Chemistry can be described as the movement of nuclei within molecules and the concomitant instantaneous change in electronic structure. This idea underpins the central chemical concepts of potential energy surfaces and reaction coordinates. To experimentally capture such chemical change therefore requires methods that can probe both the nuclear and electronic structure simultaneously and on the time scale of atomic motion. In this Account, we show how time-resolved photoelectron imaging can do exactly this and how it can be used to build a detailed and intuitive understanding of the electronic structure and excited-state dynamics of chromophores. The chromophore of the photoactive yellow protein (PYP) is used as a case study. This chromophore contains a para-substituted phenolate anion, where the substituent, R, can be viewed as an acrolein derivative. It is shown that the measured photoelectron angular distribution can be directly related to the electronic structure of the para-substituted phenolate anion. By incrementally considering differing R groups, it is also shown that these photoelectron angular distributions are exquisitely sensitive to the conformational flexibility of R and that when R contains a π-system the excited states of the chromophore can be viewed as a linear combination of the π* molecular orbitals on the phenolate (πPh*) and the R substituent (πR*). Such Hückel treatment shows that the S1 state of the PYP chromophore has predominantly πR* character and that it is essentially the same as the chromophore of the green fluorescent protein (GFP). The S1 excited-state dynamics of the PYP chromophore probed by time-resolved photoelectron imaging clearly reveals both structural (nuclear) dynamics through the energy spectrum and electronic dynamics through the photoelectron angular distributions. Both motions can be accurately assigned using quantum chemical calculations, and these are consistent with the intuitive Hückel treatment presented. The photoactive protein chromophores considered here are examples of where a chemists' intuitive Hückel view for ground-state chemistry appears to be transferable to the prediction of photochemical excited-state reactivity. While elegant and insightful, such models have limitations, including nonadiabatic dynamics, which is present in a related PYP chromophore, where a fraction of the S1 state population forms a nonvalence (dipole-bound) state of the anion.
Chemistry can be described as the movement of nuclei within molecules and the concomitant instantaneous change in electronic structure. This idea underpins the central chemical concepts of potential energy surfaces and reaction coordinates. To experimentally capture such chemical change therefore requires methods that can probe both the nuclear and electronic structure simultaneously and on the time scale of atomic motion. In this Account, we show how time-resolved photoelectron imaging can do exactly this and how it can be used to build a detailed and intuitive understanding of the electronic structure and excited-state dynamics of chromophores. The chromophore of the photoactive yellow protein (PYP) is used as a case study. This chromophore contains a para-substituted phenolate anion, where the substituent, R, can be viewed as an acrolein derivative. It is shown that the measured photoelectron angular distribution can be directly related to the electronic structure of the para-substituted phenolate anion. By incrementally considering differing R groups, it is also shown that these photoelectron angular distributions are exquisitely sensitive to the conformational flexibility of R and that when R contains a π-system the excited states of the chromophore can be viewed as a linear combination of the π* molecular orbitals on the phenolate (πPh*) and the R substituent (πR*). Such Hückel treatment shows that the S1 state of the PYP chromophore has predominantly πR* character and that it is essentially the same as the chromophore of the green fluorescent protein (GFP). The S1 excited-state dynamics of the PYP chromophore probed by time-resolved photoelectron imaging clearly reveals both structural (nuclear) dynamics through the energy spectrum and electronic dynamics through the photoelectron angular distributions. Both motions can be accurately assigned using quantum chemical calculations, and these are consistent with the intuitive Hückel treatment presented. The photoactive protein chromophores considered here are examples of where a chemists' intuitive Hückel view for ground-state chemistry appears to be transferable to the prediction of photochemical excited-state reactivity. While elegant and insightful, such models have limitations, including nonadiabatic dynamics, which is present in a related PYP chromophore, where a fraction of the S1 state population forms a nonvalence (dipole-bound) state of the anion.
.[1]The electronic and nuclear
dynamics are resolved along the isomerization coordinate of the PYP
chromophore using time-resolved photoelectron imaging and electronic
structure calculations..[2]A Hückel
picture to explain the excited states of the PYP and GFP chromophores
is presented on the basis of a linear combination of the lowest unoccupied
molecular orbitals on phenolate and the para-substituted fragment..[3]This study shows how the photoelectron
emission angle for a para-substituted phenolate anion depends sensitively
on the conformation of the substituent..[4]The isomerization
dynamics in a PYP chromophore is shown to compete with internal conversion
to a nonvalence dipole-bound state of the anion, which can be clearly
identified through time-resolved photoelectron imaging.
Introduction
Light-driven processes
are common in biology and are central to
phototaxis, vision, and photosynthesis. While the biological response
involves large proteins and protein complexes, the initial photoinduced
process typically involves a small molecular chromophore that acts
as a light-sensitive transducer to mechanically initiate a large-scale
response.[5] This transduction often takes
the form of isomerization about specific bonds.[6] Understanding the initial motion and how light activates
biological function has been widely studied for many years and was
among the first processes to be studied in real time.[7] An ultimate goal is to completely understand the excited-state
dynamics taking place in the chromophore and its immediate surroundings
so that the chromophore may be adapted and controlled to drive a specific
outcome, be it more efficient transduction to mechanical motion (e.g.,
for vision) or enhanced fluorescence (e.g., for signaling or communication).
To gain such insight, studying the chromophore in isolation from the
protein environment has been very useful.[8] Using this bottom-up approach offers a window into the intrinsic
photophysics of the chromophore and is amenable to high-level calculations,
the combination of which can yield the foundational understanding
of the initial chemical dynamics. Over the years, virtually all studies
with these goals in mind have focused on how the nuclei move following
photoexcitation. However, ignoring the electronic evolution essentially
ignores the basic premise of chemistry—that the electronic
character adiabatically evolves with nuclear motion (the Born–Oppenheimer
approximation). To fully understand chemical dynamics, both the electronic
and nuclear dynamics should be probed in unison. There have been exquisite
experiments in recent years to achieve this goal, but most have focused
on very small molecular species through complex experimental methods
that are not easily extended to the size of the chromophores involved
in photobiology.[9−13] We have recently developed methods to bridge this by using time-resolved
photoelectron imaging of anions in conjunction with computational
methods. In this Account, we describe how such experiments provide
the required information and how this has offered an understanding
of the structure of biochromophores based on substituted phenolate
anions.The phenolate anion is a common motif in nature and
photoactive
proteins, with well-known examples including the green fluorescent
protein (GFP) and the photoactive yellow protein (PYP). Here, we will
focus on the latter. PYP is a protein that acts to induce negative
phototaxis in response to blue light in several bacterial organisms.[14] The chromophore of PYP is a p-coumaric acid that is commonly modeled by a p-coumaric
ketone (pCK–, Figure ).[15] PYP and its chromophore have often been used to demonstrate new
experimental methods to probe its nuclear dynamics, with examples
including time-resolved photoelectron spectroscopy,[16] fifth-order time-domain Raman spectroscopy,[17] and serial time-resolved X-ray diffraction at
free-electron lasers.[18] Here, we develop
the former of these further and show how additional differential measurements
on the photoelectrons offer concomitant insight into the electronic
evolution. In addition, we unpick the electronic structure through
the use of a simple model based on Hückel theory in which the
chromophore is built up of molecular subunits. This model offers useful
and intuitive chemical insight, especially with a view to designing
and modifying the photophysical properties of chromophores.
Figure 1
Structures
of para-substituted (with R groups) phenolate anions
considered: Ph– = phenolate, pMPh– = p-methylphenolate, pEPh– = p-ethylphenolate, pVPh– = p-vinylphenolate, pCK– = p-coumaric ketone,
and pHBDI– = p-hydroxybenzylidene-1,2-dimethylimidazoline.
Structures
of para-substituted (with R groups) phenolate anions
considered: Ph– = phenolate, pMPh– = p-methylphenolate, pEPh– = p-ethylphenolate, pVPh– = p-vinylphenolate, pCK– = p-coumaric ketone,
and pHBDI– = p-hydroxybenzylidene-1,2-dimethylimidazoline.
Photoelectron
Imaging of Anions Formed by Electrospray Ionization
Photoelectron
spectroscopy of gas-phase species determines the
binding energy of electrons in molecules. Within a Koopmans’
picture, it effectively measures the orbital energy difference between
a molecule with N and a molecule with N – 1 electrons. With the advent of charged-particle imaging
and specifically velocity-map imaging,[19] the already differential method of photoelectron spectroscopy gained
a further dimension as both the magnitude and direction of photoelectron
velocity vectors could be measured. The photoelectron angular distribution
(PAD) is sensitive to the molecular orbital from which the electron
is detached. In the molecular frame, this correlation is very well
defined. However, even in a laboratory frame, despite the averaging
that takes place over the initial orientational distributions, the
PADs retain information about the electronic structure,[20] and this information will be discussed here
for chromophores based on para-substituted phenolate anions. The PADs
are generally quantified using an anisotropy parameter, β2, which can vary from −1 to +2 for a single-photon
transition: when β2 = +2, electrons are emitted predominantly
parallel to the polarization axis of the light, ε; when β2 = −1, electrons are emitted predominantly
perpendicular to ε; and when β2 = 0, emission is isotropic.[20,21]There are some
key benefits to probing anions (rather than more
commonly studied neutral molecules). First, because the electron affinity
of a molecule is generally much lower than its ionization energy,
detaching an electron from an anion requires lower photon energies
(typically in the range of <5 eV).[22,23] Second, the
fact that the anion is charged allows for mass selection prior to
its photoelectron spectroscopy so that the sample is pure (although
isomers/conformers and isobaric species could be present). Third,
ion sources such as electrospray ionization and matrix-assisted laser
desorption can be used to generate the anions, opening up a vast range
of molecular systems that would otherwise not be possible to study
using commonly used molecular beam methods for neutral molecules.
Details of our home-built instrument that incorporates electrospray
ionization with time-of-flight mass spectrometry and velocity map
imaging have been described in detail elsewhere.[24,25]
Photoelectron Angular Distributions as a Window into Geometric
and Electronic Structure
The PYP chromophore is a para-substituted
phenolate (Figure ), and we therefore start by
considering the effect of substitution on the photoelectron spectra
and PADs. The photoelectron images and spectra of the phenolate anion
with a para-substituted methyl (pMPh–), ethyl (pEPh–), and vinyl (pVPh–) group are shown in Figure .[2] The photoelectron images (Figure (a)) were taken at hv = 2.85 eV, and ε is indicated. The only available channel for detachment
at this energy is to the ground state of the neutral molecule. In
all three cases, the photoelectron images have similar radial components.
Indeed, when extracting the photoelectron spectra from these images
(Figure (b)), the
overall spectral shape and binding energies of the photoelectron spectrum
from the three molecular anions are very similar. However, the PADs
associated with this seemingly similar detachment channel are very
different across the three systems. For the detachment from pMPh– and pVPh–, the overall emission is perpendicular to the polarization axis;
β2 is negative. In contrast, the emission for pEPh– appears to be significantly more
isotropic, implying that β2 ≈ 0. In Figure (c), β2 is extracted from photoelectron images over a series of hv to allow the evolution of β2 as a function
of the electron kinetic energy (eKE) to be extracted. Note that the
eKE axes in Figure (b) and (c) are therefore not the same, with the latter corresponding
to several measurements rather than the single measurement in the
former. These plots clearly confirm the observation of differing behaviors
(even qualitatively) of β2 for pEPh– compared to those for pMPh– and pVPh–. Data
is considered only over the first 1 eV of the continuum; beyond this,
metastable excited states of the anion (resonances) are accessed,
leading to dramatic changes in the PADs.
Figure 2
Photoelectron spectroscopy
of para-substituted phenolates. (a)
Photoelectron images of p-methylphenolate, p-ethylphenolate, and p-vinylphenolate
taken at hv = 2.85 eV with the polarization axis
shown by double arrows. (b) Corresponding photoelectron spectra. (c)
β2 parameters from individual measurements (circles)
at differing hv values and predicted (lines) by using
the Dyson orbitals shown in (d). Adapted with permission from ref (3). Copyright 2017 American
Chemical Society.
Photoelectron spectroscopy
of para-substituted phenolates. (a)
Photoelectron images of p-methylphenolate, p-ethylphenolate, and p-vinylphenolate
taken at hv = 2.85 eV with the polarization axis
shown by double arrows. (b) Corresponding photoelectron spectra. (c)
β2 parameters from individual measurements (circles)
at differing hv values and predicted (lines) by using
the Dyson orbitals shown in (d). Adapted with permission from ref (3). Copyright 2017 American
Chemical Society.Also shown in Figure (c) are the results
of computed PADs, predicted using the Dyson orbital
approach[26] within the equation-of-motion
ionization potential coupled-cluster singles and doubles formalism
(EOM-IP-CCSD). The Dyson orbital, ΨD, can be thought
of as the one-electron orbital from which the electron is removed
upon photodetachment. With a knowledge of ΨD, the
PADs can be calculated by using the eZDyson package developed by Krylov
and co-workers.[27] Details of the method
and a benchmarking study exploring its application to anions[28] have been described previously and will not
be considered further here. Importantly, in the cases considered here,
the PADs are always laboratory-frame observables. Note also that simple
symmetry arguments can be formulated to account for the overall sign
of β2, which can offer added insight without the
need for high-level calculations.[29]Figure (c) shows
that the overall predicted trends for pMPh– and pVPh– are similar and in
good overall agreement with the experimentally measured PADs. For pEPh–, the situation is more complex because
this substituent has a torsional degree of freedom. Specifically,
the ethyl group can be in the plane of the phenolate ring or perpendicular
to this plane, with the latter being the lowest-energy conformation.
The most striking observation here, however, is the sensitivity of
the PADs to this conformational freedom.[3] In Figure , the
predicted β2 trend for the in-plane conformer of pEPh– is similar to that of pMPh– and pVPh–, whereas for the out-of-plane conformer, β2 is
predicted to be slightly positive. The latter is in reasonable agreement
with experiment and in accord with this conformer being the most prevalent
in the anion distribution.[3] The conformational
differences are not apparent from the photoelectron spectra but are
very clearly apparent from the PADs. Hence, the PADs are exquisitely
sensitive to the small changes in electronic structure for these two
conformers, with ΨD for all of the relevant species
shown in Figure (d).
In contrast, the photoelectron spectra are dictated by the Franck–Condon
factors between the anion and neutral that are not sensitive to these
conformation changes.A natural extension of this work is now
to track electronic evolution
along a reaction coordinate in real time, which is described below.[1] However, we first take a detour to consider the
overall electronic structure of the PYP chromophore in the context
of a simple Hückel theory picture.
A Hückel Theory
Model for Biochromophores
In general, biochromophores have
extended polyenes (e.g., retinoids),
aromatic rings (e.g., porphyrins), or both (e.g., GFP, PYP) as their
chromophoric cores. In cases where both are present, one can view
the electronic structure of the chromophore as a superposition of
the molecular orbitals (MOs) associated with the ring and polyene.
Such a view is complementary to high-level calculations, but with
the benefit of its simplicity in terms of predicting how the electronic
structure might change through minor chemical changes and therefore
also its applicability to the broader chemical community.An
outstanding example of the success of simple Hückel approaches
was demonstrated by Bravaya et al.,[30] in
which the electronic structure of the S1 state of differently
colored photoactive proteins was rationalized through the use of a
three-centered allyl radical in a simple Hückel framework and
a particle in a box model. Utilizing a similar approach, Bochenkova
et al. interpreted the electronic structure of the S3 state
of the chromophore anion of GFP (p-hydroxybenzylidene-2,3-dimethylimidazolinone, pHBDI–) and its electronic excitation.[31]Taking inspiration, we applied a modified
Hückel model to
develop an understanding of the electronic structure of para-substituted
phenolate anions. A comparison of the photoelectron spectra of the
bare phenolate anion with pEPh– and pVPh–, discussed in the previous
section, and pCK– (PYP) and pHBDI– (GFP) provides us with bottom-up
insight into the changing excited state as a function of substitution.[2] The 2D photoelectron spectra for Ph–, pVPh–, and pHBDI– are shown in Figure (a–c). All three are broadly similar:
spectra are dominated by a feature for which the eKE increases linearly
with increasing hv. This corresponds to the direct
detachment channel discussed previously. The onset of a second direct
detachment channel (in which the neutral is left in the first excited
D1 state) is seen clearly for Ph– starting
at hv ≈ 3.2 eV. In addition to the direct
detachment features, spectral broadening is seen for all anions over
the hv range in which the signal from the high eKE
channel shifts to lower eKE (e.g., at hv ≈
3.7 eV in Figure (a)).[2] Concurrent with the spectral broadening, abrupt
changes were also observed in the PADs, indicative of a change in
the molecular orbital (MO) from which the electron is lost. Both the
broadened spectral signature and the abrupt changes in the PADs thus
point to the presence of excited states of the anion, from which the
electron is lost via autodetachment (i.e., resonances).[32−34] The locations of these excited states are indicated in Figure .
Figure 3
Two-dimensional photoelectron
spectra of (a) phenolate, (b) p-vinylphenolate, and
(c) pHDBI. Included
is the energy of the resonances associated with the phenolate LUMO
(πPh*) and the LUMO energy of the para substituent
R (πR*) along with the Hückel MOs. These combine
as a linear combination of MOs to form the MOs Ψ+ and Ψ– that are associated with the S1 and S2 excited states of the p-vinylphenolate and S1 and S3 of pHDBI. Adapted with permission from ref (2). Copyright 2017 Royal Society
of Chemistry.
Two-dimensional photoelectron
spectra of (a) phenolate, (b) p-vinylphenolate, and
(c) pHDBI. Included
is the energy of the resonances associated with the phenolate LUMO
(πPh*) and the LUMO energy of the para substituent
R (πR*) along with the Hückel MOs. These combine
as a linear combination of MOs to form the MOs Ψ+ and Ψ– that are associated with the S1 and S2 excited states of the p-vinylphenolate and S1 and S3 of pHDBI. Adapted with permission from ref (2). Copyright 2017 Royal Society
of Chemistry.Our interest is in understanding
the electronic structure of the
excited states. Consider the phenolate moiety. The lowest unoccupied
MO corresponds to a π* orbital, πPh*, and πPh* ← πPh is the lowest-energy transition
(i.e., S1 ← S0), as seen in Figure (a). Because πPh* has a node along the O and the C in the para position,
the addition of an alkyl group here does not affect πPh* (σ–π separability), and the 2D photoelectron
spectra and PADs of Ph–, pMPh–, and pEPh– are
all very similar. In the case of pVPh– and pHBDI–, the R group has its
own π system, with a corresponding empty antibonding MO, πR*. The electronic structure is now defined as a linear combination
of πPh* and πR*.For pVPh–, two resonances are
observed in Figure (b). First, consider the Hückel energy of πPh*. Given that a node encompasses the O atom, the orbital energy of
πPh* is that of the π* MO of benzene, ε
= α – β. When considering R, the C atom of the
phenyl ring should be excluded. Thus, for pVPh–, R is ethene and πR* is the π*
MO of ethene, which also has a Hückel energy, ε = α
– β. Hence, the πPh* and πR* MOs are degenerate in this simple picture, and a linear
combination of πPh* and πR* yields
the two overall MOs: Ψ± = 2–1/2πPh* ± 2–1/2 πR*. This is in excellent agreement with the observations for pVPh–, which show that the two resonances
are split by ∼0.2 eV on either side of the πPh* resonance (i.e., β ≈ – 0.2 eV) (Figure (b)). It is also in agreement
with electronic structure calculations,[2] with the molecular orbitals associated with Ψ+ and
Ψ– shown in Figure (b).The same Hückel framework
can now be scaled to any R group
to offer rather intuitive insight into the excited states of the chromophores.
We first consider the GFP chromophore, pHBDI–, in Figure (c).[35] In our model, R is 2-ethene-imidazole
(methyl groups can be neglected because they have little effect on
the π-electronic structure). The Hückel energy of πR* is ε = α – 0.35β. The resultant
Ψ+ and Ψ– MOs have a larger
separation, and their character will be dictated by the coefficients
in the linear combination. For Ψ+ (associated with
S1), the πR* coefficients will be much
larger than those for πPh*. Hence, the S1 state will have predominantly πR* character. The
higher-lying excited state associated with Ψ– will have predominantly πPh* character. These qualitative
predictions are broadly consistent with both experiment and high-level
electronic structure calculations. In pHBDI–, the S1 state is bound (i.e., it lies below the D0 level[36,37]) and indeed has predominantly
πR* character according to high-level extended multiconfigurational
quasi-degenerate perturbation theory (XMQCDPT2) calculations.[38] The excited state associated with Ψ– can also be seen in the experiment (Figure (c)) and by using computational
chemistry, but it is the S3 state because there is an additional
S2 core excited state that a simple Hückel model
cannot account for.[31] Here we focus on
S1 but note that the higher-lying states are interesting
in their own right from a photo-oxidation perspective in biomolecules.A remarkable conclusion from the Hückel picture is that
the chromophores of GFP and PYP are essentially identical! For pCK–, R is acrolein (methyl vinyl ketone
with the methyl group ignored), and in Figure , the πR* MOs of pHBDI– and pCK– are shown, demonstrating their striking similarity. The similarity
comes about because of the very small coefficients on the N atoms
in 2-ethene-imidazole, and this conclusion is in agreement with both
the high-level calculations and experiment. The S1 state
in pCK– is similarly bound, and
the S3 state can be identified with predominant πPh* character.
Figure 4
Structure and lowest unoccupied Hückel MOs of para
substituents
2-ethene-imidazole and acrolein to represent the chromophores of GFP
and PYP, respectively. Also shown are the orbital energy and the wave
function of these MOs, showing the similarity between the two.
Structure and lowest unoccupied Hückel MOs of para
substituents
2-ethene-imidazole and acrolein to represent the chromophores of GFP
and PYP, respectively. Also shown are the orbital energy and the wave
function of these MOs, showing the similarity between the two.Using the above insight and the conclusion that
the S1 state of pCK– has predominantly
πR* character, we now return to considering how the
electronic changes can be tracked along a reaction coordinate using pCK– as an example.[1]
Nuclear and Electronic Structure Simultaneously Measured along
an Isomerization Coordinate
Although single-photon photoelectron
imaging can probe the ground-state
anion as described above, an excited state can be probed in a two-color
pump–probe scheme. For pCK–, the S1 state dynamics were probed by initially exciting
with a short pump pulse at 2.79 eV (444 nm) and subsequently probed
at 1.55 eV (800 nm) by a second delayed short probe pulse. The excitation
energy was finely tuned to excite the S1 state while minimizing
direct detachment. The photoelectron image generated by the probe
is a measure of the S1 state at the time it was probed,
and its evolution can thus be tracked through the S1 + hvprobe → D0 + e– detachment channel.[1]Excitation
to the S1 state leads to a weakening of the
π system which enables isomerization. This isomerization can
proceed along either the single bond connecting the phenyl ring to
the para-substituted methyl vinyl ketone, φSB, or
along the double bond in the fragment, φDB, as shown
in Figure (a).[39]
Figure 5
Time-resolved photoelectron spectroscopy of pCK–. (a) Structure of pCK– and the bonds about which rotation can take place
in the excited-state
isomerization process. (b) Background-subtracted, time-resolved photoelectron
spectra over the first picosecond following excitation at 2.79 eV
and probing at 1.55 eV. (c) Individual photoelectron spectra at t = 0 (black) and 1 ps (blue), with green upward arrows
indicating the expected maximum kinetic energy associated with detachment
from the Franck–Condon geometry, εFC, and
the minimum following rotation about the single bond, εSB, and about the double bond, εDB. Adapted
with permission from ref (1). Copyright 2020 the authors. Published by Nature Communications
under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/.
Time-resolved photoelectron spectroscopy of pCK–. (a) Structure of pCK– and the bonds about which rotation can take place
in the excited-state
isomerization process. (b) Background-subtracted, time-resolved photoelectron
spectra over the first picosecond following excitation at 2.79 eV
and probing at 1.55 eV. (c) Individual photoelectron spectra at t = 0 (black) and 1 ps (blue), with green upward arrows
indicating the expected maximum kinetic energy associated with detachment
from the Franck–Condon geometry, εFC, and
the minimum following rotation about the single bond, εSB, and about the double bond, εDB. Adapted
with permission from ref (1). Copyright 2020 the authors. Published by Nature Communications
under a Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/.Figure (b) shows
the results of the experiment, where photoelectron spectra are presented
as difference spectra in which any small signal at t < 0 has been subtracted from all time-resolved images to leave
only the excited-state signals.[1] At eKE
< 0.05 eV, this leads to a negative signal, which arises from the
bleaching of the small contribution of direct detachment and/or autodetachment.
The main features of interest are associated with the positive photoelectron
signal at eKE > 0.2 eV because these represent the evolution of
the
S1 state. At t = 0, the photoelectron
signal peaks at eKE ≈ 1.3 eV. This then appears to decay and
form a new feature peaking at eKE ≈ 0.8 eV but additionally
shows coherence in which the population oscillates once between these
two features, before settling. At times beyond 1 ps, the high eKE
feature decays, leaving only the peak at eKE ≈ 0.8 eV, and
this subsequently decays on a time scale of ∼120 ps.[1] Here we focus on the first picosecond of the
dynamics, and two representative photoelectron spectra at t = 0 and 1 ps are shown in Figure (c).To determine which isomerization
coordinate (φSB or φDB) is probed
in the experiment, Figure shows the potential energy
curve along these two bond rotation coordinates. These were obtained
by a linear interpolation in internal coordinates (LIIC) and a recalculation
of the electronic energies of the S1 and D0 states
at all points along the LIICs using multistate XMCQDPT2, with complete
details given elsewhere.[1] Spectroscopically,
the photoelectron spectra are determined by the difference in energy
between the S1 and D0 states, which evolves
differently along the φSB and φDB coordinates. Specifically, at the Franck–Condon geometry,
FC, we expect that probing the S1 state with 1.55 eV will
lead to photoelectron signal with eKE extending to 1.40 eV. This is
in agreement with the feature seen at t = 0 peaking
at eKE ≈ 1.3 eV (Figure (c)). For the S1 state evolution about the φSB coordinate, leading to a twisted intermediate (SB), we anticipate
that the photoelectron signal would extend to eKE = 0.87 eV, which
is again in excellent agreement with the feature peaking at eKE ≈
0.8 eV in Figure (c).
In contrast, for S1 state evolution about the φDB coordinate, forming a twisted intermediate (DB), the signal
should extend to eKE = 0.21 eV. Although there is an excited state
signal observed at eKE < 0.2 eV, this arises as the probe from
SB becomes resonant with the S2 state of pCK– rather than from the detachment of DB, as shown
by excited-state calculations.[1]
Figure 6
Potential energy
curves for the S0 and S1 states of pCK– and the D0 state of the neutral
as a function of isomerization about
the single bond (SB, left) and double bond (DB, right) using a linear
interpolation of internal coordinates. Also shown are the Dyson orbitals
at the key geometries: the minimum along SB rotation, ΨD(SB), the Franck–Condon geometry, ΨD(FC), and the minimum along DB rotation, ΨD(DB).
Vertical upward arrows indicate photoexcitation/detachment using the
pump/probe pulse; downward arrows indicate the energy of the emitted
electrons, with the maximal electron kinetic energies, ε, along
the key geometries indicated. Adapted with permission from ref (1). Copyright 2020 the authors.
Published by Nature Communications under a Creative Commons Attribution
4.0 International License http://creativecommons.org/licenses/by/4.0/.
Potential energy
curves for the S0 and S1 states of pCK– and the D0 state of the neutral
as a function of isomerization about
the single bond (SB, left) and double bond (DB, right) using a linear
interpolation of internal coordinates. Also shown are the Dyson orbitals
at the key geometries: the minimum along SB rotation, ΨD(SB), the Franck–Condon geometry, ΨD(FC), and the minimum along DB rotation, ΨD(DB).
Vertical upward arrows indicate photoexcitation/detachment using the
pump/probe pulse; downward arrows indicate the energy of the emitted
electrons, with the maximal electron kinetic energies, ε, along
the key geometries indicated. Adapted with permission from ref (1). Copyright 2020 the authors.
Published by Nature Communications under a Creative Commons Attribution
4.0 International License http://creativecommons.org/licenses/by/4.0/.On this basis, we conclude that
the photoexcited S1 state
of pCK– initially isomerizes about
φSB. This agrees with our calculations[1] and others’[39,40] calculations
that find a barrier along the φDB coordinate. Our
experiment shows that the nuclear wavepacket along this coordinate
partially returns to the planar geometry once before dephasing.While the above arguments are solely based on energy arguments,
our measurements also provide information about the electronic structure
along the isomerization pathways. By analogy to the above case of pEPh–, rotation of the para-substituted
fragment out of the plane of the ring may be expected to result in
changes in the PADs.[3]Figure (a) shows the evolution of
β2 as a function of both eKE and t (which relates directly to spectral changes in Figure (b)). In Figure (b) and (c), β2(eKE) is
plotted at t = 0 and 1 ps, with the regions with
high photoelectron signals shown as solid lines. We compare these
to the predicted β2 from the relevant Dyson orbitals,
which are shown in Figure .
Figure 7
Time-resolved β2 spectra. (a) False color plot
of β2 as a function of kinetic energy and time, which
is directly comparable to the photoelectron signal in Figure (b). Slices of β2 spectra taken at (b) t = 0 ps (black solid
line) and (c) t = 1 ps (blue solid line). Also shown
on these is the predicted β2 spectrum from the Dyson
orbitals for the key geometries in Figure . For t = 0 ps (b), this
is comparable to the Franck–Condon geometry. For t = 1 ps (1), this is comparable to either SB rotation or DB rotation,
with SB matching the data significantly better. Adapted with permission
from ref (1). Copyright
2020 the authors. Published by Nature Communications under a Creative
Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/.
Time-resolved β2 spectra. (a) False color plot
of β2 as a function of kinetic energy and time, which
is directly comparable to the photoelectron signal in Figure (b). Slices of β2 spectra taken at (b) t = 0 ps (black solid
line) and (c) t = 1 ps (blue solid line). Also shown
on these is the predicted β2 spectrum from the Dyson
orbitals for the key geometries in Figure . For t = 0 ps (b), this
is comparable to the Franck–Condon geometry. For t = 1 ps (1), this is comparable to either SB rotation or DB rotation,
with SB matching the data significantly better. Adapted with permission
from ref (1). Copyright
2020 the authors. Published by Nature Communications under a Creative
Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/.At t = 0, we
expect that the detachment will be
from the S1 state in the FC geometry, so we use this Dyson
orbital, ΨD(FC), to calculate the β2(eKE), as shown in Figure (b). The overall agreement is very good and can be made even
more convincing when we account for the initial motion on S1 that takes the FC geometry to a planar minimum on S1 (PM)
prior to isomerization.[41] As before, we
consider both φSB and φDB coordinates
leading to the SB and DB intermediates. The ΨD of
these coordinates differ, so we might anticipate that their PADs will
also differ. In Figure (c), we compare β2 computed from both Dyson orbitals
with the experimental β2 at t =
1 ps. The β2 for SB is in much better agreement than
that for DB, which is consistent with the conclusions from the photoelectron
spectra. Hence, while the photoelectron spectra capture the nuclear
evolution of the S1 state, the PADs clearly capture the
electronic evolution. Taken holistically, we have therefore monitored
the evolution of electronic character along a reaction coordinate,
which is of course the basis of the Born–Oppenheimer approximation
and the underpinning concept of a potential energy surface.The predicted β2 in Figure assumed a random spatial distribution of
laboratory-frame molecules. In principle, photoexcitation to the S1 state could result in a prealigned distribution that is due
to a defined transition dipole moment vector. Such alignment would
be observable through higher-order anisotropy parameters (i.e., β4 in the present case), but these were found to be near zero,
indicating that no substantial prealignment was present in these experiments,
justifying the use of the one-photon β2 parameter.We now briefly consider how our observations tie into the simple
Hückel picture presented previously. We suggested that the
S1 state of pCK– could
be viewed as a linear combination of πPh* and πR*, where R represents methyl vinyl ketone (or acrolein). The
Hückel energy of πR* is α – 0.38β
(compared to α – β for πPh*),
so we expect that the S1 state pCK– will have predominantly πR* character.
Because the para bond is not directly involved in these considerations,
it should come as no great surprise that there is little or no barrier
to rotation about φSB. Then, once rotation sets in,
the πPh* and πR* MOs become decoupled
and the S1 electronic structure evolves to have almost
exclusively πR* character in the SB geometry. Indeed,
β2 predicted for the πR* fragment
is in excellent agreement with that for the SB structure. Hence, the
adiabatic evolution effectively involves a charge transfer from a
delocalized MO of the FC geometry to a localized MO on the methyl
vinyl ketone fragment. This evolution is primed by virtue of the πR* character of the FC S1 state as explained by
the Hückel picture. This conclusion is pleasing because it
suggests that simple Hückel theory arguments can be extended
to excited states and their dynamics!Of course, the Hückel
approximations are drastic and have
their limitations. One obvious limitation is nonadiabaticity, which
is ultimately how the S1 state decays to the ground electronic
state of pCK–. However, other nonadiabatic
processes can take place, as we have observed in an experiment on
the related chromophore in which the ketone is replaced by an ester, pCEs–.[4] In
this case, excitation to the analogous S1 state revealed
a bifurcation of the wavepacket, with some population remaining on
S1 and isomerizing (as seen in pCK–) and with another fraction nonadiabatically converting
to a nonvalence dipole-bound state. While the time-resolved measurements
capture these dynamics fully, evidence for the interplay of nonvalence
states in the excited-state dynamics of anions can also be seen in
the single-photon photoelectron spectra of many anions.[42−44] Indeed, we have now seen the internal conversion from valence states
to nonvalences states (and vice versa) in a range of molecular and
cluster anionic system,[45−49] where the excited state is close in energy to the detachment threshold.
Why we see only the dipole-bound state in pCEs– and not in pCK– remains unknown. The interest in anion nonvalence states is growing
because they are also implicated in electron capture processes and
may be important even in condensed phases.[50]
Conclusions and Outlook
The ability to probe both electronic
and nuclear dynamics simultaneously
has been one of the key goals of chemical dynamics. Here, we have
done this on a relatively large biomolecule using a combination of
established methods based on time-resolved photoelectron imaging as
a detection method. The experimental method has much scope moving
forward. Specifically, progressing to larger systems is straightforward
using electrospray ionization. Although this will inevitably come
with enhanced complexity of the results, gas-phase spectroscopy offers
tools to attain exquisite control of the initial samples. For example,
the temperature can be tuned from a few tens to hundreds of Kelvin
using cryogenic ion traps,[51] isomers can
be preselected using ion mobility methods,[52] specific modes can be pre-excited using light fields, surroundings
can be introduced in a systematic and incremental manner, and the
spectral/time resolution can be improved (at the expense of time/spectral
resolution).[53] On the theoretical front,
the computation of the PADs remains difficult. At present, there is
no consideration of the spread of configurations of the nuclei, although
we have recently shown that the effects of internal motion due to
temperature or dynamical effects can influence the computed PADs significantly.[28] Finally, it is worth noting that there is still
no robust way to compute the PADs for electron emission from resonances.
Nevertheless, it is notable how well the electronic and nuclear dynamics
can be tracked and correlated with computational results, offering
much hope that these methods can also begin to offer new insights
into more complex systems and nonadiabatic dynamics as well as the
predominantly adiabatic dynamics discussed here.We finish by
marveling at the extent to which the underlying photodynamics
of a biochromophore can be decomposed and understood using intuitive
chemical models based on Hückel theory, which offers simple
tools to be exploited by general chemists to develop the photoactive
protein toolbox.
Authors: O Gessner; A M D Lee; J P Shaffer; H Reisler; S V Levchenko; A I Krylov; Jonathan G Underwood; H Shi; A L L East; D M Wardlaw; E T H Chrysostom; C C Hayden; Albert Stolow Journal: Science Date: 2005-12-15 Impact factor: 47.728
Authors: Jason Tenboer; Shibom Basu; Nadia Zatsepin; Kanupriya Pande; Despina Milathianaki; Matthias Frank; Mark Hunter; Sébastien Boutet; Garth J Williams; Jason E Koglin; Dominik Oberthuer; Michael Heymann; Christopher Kupitz; Chelsie Conrad; Jesse Coe; Shatabdi Roy-Chowdhury; Uwe Weierstall; Daniel James; Dingjie Wang; Thomas Grant; Anton Barty; Oleksandr Yefanov; Jennifer Scales; Cornelius Gati; Carolin Seuring; Vukica Srajer; Robert Henning; Peter Schwander; Raimund Fromme; Abbas Ourmazd; Keith Moffat; Jasper J Van Thor; John C H Spence; Petra Fromme; Henry N Chapman; Marius Schmidt Journal: Science Date: 2014-12-05 Impact factor: 47.728