| Literature DB >> 35177988 |
Kailin Mao1, Xiaodan Li1, Zongde Chen1, Xiaoqian Dong1, Dongting Zhangsun1,2, Xiaopeng Zhu2, Sulan Luo1,2.
Abstract
Background and Purpose: Alcohol use disorder (AUD) is a serious public health issue and affects the lives of numerous people. Previous studies have shown a link between nicotinic acetylcholine receptors (nAChR) and alcohol addiction. However, the role of α6β2* nAChR in alcohol addiction remains obscure, and whether α6β2* nAChR can be used as a potential drug target for alcohol withdrawal need to be studied.Entities:
Keywords: ELISA; RT-PCR; alcohol withdrawal; monoamine neurotransmitters; transcriptome analysis; zebrafish; α-conotoxin TxIB; α6β2∗ nAChR
Year: 2022 PMID: 35177988 PMCID: PMC8844014 DOI: 10.3389/fphar.2022.802917
Source DB: PubMed Journal: Front Pharmacol ISSN: 1663-9812 Impact factor: 5.810
List of the primers for RT-PCR analysis.
| Gene symbols | Full gene name | Forward primer (5'∼3') | Reverse primer (5'∼3') |
|---|---|---|---|
|
| Tyrosine hydroxylase 1 | GACGGAAGATGATCGGAGACA | CCGCCATGTTCCGATTTCT |
|
| Tyrosine hydroxylase 2 | CTCCAGAAGAGAATGCCACATG | ACGTTCACTCTCCAGCTGAGTG |
|
| Dopamine beta-hydroxylase | TGCAACCAGTCCACAGCGCA | GCTGTCCGCTCGCACCTCTG |
| tph1a | Tryptophan hydroxylase 1a | TTCAAGGACAATGTCTATCG | GGGAGTCGCAGTGTTTGATG |
| tph1b | Tryptophan hydroxylase 1b | AGCCAAATGTAGAATGCGTGAA | CCACAATGTCCAGCTCGTGTC |
| tph2 | Tryptophan hydroxylase 2 | CCAGGAGTGCCTCATTACCA | TAAGTCGATGCTCTGCGTGT |
|
| Calcium channel, voltage-dependent, gamma subunit 1a | CATGGGAAAGCTGCATGGAC | GGTTGCCCTCATCTCTTCAC |
|
| Alpha-tropomyosin | CCACGCTCTCAACGACATGA | CGATGGAGAAAAGCGGCAAC |
|
| Calcium channel, voltage-dependent, L type, alpha 1S subunit, b | CAGCAGTATCTCCCTCGCTG | ACGATGTCTGCGTAAGCCAA |
|
| ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like | TTCGCTCTTTCTGTCAGTCCAA | GTAGGCCAGACATTCAGCCG |
|
| Actin alpha cardiac muscle 1b | AGTACTCCGTCTGGATCGGT | GTACGGCTGAGAGACTGAGAG |
|
| Triadin | GCTATCGCCATTGCTCTTGG | TGCGATACCAGCAGTGCTTA |
|
| Myosin, light chain 4, alkali | CCAACATGTGTCCAGGTCCA | ATCAAACACTCGCAAGCCCT |
|
| ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 | TGGGCTGCACATCTGTCATT | CAAATTGGCCGCACTTGACA |
|
| Cytochrome c oxidase subunit 6A2 | TGACCGACCCCCTTTTGAAG | AACGTTTGCCATGCAGACAC |
|
| ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 | ATACGGGACTGACCTGACCA | AGGATGGCACCAATCCACAG |
|
| Ribosomal protein L13a | AGAGAAAGCGCATGGTTGTCC | GCCTGGTACTTCCAGCCAACTT |
FIGURE 4RNA sequencing results; (A) Venn diagram of overlapped genes between control vs withdrawal (G0) and withdrawal vs withdrawal + TxIB (G2) datasets; (B) Heatmap of expression of overlapped 225 genes (“C” indicates Control group, “W” indicates alcohol withdrawal group, “T” indicates withdrawal + TxIB group); (C) Gene Ontology enrichment of overlapped 225 genes. MF: molecular function CC: cellular component BP: biological process; (D) KEGG pathway enrichment of overlapped 225 genes.
FIGURE 8KEGG map of the calcium signaling pathway. The red and green boxes indicate the up-regulated and down-regulated proteins through TxIB administration.
FIGURE 1The behavior profile of zebrafish in the open field test. Lyophilized TxIB was dissolved in normal saline solution (0.9%) and then injected at 10 μL per fish for a final concentration of 1 mg/kg using the retro-orbital injection method. The control and withdrawal groups were injected with 10 μL of normal saline solution per fish to serve as controls. (A) The diagram of the open field test with individual fish, the tank was divided into two equal virtual zones, center and periphery; (B) The max speed in the center zone; (C) The global activity in the center zone; (D) Representative trajectory chart of individual fish in the open field apparatus. Data represented as mean ± SEM (30 zebrafish per group). * indicates p < 0.05, # indicates p is between 0.05 and 0.1 (one-way ANOVA followed by Tukey’s multiple comparisons test was performed).
FIGURE 2Monoamine neurotransmitter content in the whole zebrafish brain; (A) Dopamine content; (B) 5-HT content; (C) Noradrenaline content; (D) GABA content. TxIB concentration of 1 mg/kg was used. Data are mean ± SEM of 9–13 zebrafish per group. One-way ANOVA followed by Tukey’s multiple comparisons test was performed.
FIGURE 3mRNA expression of rate-limiting enzymes in the synthesis of monoamine neurotransmitters, th1, th2 are two isoforms of the rate-limiting enzyme of dopamine synthesis, dbh is the rate-limiting enzyme of noradrenaline synthesis, tph1a, tph1b, and tph2 are three isoforms of the rate-limiting enzyme of 5-HT synthesis. TxIB concentration of 1 mg/kg was used. Data are mean ± SEM of 4 zebrafish per group. One-way ANOVA followed by Tukey’s multiple comparisons test was performed.
FIGURE 5The relative expression profile of genes enriched in the calcium signaling pathway. Data are mean ± SEM of 3 samples per group. * indicates p < 0.05, ** indicates p < 0.01 (one-way ANOVA followed by Tukey’s multiple comparisons test).
FIGURE 6Module screening (A–C) and hub gene screening (D) from Protein-protein interaction network.
FIGURE 7The expression level of genes in calcium signaling and cardiac muscle contraction pathway using RT-PCR. TxIB concentration of 1 mg/kg was used. Data are mean ± SEM of 3 samples per group. * indicates p < 0.05, ** indicates p < 0.01 (one-way ANOVA followed by Tukey’s multiple comparisons test).
Top 10 genes that were significantly regulated by TxIB administration.
| Number | Gene ID | Gene symbol | Full name | Function | Expression level (mean FPKM | ||
|---|---|---|---|---|---|---|---|
| Control | Withdrawal | withdrawal + TxIB | |||||
| 1 | ZDB-GENE-000210-33 |
| NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 | Enables nucleoside diphosphate kinase activity. Acts upstream of or within GTP biosynthetic process | 36.95 ± 14.71 | 131.84 ± 41.49 | 46.11 ± 21.36 |
| 2 | ZDB-GENE-000322-1 |
| Actin alpha cardiac muscle 1b | Predicted to be part of dynactin complex | 22.18 ± 8.47 | 109.29 ± 34.26 | 30.66 ± 11.71 |
| 3 | ZDB-GENE-040426-2128 |
| Creatine kinase, muscle b | Predicted to enable creatine kinase activity | 20.28 ± 12.00 | 106.72 ± 32.28 | 33.64 ± 16.91 |
| 4 | ZDB-GENE-030115-1 |
| Glyceraldehyde-3-phosphate dehydrogenase | Predicted to enable glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity; microtubule binding activity; and peptidyl-cysteine S-nitrosylase activity | 20.09 ± 7.48 | 80.51 ± 23.26 | 34.99 ± 14.67 |
| 5 | ZDB-GENE-000322-4 |
| Parvalbumin 2 | Predicted to enable calcium ion binding activity | 3.51 ± 2.35 | 61.77 ± 32.96 | 11.10 ± 9.14 |
| 6 | ZDB-GENE-000322-6 |
| Myosin, light polypeptide 3, skeletal muscle | Predicted to enable calcium ion binding activity | 9.52 ± 2.64 | 54.68 ± 20.91 | 16.41 ± 6.51 |
| 7 | ZDB-GENE-030520-2 |
| Troponin T type 3b (skeletal, fast) | Predicted to enable tropomyosin binding activity; troponin C binding activity; and troponin I binding activity | 9.10 ± 4.48 | 51.94 ± 20.70 | 14.81 ± 7.80 |
| 8 | ZDB-GENE-040801-9 |
| Troponin I type 2b (skeletal, fast), tandem duplicate 2 | Predicted to be involved in cardiac muscle contraction and skeletal muscle contraction | 2.43 ± 1.39 | 42.47 ± 21.87 | 8.62 ± 5.27 |
| 9 | ZDB-GENE-081124-1 |
| Myosin, heavy chain b | Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity | 1.83 ± 1.01 | 39.55 ± 10.42 | 5.19 ± 2.18 |
| 10 | ZDB-GENE-980526-109 |
| Creatine kinase, muscle a | Predicted to enable creatine kinase activity | 9.39 ± 5.57 | 47.02 ± 16.20 | 12.60 ± 5.33 |
FPKM, stands for Fragments Per Kilobase of transcript per Million mapped reads.