastasizing behavior of pNENm−p+ patients, pNENm−p− patients showed a favorable disease‐free survival. Together with the decreased PTN protein expression in both pNENm−p− patients and QGP1MEN1‐KO cells, the biological pattern of those pNENm−p− could also be imitated through QGP1MEN1‐KO. After loss of menin, QGP1MEN1‐KO cell migration and invasion were significantly attenuated together with a decrease in PTN expression. This study shows, for the first time, differences in the effect of menin on tumor biology both in patients with pNEN and in cell lines, and explains why loss/mutation of the tumor suppressor menin/MEN1 has been observed previously, leading to contradicting difference in pNEN survival. reasons for those different effects in BON1 and QGP1 cells are most likely to be different genomic mutations
that cause different PTN responses to MEN1 mutation/absence of menin. This can be translated into patient outcome. Whereas Ohki et al.
reported that the LOH of MEN1 had no correlation with patient survival, several other studies have shown that MEN1 mutations led to a better
,
,
or to a worse survival for patients with pNEN.
,
,
The alternations of PTN expression in the absence of MEN1, on the most commonly used pNEN cell lines BON1 and QGP1, as well as in their abilities to metastasize, can be explained by the different response of PTN to MEN1 knockout. The different response might influence their microenvironments to activate different histone modifications.
Moreover, menin was also reported to regulate the downstream factors by different histone modifications in different environments.
Menin can both promote its downstream factors by catalyzing H3K4me3
and, also in contrast, suppress its downstream factor by enhancing H3K27me3.
,
In other words, menin can impair tumor progression according to its regulation of downstream factors by different modifications.
,
,
,
Additionally, previous studies have shown variable clinical outcome influenced by menin and its related co‐factors. For example, in breast cancer, menin has been described both as a tumor promoter and a tumor suppressor, depending on the expression of estrogen receptors.
Similarly, menin resulted in opposite consequences in female patients with MEN1 syndrome and pNEN with or without estrogen exposure,
as well as in resistant prostate cancer with or without androgen receptor.
Moreover, PTN was associated with the expression of several proteins or enzymes
,
,
that are displayed as different expression patterns in BON1 and QGP1,
,
,
such as MGMT,
MAP2,
and MDM.
Therefore, the molecular factors that are abundant in QGP1 but rare in BON1 cells, may interact with menin to regulate PTN expression and metastasis in patients with pNEN and in cell lines.In summary, in menin‐negative pNEN, increased PTN expression was associated with a more aggressive behavior and poor clinical outcome. In this study, for the first time, we demonstrated that the combination of menin and PTN may serve as a novel prognostic factor and as a potential therapeutic target in patients with pNEN. In addition, we speculate on the reversible direction effects of menin in primary tumor/metastasized cell types by bringing the differences in the malignant features of BON1 and QGP1 cells into perspective. However, studies involving more patient samples and the generation of available drugs targeting PTN are needed to further elucidate the presented results.
ACKNOWLEDGEMENT
None.
DISCLOSURE
No potential conflict of interest relevant to this article was reported.
AUTHOR CONTRIBUTION
Liping He and Simon Schimmack conceived the presented idea and planned the experiments. Simon Schimmack provided laboratory space and material and supervised the experiments and analyses. Liping He carried out the experiments. Steeve Boulant, Megan Stanifer, and Cuncai Guo designed and provided the initial model of the CRISPR/Cas9 cell lines. Liping He wrote the manuscript with the support of Anna Nießen, Klaus Felix, Oliver Strobel, and Simon Schimmack. Mingyi Chen performed the calculations. Frank Bergmann performed and analyzed the tissue H&E staining of the patient samples. All authors discussed the results and revised the final manuscript.
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